Tuber melanosporum: GSTUM_00002894001
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Entry
GSTUM_00002894001 CDS
T01282
Name
(RefSeq) hypothetical protein
KO
K18422
helicase MOV-10 [EC:
5.6.2.5
]
Organism
tml
Tuber melanosporum
Brite
KEGG Orthology (KO) [BR:
tml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tml03019
]
GSTUM_00002894001
03036 Chromosome and associated proteins [BR:
tml03036
]
GSTUM_00002894001
Enzymes [BR:
tml01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.5 RNA 5'-3' helicase
GSTUM_00002894001
Messenger RNA biogenesis [BR:
tml03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
GSTUM_00002894001
Chromosome and associated proteins [BR:
tml03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Other miRNA pathway proteins
GSTUM_00002894001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_12
AAA_11
AAA_19
AAA_30
UvrD-helicase
ResIII
DEAD
MOV-10_beta-barrel
T2SSE
AAA
PhoH
AAA_16
Motif
Other DBs
NCBI-GeneID:
9186056
NCBI-ProteinID:
XP_002836645
INRA:
GSTUM_00002894001
UniProt:
D5G8I9
LinkDB
All DBs
AA seq
1106 aa
AA seq
DB search
MSPPTPLRIVPPSPLASQAAGYVPNTSHTPLSSTSQALPTTAMSYAMVAKCNNAPTFPSG
VFQPPLSRTPQQASLPHNAQQHRQQQGIAMHPPQPFRPNPLQPPFSPSSQLTPGASSSSP
KPWQPDVYTLPFIPHYLQAINTLPAVLVASLPAPSIPYHSFISSFCGSTFLRPLPPAPAV
PPVPSASVPVPSSDLTPTIYSKYFFNLLSHELSAQHTEFRKYDLFNVPIYVQEPSQSLYR
LDVPGIREDNPPVLLGDVVKLRQVRQPGYMGMGGTFTGYQYDACVYGMDKTVGYIVLRVD
HLVLESGRFNVCFVVQEKQWTGATRAIEDLGAELRGTGSREVAEGAKGNGVEANNRPGVF
VRRMLFPGKEDGIWQTTLSRGVFKRRWFDRELNYEQQKAVDTILQQNYGNVPYLISGPPG
TGKTKTIVEVALQLIFTPSNPKHHILLCAPSQEAADTLALRLVPYLNPRVLFRLQSSTRT
FPEVPSELLPYSHIANDMFSLPEWKKLMGFRVVVCSTRDAEILVEARCTNKDLARWEKSV
FDSLRGIGDESDGNDPTASGVVEKGQIVNVHWTALLLDEAAQGIEPEVAVAVSVVVPPEE
ASVDRPIFVMAGDQRQLGPRTVSRVPQLDMSLFERLFLRELYSQHPLARQSFTHAYKQSP
RVWSAERILERKKALLPYLRPPFTNLIRNYRSHPAILAVPSALFYNDTLVPEASNTNYLE
GWSGWKGRRGIPVKFCLNGGMDEWHEEGVSFYNLREIKIACNIAKNLVSSGLIAPHEISI
MAQFREQIRRLRRALRSPDYNLRDVNVGPIESYQGSEHRFVIVCTTRSRERFLEGDLERG
LGVIFENRRVCVAMTRAKQGLIVIGNPWILGRDPIWRAWMGFCWRHNSVEKDFFEEEEED
KAFDPQANEKDVMLGDEDSQPNRENPPLPNGHSNHTSGKLPAITELKVNNWQPPEDERET
PQYISRLETALVYRSRVNNGYTGALGAVHGGFDEDDPMWTAGIVAEEAVRGGIGNRDLLE
PTAGTGMPWPHLLDNTHSVDGSLQGLTRRDSSEEEGVDGEGAGADADKQAEPAARIGKNK
KGFSEVKATETTQTSLFLAGPGKLWG
NT seq
3321 nt
NT seq
+upstream
nt +downstream
nt
atgtctcctccaaccccactgcgtattgttcctccctctcccctagcttcacaagccgca
ggttacgtccccaatacctcccacacacctctttcatcgacgtcgcaagctctgcccacc
acagcaatgtcatatgccatggtggctaagtgcaacaatgcacctacttttccctcggga
gttttccagcctcccttatcacggaccccgcagcaggcatcgctgccacacaatgctcaa
caacaccgccaacagcaaggcatcgcaatgcatccacctcaaccttttcgtccgaatccc
ctccagccccccttcagcccttcgagtcaactgacgccaggagccagctcctcctcccca
aaaccctggcagccggatgtttatactctccccttcataccgcattatctgcaggcgatc
aatacactccctgctgtgcttgtcgcctctctgccggcaccttccattccttaccactct
ttcatatcttcattttgcggttcaacatttctaaggcctctgccgcccgctcctgctgtt
cctccagtgccgagcgcgtccgtaccggtaccatcgtcggacctcacgccaacaatatat
