Tuber melanosporum: GSTUM_00002910001
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Entry
GSTUM_00002910001 CDS
T01282
Name
(RefSeq) hypothetical protein
KO
K12843
U4/U6 small nuclear ribonucleoprotein PRP3
Organism
tml
Tuber melanosporum
Pathway
tml03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tml00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
GSTUM_00002910001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tml03041
]
GSTUM_00002910001
Spliceosome [BR:
tml03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
GSTUM_00002910001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRP3
Prp3_C
Carbam_trans_N
Motif
Other DBs
NCBI-GeneID:
9188313
NCBI-ProteinID:
XP_002836520
INRA:
GSTUM_00002910001
UniProt:
D5G868
LinkDB
All DBs
AA seq
570 aa
AA seq
DB search
MASMIPSKRPPEEDPSISSKKPKQGVDQERIQKMLAEARARAAAVAAKLNNNARASAPSS
ASPTPPPAPPPPAAQSAADRIAAMRARVSGAVSRSSGLAAGGPPRPPLSAYRREEPDIEE
ASKARGGLDVGLHPALLGDGGDAGSAKRGKGGIPPKFATTMANRRAKGKSGKKQLEIQGP
SADMTDPTKNPYFDPNLASKVVAPRRISKALAFNQKGKYIEQANALRRQAALEAMKKRIA
EAARKVGIDEDMHADKAFAREPPPEIEWWDQGLTTAPSYETITPESLLISAADTIVTHYV
QHPVLLAPPQDQLAPPMKPFPLTKKEQKKVRRQRRAEALKEKQAKVRLGLEPPPPPKIKK
SNLMRVLGEEAVKDPTAVEARVNREIKERHEGHLKANEERKLTKQQRHEKLAANQEKDLA
RGIHVLVFRIETLANGRHRYKININAEQLALTGICILNPKFNLVIVEGGIHSITKFRKLM
VNRIDWKESITARERIKGVEGDAGAEEEGQAVDMTKNMCTLVWEGEVRQKGFKRFTTERV
PSDALARERLERAKMEYMWTQTKNAVAKEG
NT seq
1713 nt
NT seq
+upstream
nt +downstream
nt
atggcctcgatgatcccctctaagcggcccccagaagaggacccctcaatctcgtccaaa
aagccaaagcagggagttgaccaagaacgcattcaaaagatgctagcggaagcccgtgcc
cgtgcagcagccgtcgccgcaaagctaaacaacaatgccagggcgtctgccccatcctcc
gcatccccaacacccccgccggcaccaccacctcccgccgcacaatccgccgctgacagg
atcgctgcaatgagggctcgtgtgtctggagccgtatccagatcctccggactcgcggca
ggcgggccacccaggccgccgctgagtgcgtacaggagggaagagccggacatcgaggag
gcatccaaggcgcgtggcgggctggatgtgggacttcaccccgcgctgctaggcgatggt
ggggacgcaggatcggcaaagcgtgggaagggggggattccaccaaagtttgcaactacc
atggcgaatcggcgggcgaaggggaagtccggaaagaagcagctggagattcagggcccc
tcggcggatatgacggatcccaccaagaatccctactttgatccgaatcttgcgtcgaag
gttgttgcgccccggaggattagcaaagctttggcgttcaatcagaaggggaaatacatt
gagcaggcaaatgctctgcgtagacaagctgctctggaggctatgaagaaaaggattgcg
gaggcggccaggaaggtggggattgatgaggacatgcacgcagataaggcatttgctcgt
gaaccaccccctgaaattgagtggtgggaccaaggcctcacaactgctccctcatacgag
acaataaccccagaatccctcctaatatctgctgccgacacaatagtaactcactacgtc
caacacccggtcctccttgccccaccacaagaccagcttgcgccgccaatgaaacccttc
cccctgaccaaaaaagagcaaaagaaagtccgccgccaacgccgcgccgaagccctgaaa
gaaaagcaagcaaaagtccgcctcggcctagaacccccaccgccgccgaagatcaagaaa
tcaaacttaatgcgagttctcggagaagaagccgtgaaagaccccacggcagtggaagca
cgcgtgaaccgtgaaatcaaagaacgtcacgagggccacttgaaagcgaacgaagagcgc
aaactaacgaaacaacaacgccacgaaaaactcgctgcgaaccaggagaaggacctagcc
cgtggcatccacgtcctcgtcttccgcatcgagacgttagcgaacgggagacataggtac
aagatcaacatcaacgcggagcaattagccttgacggggatctgcattctcaatccgaaa
ttcaacctcgttattgtagagggcgggatccactccatcacaaagttccgtaaattgatg
gtgaacaggatcgactggaaggagagcatcaccgctagagaacggattaaaggtgtcgag
ggcgatgcaggggccgaggaagaagggcaggcggtcgacatgacgaaaaatatgtgcacg
ctggtctgggagggcgaggtccgccagaaggggtttaagaggtttactactgagcgagtg
cccagtgatgcgttggctagggagcggttggagagggccaagatggagtatatgtggact
cagactaagaatgctgttgcgaaggagggttag
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integrated database retrieval system
