Tuber melanosporum: GSTUM_00002510001
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Entry
GSTUM_00002510001 CDS
T01282
Name
(RefSeq) hypothetical protein
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
tml
Tuber melanosporum
Brite
KEGG Orthology (KO) [BR:
tml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tml03016
]
GSTUM_00002510001
Enzymes [BR:
tml01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
GSTUM_00002510001
Transfer RNA biogenesis [BR:
tml03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
GSTUM_00002510001
Prokaryotic type
GSTUM_00002510001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-GeneID:
9185275
NCBI-ProteinID:
XP_002836186
INRA:
GSTUM_00002510001
UniProt:
D5G784
LinkDB
All DBs
AA seq
454 aa
AA seq
DB search
MTDTNDSSKAFLLPPDPSPAIDAPAGDQTVPSGSNSTRAKDNRARHHDGRGRGSSSSCSK
RKKQDQGRTAYKRNRDSKWEPRNSEARRPKKKVAVLIGYCGTGYRGMQLNPPHKSIESDL
FEAFVQAGAISKANSDDPKKSSLVRCARTDKGVHAAGNVISLKLIIEDPDITEKINSYLP
EQIRVWGIVRTVGSFSSYHQCDSRRYEYLVPSHCFIPPHPKSYLAKKTYRISPKRLQRVR
EGFRSYEGTHNFHNFTIQKTFNDPSSKRFIKSFEVLDPIIINNTEWLSLRVHGQSFMMHQ
IRKMVGMVMMVVRTGCPLERIKEACGPRVVSIPKAPSLGLLLESPVFDAYNRKAERDFQK
EPIDFSKYAKEIGAFRDKMIYTKLFEEEERAHVFTQFVHFIDSFKSPLFHYLTSAGLKAL
DGVGGEEGAKTVDLQLLPDNESEDEDAAKSAEAG
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atgaccgataccaatgattcttcaaaagcttttctccttcctccggacccgagtcccgca
attgacgctcccgcgggcgaccaaaccgtgccttccggcagcaactcgacgagggccaag
gataatcgagcccgacaccacgatggtcgcgggcgcggcagcagtagctcatgctccaaa
aggaagaaacaagaccagggcaggacggcgtataagcgcaatagagattctaaatgggag
cctaggaattccgaggctaggaggcctaagaagaaggttgccgtgctgattgggtattgt
gggaccgggtatcgggggatgcagttaaatcctccacataaaagtattgagagtgatttg
tttgaagctttcgtacaggctggggctatttctaaagctaattcggatgatcctaagaag
tcatcactggttcggtgcgcacgtacagataaaggtgtccatgcagccggcaacgtcata
tcgttaaaactcatcattgaggaccccgatatcacggagaagataaattcttatctccct
gagcagattagagtttgggggatcgttcgtacagttgggtctttcagctcatatcaccaa
tgtgatagtagacgatacgagtatctagttccgtcgcattgctttataccaccccatcca
aagagttatttggccaagaagacttaccggatatctcctaagaggttacaaagggtccgg
gaagggtttagatcttatgaagggactcacaattttcacaacttcacgatccagaaaacc
ttcaatgatcctagctccaagaggtttatcaagtcgtttgaggtgctagatccaataatt
atcaacaatactgagtggttgtccctgcgcgttcacggccaatcttttatgatgcaccaa
attcgtaaaatggtaggcatggtaatgatggtcgtccggaccggttgcccccttgagcgt
atcaaggaggcatgcggacctcgagtagtatctataccaaaagcacccagtctaggactt
cttttagaatctccagtcttcgatgcttataatagaaaagctgaacgagactttcagaaa
gagcctatagacttctctaaatatgctaaggaaataggtgccttccgggataaaatgata
tataccaagctgtttgaggaggaagagagagctcacgtatttacacaattcgtccacttt
attgactcgtttaagtcaccattgttccactaccttacgtctgctgggctgaaggccttg
gacggggtagggggggaagagggcgccaaaacggtggacttgcagttattacccgataac
gaatccgaggatgaggatgctgccaaatctgcagaagctggatag
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