KEGG   Tuber melanosporum: GSTUM_00002952001
Entry
GSTUM_00002952001 CDS       T01282                                 
Name
(RefSeq) hypothetical protein
  KO
K03504  DNA polymerase delta subunit 3
Organism
tml  Tuber melanosporum
Pathway
tml03030  DNA replication
tml03410  Base excision repair
tml03420  Nucleotide excision repair
tml03430  Mismatch repair
tml03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:tml00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    GSTUM_00002952001
   03410 Base excision repair
    GSTUM_00002952001
   03420 Nucleotide excision repair
    GSTUM_00002952001
   03430 Mismatch repair
    GSTUM_00002952001
   03440 Homologous recombination
    GSTUM_00002952001
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:tml01009]
    GSTUM_00002952001
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:tml03032]
    GSTUM_00002952001
   03400 DNA repair and recombination proteins [BR:tml03400]
    GSTUM_00002952001
Protein phosphatases and associated proteins [BR:tml01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     GSTUM_00002952001
DNA replication proteins [BR:tml03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   DNA polymerase delta complex
    GSTUM_00002952001
DNA repair and recombination proteins [BR:tml03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     DNA polymerase delta complex
      GSTUM_00002952001
   MMR (mismatch excision repair)
    DNA polymerase delta complex
     GSTUM_00002952001
SSDB
Motif
Pfam: CDC27
Other DBs
NCBI-GeneID: 9188350
NCBI-ProteinID: XP_002836557
INRA: GSTUM_00002952001
UniProt: D5G8A5
LinkDB
AA seq 413 aa
MLYEFHRCHKKNNESIYATYIITGELKVIEEAGGDEDEDEDMSGSPFEITPRENKEKFRY
QKIVRLVGEERLEEVKAEIENIKTVHVYSLGPSRIRDLCVLSACSERVRSEFVYEDEQAA
GRVYGMIVNHLAIKAPRPIRPPVRPHAMAIPTASKANEKAGTKEKAEAKSNPDTKTKAKH
EPETKIEKKPAPAQMKRSQSTTKAAQKRQGPSNLFTSWSNASNKKAESNPSSTAHSPKTE
EVSVRMDLDSEEESDSELTLLRDAAEDARKRREKYDELTKMMEMSDDDEDIKPKPKRRVK
EEVSEEEEEEAEEIQEVETPPESKPVELPTGSVVNAVTEGGRRRGRRKVNKKIQVKDEDG
YLVTKFEPAWESFSEEEPAPKPKPKPKTAPKSKKKNAGPVTGQGSINSYFFKK
NT seq 1242 nt   +upstreamnt  +downstreamnt
atgctctacgagtttcacaggtgtcataagaagaataatgagagtatctatgctacctac
atcatcaccggcgagctgaaggtcattgaagaggccgggggtgatgaggacgaggatgag
gatatgagcgggagcccctttgagattacgccgcgggaaaataaggagaagtttaggtat
cagaagattgtcaggttggttggtgaggagagactcgaagaagttaaagccgaaattgaa
aatatcaagaccgttcatgtttatagtcttggaccgagtaggattagagatttgtgtgtg
ttgtcagcttgctctgagagggttcgctcggaattcgtttacgaggatgaacaggctgcg
gggagagtctacggcatgatagttaatcatctggcgatcaaagccccaagacccatcaga
cccccagttagaccgcacgccatggctatcccgacagcgtcgaaggccaatgagaaggct
ggaacgaaggaaaaagctgaagccaagtcgaacccggatacgaagactaaggcgaaacat
gaacctgagaccaaaatagagaagaagcctgctcctgctcagatgaagcgttctcaatcg
acaactaaagctgcgcagaagagacagggaccttctaatctgtttacttcatggagtaat
gcttccaacaagaaggcagaatccaatccttcttcaaccgcgcatagtcctaaaactgag
gaagtctcagtcagaatggatcttgatagtgaagaagagagtgattctgaacttactctt
cttagagatgctgctgaagatgccagaaagagaagagagaaatacgatgaacttactaaa
atgatggagatgagtgatgatgatgaagatatcaaacccaagcctaaaaggagagtaaag
gaagaagtgagtgaggaagaggaagaagaagcggaagaaattcaagaagttgaaacgccc
ccagaaagcaagcctgtcgaactccctactggcagtgttgtgaacgctgtcaccgaaggc
gggagaagacgcgggaggagaaaggtcaacaaaaagatccaagttaaggatgaggatggg
tatctcgtcacaaagtttgaacctgcgtgggaatccttttcagaagaggagcctgcgcca
aagcctaagccgaagcccaagactgctccaaagagtaaaaagaaaaacgcaggacctgtg
actgggcaagggagtatcaactcttactttttcaaaaagtaa

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