tctaagtactttttcaatcttctatcccacgagctttcagcgcaacacacggaatttcgg
aaatacgacctttttaatgtcccgatttatgtccaggaaccatctcagagcctttatagg
cttgacgtcccaggcatccgagaagataatcctccagtactgctaggggatgtagtaaag
cttagacaagtcagacaaccaggctacatggggatgggaggtaccttcactggatatcaa
tacgatgcctgcgtttatggtatggataaaactgtcgggtacattgttcttagggtggat
catttggtgcttgaatcaggacgctttaatgtttgtttcgttgtccaggaaaagcaatgg
actggggctaccagagctattgaggacctgggagcagagctcaggggaactggctccaga
gaggtggccgagggcgctaagggtaacggagtcgaggcaaataacagacccggggtattt
gtaagacgaatgttattccccgggaaggaagacgggatctggcagacgacgcttagtagg
ggagtatttaaacggcggtggttcgatagggaattgaattatgagcaacagaaagcagtc
gataccattcttcagcaaaactacggaaacgttccatacctgatctcagggcctccagga
acagggaaaacgaagactattgtggaagtggcattgcaactcatcttcacaccctccaat
ccaaagcatcacattctcctctgtgcgccatcacaggaggctgcagatactcttgccttg
cgtttggttccgtatctgaaccctagggttttgtttcgtcttcagtcgagtaccagaacc
tttcccgaggtgccttctgaattgttgccttattctcacatagcgaatgatatgttctca
ctgccggaatggaaaaagctgatggggtttagagtggttgtctgttccacaagagatgca
gagatattagtagaggctaggtgtactaacaaggatttagcaaggtgggagaagagtgtt
tttgattcgttgaggggaattggagatgagagcgatggcaatgacccaacggccagtgga
gtggtggagaaagggcagatcgtaaatgttcactggacagccctgctactggatgaagcg
gcgcaaggtatcgaaccggaagtcgcagttgcagtttctgttgtagtacccccggaggaa
gctagcgttgataggccaatttttgtcatggcgggtgatcagaggcagttgggaccaaga
actgtcagcagggtaccacagcttgatatgagtctgtttgagaggctttttttacgagag
ctttacagccagcatccgttggctaggcaaagctttacgcatgcttacaagcagagccct
cgggtatggagtgcggagagaattctagagaggaagaaggcattactgccgtatctccgc
ccgccgtttacgaatttaattcggaattaccgctctcatccagcaattctggctgtacca
agcgctctcttctacaatgacactctggtccctgaggcgtcaaatacgaattatctagag
gggtggtctggatggaagggtaggagagggatccccgtgaaattctgtcttaatggaggg
atggatgaatggcatgaagagggggtctcgttttacaacctccgcgagataaaaattgcc
tgcaatatcgcgaaaaatcttgtttcgtctggactcattgcaccccatgaaatttctatc
atggcacaattcagagagcaaattcggcgtctaagaagagcgcttcggtcgccagattac
aatcttcgggacgtgaatgtcggccctattgagagctatcaaggtagcgaacataggttt
gttatagtttgcactactaggtctcgtgaacgatttctagagggagaccttgaaaggggt
ctaggcgtaatatttgaaaacagaagagtctgtgtagctatgacgcgggcgaaacaagga
ttgatcgtcattgggaatccctggatcttgggaagagatcctatctggagagcctggatg
gggttctgctggcgtcacaattctgtggagaaggactttttcgaagaggaagaggaagat
aaggctttcgatccccaagcgaacgagaaggacgtgatgcttggggacgaggactctcaa
cccaacagggaaaatccaccactccctaatggccactcaaatcacaccagtggaaagttg
ccagcgataacggagctgaaagtcaacaattggcagccgcctgaggatgaaagagagacg
ccgcagtatatcagtcgtttggagaccgctttggtgtatagatccagagtaaataatggc
tatactggcgcgcttggggctgttcatggtggttttgatgaggatgatccaatgtggacc
gcaggaattgtggcagaggaagccgttagagggggtatcggaaatagggatctcctggaa
ccaacagcaggaaccggtatgccatggccgcacctcctagacaacacccactctgtagac
gggagcttgcagggcttgactaggagggattctagcgaagaagagggagtggatggtgag
ggggccggggcggatgcggataagcaggcggagcctgcggcaaggatagggaagaataaa
aagggcttcagtgaagtcaaggccacggaaacgacgcagacgtcgctgtttttggcgggg
ccggggaaactgtgggggtga
DBGET
integrated database retrieval system
