Tuber melanosporum: GSTUM_00002997001
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Entry
GSTUM_00002997001 CDS
T01282
Name
(RefSeq) hypothetical protein
KO
K18752
transportin-1
Organism
tml
Tuber melanosporum
Pathway
tml03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
tml00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
GSTUM_00002997001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tml03019
]
GSTUM_00002997001
03009 Ribosome biogenesis [BR:
tml03009
]
GSTUM_00002997001
Messenger RNA biogenesis [BR:
tml03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
GSTUM_00002997001
Ribosome biogenesis [BR:
tml03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
GSTUM_00002997001
Pre-60S particles
GSTUM_00002997001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HEAT_EZ
HEAT
HEAT_2
TOR1L1_N
HEAT_EF3_N
Cnd1
Vac14_Fab1_bd
Arm
IBN_N
Adaptin_N
MCM_WH_arc
Motif
Other DBs
NCBI-GeneID:
9186223
NCBI-ProteinID:
XP_002836664
INRA:
GSTUM_00002997001
UniProt:
D5G8L2
LinkDB
All DBs
AA seq
913 aa
AA seq
DB search
MAWQPEEAPIRELAGYLKDSLNRYNQAAQRHASEMLQQASQSPDINNYLCYILVHPNPPP
DMAVAEYHVVRCSAGVLLKNNILSSGRALAPAFIDYIKSELLLGLRDPHHQIRNYTGNVI
TELLRIGGVMSWTDMLAQLISLVENTDGNTTPETQEGAMGALLKVCQDSKDELDEEYDGY
RPLNILIPKFLLFTQHPVPKVRMQALEIVNIYLPMKTQSILVHIDTLIESLFRLGNDADT
GVRREVCRALVHLVDIRADKIAPHMQGIVDYMLAQQKNTEEQDLALDAAEFWLTVGEHEH
LRIGLGPYLSEIVPVLLASMVYSEEDRARLGGGGDDADVEDRAEDIRPNFAKSKQRLPNG
EKIDEEYDSEDDAYAGMDDPEDRWNLRKCSAAALDVLATVFHQSVFQTILPYLKENIRHP
EWPYREAAVLALGAVADGCLEGVVPHLPDLIPYLISLLDDPEPLVRQITCWTLGRYSRWA
SHLENPADKQKYFEPMMGGILNKMLDGNKRVQEAGASAFANLEEQSKDLLKPYIEPIVRQ
FVVAMGRYKDRNMFILYDCIQTLAEHVGSILAEKPLVDILMPALINRWKLVKDDSRELFP
LLECLSYVATALGREFAPFAGPIFLRCINIIHQNLELQMAYNNDRALDQPDKDFLVTSLD
LLSAVIQALDSTSAELVSGTTPPFFQLLTVCMADPSNDVKQSSYALLGDCAIYVFEQLHP
FLPNIMDLLIQQLGIQSLSDAESDTGYSVVNNACWSCGEIALKQGSGMAPYVEKLYNRLV
KIIQRPEIPSSVTENAAVALGRIGIGSCDELAPHLESFAYPFLDALQKVAETDEKDTALK
GFCMVVGRNPEAMESCLVPFFRAIARYKHASPELSALFRQTLIGYKSFITDFDLFMSAIP
APDREALKSRYAI
NT seq
2742 nt
NT seq
+upstream
nt +downstream
nt
atggcgtggcaaccggaagaggcacccataagggagttggcgggctatctcaaagatagc
ttgaacagatacaatcaagctgctcaacggcatgccagcgagatgctacaacaagccagt
caatccccagatatcaacaactacttgtgctacatcctcgtccaccctaacccgccccca
gatatggcggttgccgagtatcatgtcgttcgctgctcggctggtgttcttctaaagaat
aacatcttgagttcgggaagagcgctagcaccggcattcattgactatataaaatcagag
cttctgcttggactgagggaccctcatcaccagatacggaattacacgggcaatgtcatt
actgagttgttgcgcattgggggggtcatgtcctggacagacatgttggcccagttgatt
