KEGG   Tuber melanosporum: GSTUM_00003008001
Entry
GSTUM_00003008001 CDS       T01282                                 
Name
(RefSeq) hypothetical protein
  KO
K10877  DNA repair and recombination protein RAD54B [EC:5.6.2.-]
Organism
tml  Tuber melanosporum
Pathway
tml03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:tml00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    GSTUM_00003008001
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:tml03400]
    GSTUM_00003008001
DNA repair and recombination proteins [BR:tml03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    Rad54 family proteins
     GSTUM_00003008001
SSDB
Motif
Pfam: SNF2-rel_dom Helicase_C ResIII HDA2-3 SWI2_SNF2
Other DBs
NCBI-GeneID: 9186234
NCBI-ProteinID: XP_002836675
INRA: GSTUM_00003008001
UniProt: D5G8M3
LinkDB
AA seq 870 aa
MFGGKKFVPPLLKKPAPAAAGTDDQPAAKRAKIEPLGGGRSLKLGGPIKRKPLLLLRNPE
LGAAVAAGEEKGEEGAAGEAYFRVLWRKPTTKKHKTFDGDGVLAISGGYAVLQDTSGKDL
GRTMFKRTLEVGSTTFIAGKEIEVDSVLSREEYLAGRPFLKSAAPPPLPSPPSTTTSTAP
QKETFTVVAPGNFFGSKFKTPLLSSTVMGRTHSKVPTPRHDPKAEGALVMPRPNEKSVPA
GKVVVDVVVDPFISHSLRPHQREGVMFLYEAVMGLKPFDGRGAILADEMGLGKTLQTMLV
PLWMLIDVEQNPIYGGGPVVKRALIVCPVTLINNWNKEFRKWLGKERIGVLVADSKTNIR
DFTHGKSYSVMVIGYEKLQKVQQELSAADVDIVIADEGHRLKTEKNKSAQAIRGLKTKRR
VVLSGTPLQNDLHEYFIMVDFVNPGLLESYSTFKKEFENPIVRSRQPGASKKDVEKGKAR
NEELASLTKLFVLRHPQGNLRSTRAFWGLPPLKLCNSPGLLADKPGKETNENVKGLLAGV
NPKLLESKSDSHSGKFRVLERLLLALRNTTDEKIVLVSNYTSTLDLLQNLLRSRGLSYLR
LDGTTPTNKRQELVDQFNRTNSTTAFAFLLSAKSGGAGLNLIGASRLALFDLDWNPATDA
QAMARIHRDGQRREVKIYRMLTTGCFDEKIYQRQLTKIGLADSVMDQKATASSFTLEELR
DLFSLDTETNCLTHDLLCCECEGKGYVAGAAETKSPFFQHSEDEKEDSDEDDEPKYPGLM
KASEVDFEKVEEDRKKAMQKGRGVGVDKNQLSSLMEYSHILTTRLLGNRGRGGEEDDKEE
YDEVSIEDEVLAKVIRNGAAKEVSFVFQKT
NT seq 2613 nt   +upstreamnt  +downstreamnt
atgtttggcggaaagaagttcgtgcctccacttttaaagaagccggcaccagcggcagca
ggcacggatgatcaacctgcggcgaagcgtgcgaagatcgagccccttggtggtgggaga
tcattgaaacttgggggaccgattaagaggaagccgctactgctccttaggaacccggag
ctgggggctgcagtcgcggcgggggaggagaaaggggaggagggtgcagcgggggaggct
tattttcgtgtgctgtggaggaaaccgacgacgaagaagcataagacgtttgatggcgac
ggggttttggcgattagtggggggtatgctgtgcttcaggatactagcgggaaggatctc
gggagaacaatgttcaagcgaaccctcgaagttgggtcgactacgttcatcgccgggaag
gagattgaagtcgattcggtgctttcgagggaagagtaccttgccggcagaccgtttttg
aagagcgctgctccacctccactcccatcgcctccgtccactacaacgtcgacagcaccg
cagaaggaaacgttcacagtcgtagcaccggggaatttcttcggtagcaagttcaagacc
ccactcctcagttccactgttatgggaaggacccattcgaaagtgccaacacctaggcac
gatccgaaagcggagggtgctcttgtaatgccccgccccaacgagaagagtgtaccggct
ggaaaagtcgtcgtggacgttgttgtcgacccgtttatttcgcacagcctgcggccgcat
cagagggagggtgtgatgtttttgtatgaggccgtgatgggacttaagcctttcgatgga
cggggagcgattctggcggacgagatggggctggggaagactttgcagactatgttggtt
ccattatggatgctaattgatgtagaacaaaatccgatatatggcggtgggccggttgtc
aaaagagctcttattgtatgtcctgtgacattgatcaataattggaataaagagttccgg
aagtggctgggtaaagagcggatcggcgtgcttgtggccgattcgaaaacgaacattagg
gactttacccatgggaaaagctattctgttatggtcattggttacgagaagctacaaaaa
gtccaacaggaattaagtgctgccgatgttgacattgtcattgccgacgaggggcacagg
cttaagactgagaagaacaagtctgcgcaggctatccggggattgaagactaagaggagg
gtcgtccttagcggtactccgctgcagaatgaccttcatgagtattttatcatggtggac
tttgtcaatcctggactgcttgagagttactcgactttcaaaaaggagtttgaaaacccg
attgttcgaagccgacaacctggtgcttcgaagaaggatgttgagaaagggaaggcgcgg
aatgaagagcttgccagtttgacaaagttgtttgtgctccgccatccccaaggcaactta
aggtctacaagagcattctggggtcttccgcctttaaagctttgcaattcgccggggcta
ttggctgataagccagggaaagaaactaacgagaatgtcaaaggtctcttagcaggagtc
aatcccaagctactcgaatccaagagcgactcgcatagcgggaagtttagggttcttgag
cgccttctcctggccttgaggaataccaccgacgagaagattgtgctggtatcgaattat
acttctacgctcgacttgctgcagaatctcctccgctctagaggccttagctacttgagg
cttgacggaaccactccgaccaacaaaagacaggagcttgtcgatcagtttaatcggacc
aatagtactactgcttttgcgttcctactatctgcgaagagtggtggtgcaggtcttaac
ttgattggagcttctagactcgccctatttgatttggattggaatccagctacggatgcc
caggccatggcgagaattcatagagatggtcaaaggagagaggttaagatttataggatg
cttaccactggatgttttgacgaaaagatatatcaaagacaactcacaaagattggcctg
gcagattcagtcatggaccagaaggctaccgcaagtagttttactctagaggagttaagg
gatttattctccctcgacacggagaccaactgtctcacacatgatctactatgttgtgaa
tgcgagggcaaaggttacgttgctggggctgcggaaaccaagtcgccgtttttccagcac
agcgaggacgagaaagaagatagtgacgaagatgacgagccgaagtatcctgggctaatg
aaagccagtgaggtagactttgagaaggtcgaagaagaccgcaagaaggctatgcaaaag
ggtagaggcgttggcgtggacaagaaccagctcagttctctgatggaatactcgcacatt
ctgaccactcgtcttctgggcaacagggggaggggtggggaggaagacgacaaggaggaa
tacgatgaagttagtatcgaggatgaagtattggcgaaggttattaggaatggagcggcg
aaggaggttagctttgtttttcaaaaaacctag

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