Tuber melanosporum: GSTUM_00002952001
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Entry
GSTUM_00002952001 CDS
T01282
Name
(RefSeq) hypothetical protein
KO
K03504
DNA polymerase delta subunit 3
Organism
tml
Tuber melanosporum
Pathway
tml03030
DNA replication
tml03410
Base excision repair
tml03420
Nucleotide excision repair
tml03430
Mismatch repair
tml03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tml00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
GSTUM_00002952001
03410 Base excision repair
GSTUM_00002952001
03420 Nucleotide excision repair
GSTUM_00002952001
03430 Mismatch repair
GSTUM_00002952001
03440 Homologous recombination
GSTUM_00002952001
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
tml01009
]
GSTUM_00002952001
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tml03032
]
GSTUM_00002952001
03400 DNA repair and recombination proteins [BR:
tml03400
]
GSTUM_00002952001
Protein phosphatases and associated proteins [BR:
tml01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
GSTUM_00002952001
DNA replication proteins [BR:
tml03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase delta complex
GSTUM_00002952001
DNA repair and recombination proteins [BR:
tml03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase delta complex
GSTUM_00002952001
MMR (mismatch excision repair)
DNA polymerase delta complex
GSTUM_00002952001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CDC27
Motif
Other DBs
NCBI-GeneID:
9188350
NCBI-ProteinID:
XP_002836557
INRA:
GSTUM_00002952001
UniProt:
D5G8A5
LinkDB
All DBs
AA seq
413 aa
AA seq
DB search
MLYEFHRCHKKNNESIYATYIITGELKVIEEAGGDEDEDEDMSGSPFEITPRENKEKFRY
QKIVRLVGEERLEEVKAEIENIKTVHVYSLGPSRIRDLCVLSACSERVRSEFVYEDEQAA
GRVYGMIVNHLAIKAPRPIRPPVRPHAMAIPTASKANEKAGTKEKAEAKSNPDTKTKAKH
EPETKIEKKPAPAQMKRSQSTTKAAQKRQGPSNLFTSWSNASNKKAESNPSSTAHSPKTE
EVSVRMDLDSEEESDSELTLLRDAAEDARKRREKYDELTKMMEMSDDDEDIKPKPKRRVK
EEVSEEEEEEAEEIQEVETPPESKPVELPTGSVVNAVTEGGRRRGRRKVNKKIQVKDEDG
YLVTKFEPAWESFSEEEPAPKPKPKPKTAPKSKKKNAGPVTGQGSINSYFFKK
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
atgctctacgagtttcacaggtgtcataagaagaataatgagagtatctatgctacctac
atcatcaccggcgagctgaaggtcattgaagaggccgggggtgatgaggacgaggatgag
gatatgagcgggagcccctttgagattacgccgcgggaaaataaggagaagtttaggtat
cagaagattgtcaggttggttggtgaggagagactcgaagaagttaaagccgaaattgaa
aatatcaagaccgttcatgtttatagtcttggaccgagtaggattagagatttgtgtgtg
ttgtcagcttgctctgagagggttcgctcggaattcgtttacgaggatgaacaggctgcg
gggagagtctacggcatgatagttaatcatctggcgatcaaagccccaagacccatcaga
cccccagttagaccgcacgccatggctatcccgacagcgtcgaaggccaatgagaaggct
ggaacgaaggaaaaagctgaagccaagtcgaacccggatacgaagactaaggcgaaacat
gaacctgagaccaaaatagagaagaagcctgctcctgctcagatgaagcgttctcaatcg
acaactaaagctgcgcagaagagacagggaccttctaatctgtttacttcatggagtaat
gcttccaacaagaaggcagaatccaatccttcttcaaccgcgcatagtcctaaaactgag
gaagtctcagtcagaatggatcttgatagtgaagaagagagtgattctgaacttactctt
cttagagatgctgctgaagatgccagaaagagaagagagaaatacgatgaacttactaaa
atgatggagatgagtgatgatgatgaagatatcaaacccaagcctaaaaggagagtaaag
gaagaagtgagtgaggaagaggaagaagaagcggaagaaattcaagaagttgaaacgccc
ccagaaagcaagcctgtcgaactccctactggcagtgttgtgaacgctgtcaccgaaggc
gggagaagacgcgggaggagaaaggtcaacaaaaagatccaagttaaggatgaggatggg
tatctcgtcacaaagtttgaacctgcgtgggaatccttttcagaagaggagcctgcgcca
aagcctaagccgaagcccaagactgctccaaagagtaaaaagaaaaacgcaggacctgtg
actgggcaagggagtatcaactcttactttttcaaaaagtaa
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