Tuber melanosporum: GSTUM_00002916001
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Entry
GSTUM_00002916001 CDS
T01282
Name
(RefSeq) hypothetical protein
KO
K14571
ribosome biogenesis ATPase
Organism
tml
Tuber melanosporum
Pathway
tml03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
tml00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
GSTUM_00002916001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tml03009
]
GSTUM_00002916001
Ribosome biogenesis [BR:
tml03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
GSTUM_00002916001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
AAA_lid_3
RuvB_N
AAA_5
AAA_16
AAA_22
TIP49
AAA_33
AAA_28
RNA_helicase
AAA_14
NPHP3_N
nSTAND3
AAA_17
AAA_2
Mg_chelatase
ABC_tran
AAA_18
Parvo_NS1
NACHT
TsaE
Rad17
IstB_IS21
NB-ARC
Sigma54_activat
AAA_3
Viral_helicase1
Sigma54_activ_2
DUF815
Vps4_C
Cytidylate_kin2
SUV3_C
Motif
Other DBs
NCBI-GeneID:
9188319
NCBI-ProteinID:
XP_002836526
INRA:
GSTUM_00002916001
UniProt:
D5G874
LinkDB
All DBs
AA seq
703 aa
AA seq
DB search
MLTMAGNRQSLNKGLERRVLAIVRRYIDEHSVTEGNNGSLYLSVSKVYPYVTTDRSMTRQ
RRRNLEKMIEKALATVRGEEAKADGLDSDLGEIEELNEEDLIGLKQSNTVNQQVADSTIP
TSPAPQKRRERWPAKDGEPTKRQKQDNSREPPKNICLKNIGGREEVINDLLEFIAMPLAH
PEVNLHTGVQPPCGVLLHGPPGCGKTMLANAIAREVGLPFIAISAPSIVSGVSGEPEKML
RELFEEARGIAPCLMFMDEIDAITQKRDNTQRDMERRIVAQMLTCMDDLALEKTGGKPVM
IIGATNRPDSLDPALRRAGRFDKEIYLGVPDEVGREKILRILCEKLRLIGDFDFKKLAKK
TAGFVGADLSALAREAGMSGSLSSIQCFLRAHPHRLTRKQLDPLYITFPDFLTGLTRIQP
SSKREGFATVPDVTWADVGALESHKAELQMAIVLPIKKPELFASVGLTAPSGVLLWGPPG
CGKTLLAKAIANESGANLISIRGPELLNKYIGESERAVRQVFSRAQASIPCIIFFDELDA
LAPHRNDNLSESSSRVVNTLLTELDGFNDRKGIYIIAATNRPDMIDPSILRPGRLDTLLL
EILKTITKKTPLSNNVDLRAIAEHSRCKNFSGADLAALVKRATTLALRESCFIGVGEVEE
GKNQVVVTMEHFEKASANIRPSVSEDRREQYQELATTFGSEGQ
NT seq
2112 nt
NT seq
+upstream
nt +downstream
nt
atgctcacaatggccggcaacaggcaatccttgaataaagggcttgaacgaagggtgctt
gctatagttcggaggtatattgacgaacattcagttactgaaggaaataacggctctctg
tatttgtcggtctcgaaggtttacccatatgttaccacggacaggagtatgacaaggcag
aggagacggaatctagagaagatgattgaaaaggccttagccacagtacgaggtgaagag
gctaaggccgatggtctggatagtgacttaggtgagattgaggaactgaatgaagaggac
ctgatagggctgaagcaatcgaacacggttaatcagcaagtagctgacagcaccatacct
acatcgccggcaccccaaaaacgaagggaacgctggccggccaaagatggagaaccaaca
aaacgtcagaaacaagacaactctcgcgagccacccaagaacatctgcttgaagaatatt
ggcggcagagaagaggtcatcaatgatcttttagagttcatcgccatgcctctagcccac
ccagaagttaacctacatactggagtgcagcccccttgcggtgtacttctccatggacca
cctggctgcggaaaaactatgctagcaaatgctattgccagagaggttgggctaccattt
attgctatttccgcaccctcaattgtatcgggagtgtctggagaaccggaaaagatgctt
cgggaactttttgaggaagctcggggaatagccccttgcttaatgtttatggatgaaata
gacgctataacacagaagagggacaacacccagcgggatatggagagaagaattgttgcc
cagatgttgacctgtatggacgatctcgcattggagaagactggtgggaaacctgtcatg
atcattggagcaacaaaccgacccgacagcctagatccagcattgagaagagctggaaga
tttgataaggaaatttaccttggtgtgccagatgaagttggaagagagaagatcttgagg
atactatgtgagaagttgaggttaataggggattttgacttcaaaaaattggccaaaaaa
actgccgggttcgttggagctgatctaagtgctttggccagagaggccggcatgtcaggg
tctctaagctcgattcaatgtttccttcgcgcacacccacatcgacttactcgaaagcaa
ttggatccactctatataacgttcccagattttttaaccggccttacgaggattcaaccg
tcttccaaaagagagggttttgcaacagtccctgatgttacctgggcggatgttggggcc
ctggagtcacataaggctgaattgcagatggccattgtgctgccaatcaagaagccggaa
ctttttgctagtgtggggctcactgcgccgtccggagtacttctttggggccctccaggg
tgtggtaagaccttgctggcaaaggccattgcaaatgagagtggtgcaaatctcattagc
atccggggtccggaattgcttaacaagtacatcggagaatcagaacgggccgtccgacag
gttttctcgcgagcccaagcttccattccttgtattatcttttttgatgaattggatgct
ctagctcctcatcgtaatgacaatctttcggagtcctcttctcgtgtagtcaatactctt
ctcactgaattagatggcttcaatgaccgcaagggaatctatattattgcagcaactaat
agacccgatatgattgatccgtcaatactcagaccagggagattggatacacttttatta
gagattttgaaaactatcacaaaaaagacaccgctctccaacaacgtcgatttaagggct
attgcagagcatagtaggtgtaaaaatttcagtggcgctgatctagcggcattggtgaaa
cgggccacgactctagctcttcgagagtcctgcttcataggagttggtgaagttgaggaa
ggcaaaaaccaagtagtggtcacaatggagcatttcgaaaaggcatccgcaaacatcagg
ccttcagtatcggaggatcgtagagagcagtatcaggagttggcaactacatttggttcg
gaggggcagtag
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integrated database retrieval system
