Tuber melanosporum: GSTUM_00002917001
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Entry
GSTUM_00002917001 CDS
T01282
Name
(RefSeq) hypothetical protein
KO
K14571
ribosome biogenesis ATPase
Organism
tml
Tuber melanosporum
Pathway
tml03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
tml00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
GSTUM_00002917001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tml03009
]
GSTUM_00002917001
Ribosome biogenesis [BR:
tml03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
GSTUM_00002917001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
AAA_lid_3
RuvB_N
AAA_16
AAA_5
TIP49
RNA_helicase
AAA_33
Mg_chelatase
AAA_28
AAA_22
AAA_17
nSTAND3
AAA_18
NPHP3_N
Parvo_NS1
NACHT
IstB_IS21
ABC_tran
TsaE
Rad17
AAA_14
NB-ARC
Sigma54_activat
AAA_7
AAA_3
AAA_25
Sigma54_activ_2
Zeta_toxin
Viral_helicase1
DUF815
Cytidylate_kin2
AFG1_ATPase
Motif
Other DBs
NCBI-GeneID:
9188320
NCBI-ProteinID:
XP_002836527
INRA:
GSTUM_00002917001
UniProt:
D5G875
LinkDB
All DBs
AA seq
560 aa
AA seq
DB search
MASPAPQKRKERRPVEDGELVKRQKQNNSREPPKDISLQDIGGREEVVDDLLKFMTMPLT
HPEVYLHTGVDLPHGVLLHGPPGCGKTMLANAIAREVGLPFIAFSAPSIVSGISGESEMK
LRKLFEEAREIAPCLMFMGEIDAITQKRDNTQRDMERRIVAQVLTCMDDLALEKTGGKPV
MIIGATNRPDSLDPALRRAGRFDKEIYLGVPDEVGREKILRILCEKLRLIGDFDFKKLAK
KTAGFVGADLSALAREAGMVAMRRIYEILGNPSAATDPLEQLDPLYITFPDFLTALTKTQ
SLAKREGLATVPDVTWADVGALESHKAELQMAIVLPIKKPELFASVGLTAPSGVLLWGPP
GCGKTLLAKAIANESGANFINIRGPEFINKHFGELEWAVRHVFSLARASIPCVIFFDELG
ALAPRHDDSSSEPSSRPVDTLLTELDGLNDCKGIYIVAATNKPDFIDPVILKPGRLDKLW
FVDLPNAEGRLEILKILTKKIPLFNVDLRAIAESDRCENFSGADLAVLVREAASLAIQKA
SLVDIVEVEEAGVSATSVPI
NT seq
1683 nt
NT seq
+upstream
nt +downstream
nt
atggcatcgccggcaccccagaaacgaaaggaacgccggccggtcgaagatggagaatta
gtaaagcgtcagaaacagaacaactctcgcgagccacccaaggacatctccctgcaggac
attggcggcagagaagaggttgtcgacgatcttttgaagtttatgactatgcctctaacc
cacccagaggtttaccttcatactggagtggacttgcctcacggtgtacttctccatgga
ccacctggctgcggaaaaactatgctagcaaatgctattgccagagaggttgggctacca
tttattgccttttccgcaccctcaatcgtatcaggaatatcgggagaatcggaaatgaag
ctaaggaaactttttgaggaagcacgggaaatagccccttgcttaatgtttatgggtgaa
atagacgctataacacagaagagggacaacacccagcgggatatggagagaagaattgtt
gcccaggtgttgacctgtatggacgatctcgcattggagaagactggtgggaaacctgtc
atgatcattggagcaacaaaccgacccgacagcctagatccagcattgagaagagctgga
agatttgataaggaaatttaccttggtgtgccagatgaagttggaagagagaagatcttg
aggatactatgtgagaagttgaggttaataggggattttgacttcaaaaaattggccaaa
aaaactgccgggttcgttggagctgatctaagtgctttggccagagaggccggcatggta
gcaatgagacgaatctacgaaatccttggaaatccatcggcggctactgaccctttggag
caactggatccgctctatataacgttcccagattttttaaccgcccttacgaaaacccaa
tctttagctaagagagagggtcttgcaacggtccctgatgttacctgggcagatgttggg
gctctggagtcacataaggctgaattgcagatggccattgtgctgccaatcaagaagccg
gaactttttgctagtgtggggctcactgcgccgtccggagtacttctttggggccctcca
gggtgtggtaagaccttgctggcaaaggccattgcaaatgagagtggggcaaatttcata
aacatccggggtccggaatttattaataagcacttcggagaactagagtgggctgtccgt
catgttttctcactcgcccgagcttccattccatgtgttatcttttttgatgagttgggc
gccctggctccccgccacgatgatagttcctcagaaccctcttctcgtccagtcgatact
cttctaactgaattggatggcctcaatgattgcaagggaatctatatcgttgcggcaact
aataaaccagacttcattgatccagtaatactcaaaccaggaaggttagataagctttgg
tttgtggaccttccaaatgccgagggaagattagagatcctgaaaattctcacgaaaaag
atacccctctttaacgtcgatttaagagctattgcagagagtgacaggtgtgaaaatttt
agcggcgctgatctggcggtgctggtaagggaggccgcgagtctggctattcagaaggct
agcttggtagatatcgttgaagttgaggaagcgggggtgtcggcgacctctgttccaatt
tga
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