Tuber melanosporum: GSTUM_00002415001
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Entry
GSTUM_00002415001 CDS
T01282
Name
(RefSeq) hypothetical protein
KO
K03265
peptide chain release factor subunit 1
Organism
tml
Tuber melanosporum
Pathway
tml03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
tml00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
GSTUM_00002415001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tml03019
]
GSTUM_00002415001
03012 Translation factors [BR:
tml03012
]
GSTUM_00002415001
Messenger RNA biogenesis [BR:
tml03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
GSTUM_00002415001
Translation factors [BR:
tml03012
]
Eukaryotic type
Release factors
GSTUM_00002415001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
eRF1_2
eRF1_3
eRF1_1
baeRF_family10
acVLRF1
Motif
Other DBs
NCBI-GeneID:
9185296
NCBI-ProteinID:
XP_002836207
INRA:
GSTUM_00002415001
UniProt:
D5G7A5
LinkDB
All DBs
AA seq
434 aa
AA seq
DB search
MSQAQANDAEKNIEIWKVKKLIKRLTEARGNGTSMISLIIPPKDQISRAAKMLAEEYGTA
SNIKSRVNRLSVLSAITSTQQRLKLYPRVPPNGLVVYCGEIITSEGKERKINIDFEPFKP
INTSLYLCDNKFHTEALSELLESDSKFGFIVMDGNGALFGTLSGNTRDIVHKFSVDLPKK
HGRGGQSALRFARLREEKRHNYVRKVAELAVQNFITADKVNVSGLILAGSADFKSELAQS
ELFDQRLQTKIIKVVDVSYGGENGFNQAIELASETLSNVKFIQEKKLIGRYFDEISQDSG
RICYGVDDTLKALELGACETLIVFENLDITRWTLKPSSGAPVIIHTTKLQEQNRQQFMDK
GSGQEMEIVEQISFLEWLAEKYKDFGANLEFVSDRSGEGNQFVKGFGGIGAMLRYKVNFE
QLADIDDEDEYYDG
NT seq
1305 nt
NT seq
+upstream
nt +downstream
nt
atgtcacaagctcaggcaaacgatgccgagaagaacattgagatctggaaggttaagaag
ctcattaagcgccttaccgaggcgaggggcaatggtacaagcatgatttccctcatcatt
ccgccgaaggatcagatttctcgggctgcaaagatgttggctgaagaatatggcaccgcc
tctaatatcaaatccagagtcaatcgtctttccgtcttgtccgccatcacctcgacccag
caacgtttgaagttgtaccccagggtcccaccgaacggactggtggtctactgtggcgaa
ataatcacgagtgagggcaaggagcgcaagattaacatagatttcgaacctttcaagcca
atcaacacctcactgtatctctgcgacaacaagttccacaccgaagctctgtcggagctc
cttgaatccgacagcaagttcggtttcatcgtgatggacggtaatggtgctcttttcgga
actcttagcggtaacacgcgggacattgttcacaagttctctgtcgatctcccgaagaag
cacggccgtggtggtcaatctgcacttcgttttgcccgtctcagggaagagaaacgacac
aactacgttcggaaagtagccgagttggccgtgcagaacttcatcaccgctgacaaggtt
aacgtttccggcttgattcttgctgggtcggcagatttcaagtccgagcttgcccagagt
gagctgttcgatcagaggttgcagaccaagatcatcaaggttgttgacgtttcgtatggt
ggggaaaatgggtttaatcaggctatcgagctggcatccgagacgctcagcaatgtcaaa
tttattcaggagaagaagttgattggcaggtactttgacgagatctctcaggatagcggg
aggatctgctatggtgtcgacgataccttgaaggcattagagctcggtgcttgcgagact
ctcatcgtgttcgagaatcttgacataactcgctggaccctcaagccctccagtggagcc
ccggtaattattcacaccaccaagcttcaggaacagaaccggcaacagttcatggacaag
ggttcgggccaagagatggaaatcgtggaacaaatctccttcctggaatggctagcggag
aagtacaaggattttggtgcaaatctcgaattcgtatccgacaggtccggagaaggcaat
cagtttgtcaagggctttggtggcattggcgcaatgcttaggtacaaggtcaactttgaa
caacttgctgatattgatgacgaggacgaatactacgatggttag
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