tcgcttgtggagaatacggatggaaataccactccggaaacccaagagggggccatggga
gcattgctgaaggtttgccaggatagcaaggacgaacttgacgaggaatacgatggctat
aggcccctcaatatactcatccctaagtttctattatttacgcaacaccctgtcccaaaa
gtgcgcatgcaggccttagagattgtcaacatatatctgcccatgaaaactcagtcgatc
cttgtccacatcgacacactcatagagagtttgtttcgccttggaaacgacgctgatact
ggagtacggagagaagtctgccgggctctggtacatctggttgacattcgggcggacaag
atagcgccccatatgcaaggaatcgtggactatatgcttgctcaacagaaaaatacggaa
gagcaggacttggccctagatgctgctgaattctggctgactgttggggaacacgagcat
ttgaggatcggactagggccgtatctgtccgaaattgtccctgtcttgctggcatctatg
gtttattctgaggaggatagagctagattagggggtggaggggatgatgcagatgttgag
gatcgagcagaagatataaggccaaactttgccaagagtaagcaaaggttaccgaatggt
gagaaaatcgacgaagagtacgattctgaagatgatgcttacgccgggatggatgaccct
gaagatcgttggaatttaaggaagtgctcggcggcagccctggatgtcttggcaactgtg
ttccatcagtcagtcttccagaccatcctgccctatctgaaggagaatattcgacatccg
gaatggccataccgggaggcggccgtcctagcactcggcgcagtagctgatggttgtctc
gaaggcgtcgtcccgcatctccccgatcttatcccctatctcatctctttactcgatgac
cctgagccgctcgtgcgccaaatcacgtgctggaccctcggtcgctattcccgctgggcc
tctcaccttgaaaacccggctgataaacaaaaatattttgagcccatgatggggggaata
ttgaataaaatgttggatggcaacaagagagtgcaggaggcgggcgcaagtgcctttgcc
aacctagaagagcaaagcaaagatctgttgaagccctacattgaaccgattgttcggcaa
tttgtggtagcaatgggaagatataaggatcggaacatgttcattctctacgactgtatc
cagacccttgcagagcacgtcggaagtatcttagcggagaaaccattggtagatatccta
atgcccgctcttattaacagatggaagttggtcaaggacgactcaagagagttgtttcct
ctccttgagtgcttatcttatgttgctacagcccttggaagggaattcgcaccattcgcc
ggccctatattcctcagatgcatcaatataatccatcaaaacctagagctgcagatggcc
tacaataacgatcgtgcgctggatcagcctgacaaggatttcttggtcacaagcttggat
cttcttagcgcagtaatccaagctttggattcaacaagtgcagagctagtctctgggaca
acacctccattctttcaactccttactgtttgcatggcggatccgagcaacgatgtgaag
caatcatcctatgccttacttggagattgtgccatctatgtcttcgaacaattgcaccca
ttcttgcccaacatcatggatcttctgattcaacaactgggaattcagtccctatccgac
gctgaaagcgatacagggtatagcgtggttaataatgcttgttggagttgcggcgaaatt
gctttgaaacaaggatccggaatggcaccttacgtcgaaaaactatataataggctggta
aaaattatacaaagacctgaaatcccctcatctgtaaccgagaacgccgctgtggcactt
ggccgcatcggaataggctcttgtgatgagcttgccccccaccttgagtcgtttgcatat
ccattcctagatgctctccagaaggtggcggaaacggacgagaaagacaccgccttgaag
gggttctgtatggttgttggtcgaaaccccgaggctatggaaagctgcctggtgcccttc
ttccgagccatcgctcgttataagcatgccagccctgaattgtctgcattgttccgacag
acacttattggatacaaatcgttcattacagattttgacttgtttatgagtgctatcccg
gcaccggatcgcgaagctctaaagtctagatacgccatctga
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