Tuber melanosporum: GSTUM_00002678001
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Entry
GSTUM_00002678001 CDS
T01282
Name
(RefSeq) hypothetical protein
KO
K03136
transcription initiation factor TFIIE subunit alpha
Organism
tml
Tuber melanosporum
Pathway
tml03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
tml00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
GSTUM_00002678001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tml03021
]
GSTUM_00002678001
Transcription machinery [BR:
tml03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIE
GSTUM_00002678001
Prokaryotic type
Archaeal type
TFE
GSTUM_00002678001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIE_alpha
Zn_Ribbon_TF
BUD22
Zn_ribbon_4
zf-C2H2_6
RIM2a_ZnF
zf-H2C2_2
Motif
Other DBs
NCBI-GeneID:
9181425
NCBI-ProteinID:
XP_002836415
INRA:
GSTUM_00002678001
UniProt:
D5G7W3
LinkDB
All DBs
AA seq
454 aa
AA seq
DB search
MEIAKSLVKCVARAFYDTKHILVLDALMIHNAVRDDELGKLLGFQSKDLQKLCGRLKEDR
MLAVHNRPEQKEGQQRPTNRTYYYVEFRSTIDAVKYRMHGVVKDVEKKMNKDADTKGYVC
PYCQKRFSILDAMSVARDEMGLFVCDRCNTTLVDDDDSAEVKTSQERLGRLMEQMKKIID
MLKMIDEIVVPVNDFETAIANSVPVPRDKNHLYSVPVAGKGATSTRSSGAPASIEVSFTS
TSEKTAAELASEQAMKQAQAEKNALPVWHTKSTVDPGATTTAGAKEAAEREARALDGIGI
AQKSKEEEGKKAAASNGANGIQADAIAEYYAALAAQKAKEAQEEQEDDDDDEEEEDGEEG
ARGIGGGRHEEEEEDEGEDDDEDDDDEGNFEDVVNSNAFTPPTATNSIKVKDDDSDDDST
APAAKKPRLTETEDKEEGGEEDSDEEADFEDLKL
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atggaaatcgcaaagtccctcgtaaagtgtgtagctcgtgccttttacgatacaaagcat
attcttgtcctcgatgccctcatgatccataacgctgttcgcgatgatgagctggggaaa
ttgttgggctttcaatctaaggacttacaaaaattatgcgggaggctgaaggaagatcgc
atgctcgctgtgcataatcggccagaacagaaggaagggcaacagcgaccgacaaaccgg
acttactactacgttgagttcaggagcacaatcgacgctgtcaagtatcgcatgcacggc
gttgtcaaggacgtggagaagaagatgaataaggacgctgacacaaaaggatatgtatgt
ccatactgccagaagaggttctcaatcctggatgcgatgtcggtggctcgcgatgagatg
gggctgtttgtttgcgatcggtgtaatactacacttgtggatgacgatgatagcgccgag
gtcaaaacaagtcaggagcggttggggagactaatggagcagatgaagaagattattgat
atgctaaagatgattgacgagatcgttgtgccggttaatgatttcgagaccgccattgcg
aattctgttcctgtgcctcgagataagaatcacctctactcagtccccgtcgctgggaaa
ggcgccacgagcacccgaagctccggagcccctgcttccatcgaagtttctttcacttcc
acctcggagaagacagctgctgagcttgcctcagagcaggcgatgaagcaagcccaggct
gagaagaacgcacttccggtctggcacaccaagtctaccgttgaccccggcgctacgacc
accgctggggccaaggaggctgcggaaagggaagctcgtgccctcgatggtattggaatt
gcgcaaaagtccaaggaggaggaaggcaagaaagctgctgccagtaacggggcgaatggc
attcaggcagacgctatcgctgaatattatgccgcattggcagcccagaaggccaaggaa
gcccaggaggagcaagaagatgatgatgacgacgaagaggaagaagacggtgaggagggg
gcgcgggggattgggggtgggcggcacgaggaggaagaagaagacgagggtgaggacgac
gatgaggacgacgatgacgaaggaaactttgaagacgttgtcaatagcaacgctttcact
cctcctactgctacgaattcaattaaggttaaggatgatgactcagatgatgactccacg
gcccccgctgctaaaaaaccaaggcttactgagactgaggacaaagaagaaggcggagaa
gaggactccgatgaggaggctgactttgaggacctgaaattgtag
DBGET
integrated database retrieval system