Tuber melanosporum: GSTUM_00002911001
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Entry
GSTUM_00002911001 CDS
T01282
Name
(RefSeq) hypothetical protein
KO
K12868
pre-mRNA-splicing factor SYF2
Organism
tml
Tuber melanosporum
Pathway
tml03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tml00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
GSTUM_00002911001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tml03041
]
GSTUM_00002911001
Spliceosome [BR:
tml03041
]
Complex B
Other components
Prp19-related factors
GSTUM_00002911001
Complex C
GSTUM_00002911001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SYF2
Motif
Other DBs
NCBI-GeneID:
9188314
NCBI-ProteinID:
XP_002836521
INRA:
GSTUM_00002911001
UniProt:
D5G869
LinkDB
All DBs
AA seq
282 aa
AA seq
DB search
MPKRKVPPTEMSSESIAPGPRHSKLSESESTDASDAAATPESSDAAQKTKERAERWNALK
CRAKKSAEVNRKEVYAERRRQAVDPSETSRLNRKRDEAEFKLAKAEAEDDGEDFERKRAW
DWTIEESERWDKRMEKKKKHVEDVAFQADYTQTARKIYKKQLRELQPDLESYAAEKAKLI
RDGTIVETEDGELIAVDRDGEFYADTNSLGFIDNKPSKGAVDRLVGDLKKAEDARMRRRK
GGDEEDVTYINDKNKQFNQKLARYYNKYTGEIRDSFERGTMV
NT seq
849 nt
NT seq
+upstream
nt +downstream
nt
atgcccaagaggaaagtgccacccaccgaaatgtcatcagaatcgatcgctcccggacct
cgtcactccaaactctcagagtccgaatccaccgacgcttcagacgcagcggcaacccca
gaatcctccgatgccgctcaaaaaactaaagagcgtgccgaacgctggaatgctctaaaa
tgccgtgctaaaaaatccgccgaagtaaaccgcaaagaagtctacgccgagcgtcgccgt
caagccgtagatccttcagaaacctcccggctcaaccgcaagcgcgacgaggcggaattc
aaacttgccaaggccgaagcagaagatgacggggaggactttgagcgaaagagagcgtgg
gactggaccattgaagagagcgaacgttgggataaacgcatggagaagaaaaagaagcat
gttgaggacgttgctttccaagcagactacacccagaccgcccgcaaaatctacaagaag
cagctccgcgaattacaacccgatctcgaatcctacgccgccgagaaagcaaagttaatc
cgcgacgggaccattgtcgagaccgaggatggagaattgatcgccgtggatcgcgatggg
gagttctacgccgacaccaactcccttggcttcattgataacaagcccagcaaaggcgcc
gtcgataggttagtcggcgaccttaagaaagccgaagatgcccgcatgcgcaggcgcaag
ggcggcgatgaggaggatgtgacctacatcaatgataagaataagcagtttaatcagaag
ttggcgaggtactataataagtatactggggagattagagatagctttgagagaggtact
atggtttag
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