KEGG   Tuber melanosporum: GSTUM_00002911001
Entry
GSTUM_00002911001 CDS       T01282                                 
Name
(RefSeq) hypothetical protein
  KO
K12868  pre-mRNA-splicing factor SYF2
Organism
tml  Tuber melanosporum
Pathway
tml03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:tml00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    GSTUM_00002911001
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:tml03041]
    GSTUM_00002911001
Spliceosome [BR:tml03041]
 Complex B
  Other components
   Prp19-related factors
    GSTUM_00002911001
 Complex C
    GSTUM_00002911001
SSDB
Motif
Pfam: SYF2
Other DBs
NCBI-GeneID: 9188314
NCBI-ProteinID: XP_002836521
INRA: GSTUM_00002911001
UniProt: D5G869
LinkDB
AA seq 282 aa
MPKRKVPPTEMSSESIAPGPRHSKLSESESTDASDAAATPESSDAAQKTKERAERWNALK
CRAKKSAEVNRKEVYAERRRQAVDPSETSRLNRKRDEAEFKLAKAEAEDDGEDFERKRAW
DWTIEESERWDKRMEKKKKHVEDVAFQADYTQTARKIYKKQLRELQPDLESYAAEKAKLI
RDGTIVETEDGELIAVDRDGEFYADTNSLGFIDNKPSKGAVDRLVGDLKKAEDARMRRRK
GGDEEDVTYINDKNKQFNQKLARYYNKYTGEIRDSFERGTMV
NT seq 849 nt   +upstreamnt  +downstreamnt
atgcccaagaggaaagtgccacccaccgaaatgtcatcagaatcgatcgctcccggacct
cgtcactccaaactctcagagtccgaatccaccgacgcttcagacgcagcggcaacccca
gaatcctccgatgccgctcaaaaaactaaagagcgtgccgaacgctggaatgctctaaaa
tgccgtgctaaaaaatccgccgaagtaaaccgcaaagaagtctacgccgagcgtcgccgt
caagccgtagatccttcagaaacctcccggctcaaccgcaagcgcgacgaggcggaattc
aaacttgccaaggccgaagcagaagatgacggggaggactttgagcgaaagagagcgtgg
gactggaccattgaagagagcgaacgttgggataaacgcatggagaagaaaaagaagcat
gttgaggacgttgctttccaagcagactacacccagaccgcccgcaaaatctacaagaag
cagctccgcgaattacaacccgatctcgaatcctacgccgccgagaaagcaaagttaatc
cgcgacgggaccattgtcgagaccgaggatggagaattgatcgccgtggatcgcgatggg
gagttctacgccgacaccaactcccttggcttcattgataacaagcccagcaaaggcgcc
gtcgataggttagtcggcgaccttaagaaagccgaagatgcccgcatgcgcaggcgcaag
ggcggcgatgaggaggatgtgacctacatcaatgataagaataagcagtttaatcagaag
ttggcgaggtactataataagtatactggggagattagagatagctttgagagaggtact
atggtttag

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