Tuber melanosporum: GSTUM_00003008001
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Entry
GSTUM_00003008001 CDS
T01282
Name
(RefSeq) hypothetical protein
KO
K10877
DNA repair and recombination protein RAD54B [EC:5.6.2.-]
Organism
tml
Tuber melanosporum
Pathway
tml03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tml00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
GSTUM_00003008001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tml03400
]
GSTUM_00003008001
DNA repair and recombination proteins [BR:
tml03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
GSTUM_00003008001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
HDA2-3
SWI2_SNF2
Motif
Other DBs
NCBI-GeneID:
9186234
NCBI-ProteinID:
XP_002836675
INRA:
GSTUM_00003008001
UniProt:
D5G8M3
LinkDB
All DBs
AA seq
870 aa
AA seq
DB search
MFGGKKFVPPLLKKPAPAAAGTDDQPAAKRAKIEPLGGGRSLKLGGPIKRKPLLLLRNPE
LGAAVAAGEEKGEEGAAGEAYFRVLWRKPTTKKHKTFDGDGVLAISGGYAVLQDTSGKDL
GRTMFKRTLEVGSTTFIAGKEIEVDSVLSREEYLAGRPFLKSAAPPPLPSPPSTTTSTAP
QKETFTVVAPGNFFGSKFKTPLLSSTVMGRTHSKVPTPRHDPKAEGALVMPRPNEKSVPA
GKVVVDVVVDPFISHSLRPHQREGVMFLYEAVMGLKPFDGRGAILADEMGLGKTLQTMLV
PLWMLIDVEQNPIYGGGPVVKRALIVCPVTLINNWNKEFRKWLGKERIGVLVADSKTNIR
DFTHGKSYSVMVIGYEKLQKVQQELSAADVDIVIADEGHRLKTEKNKSAQAIRGLKTKRR
VVLSGTPLQNDLHEYFIMVDFVNPGLLESYSTFKKEFENPIVRSRQPGASKKDVEKGKAR
NEELASLTKLFVLRHPQGNLRSTRAFWGLPPLKLCNSPGLLADKPGKETNENVKGLLAGV
NPKLLESKSDSHSGKFRVLERLLLALRNTTDEKIVLVSNYTSTLDLLQNLLRSRGLSYLR
LDGTTPTNKRQELVDQFNRTNSTTAFAFLLSAKSGGAGLNLIGASRLALFDLDWNPATDA
QAMARIHRDGQRREVKIYRMLTTGCFDEKIYQRQLTKIGLADSVMDQKATASSFTLEELR
DLFSLDTETNCLTHDLLCCECEGKGYVAGAAETKSPFFQHSEDEKEDSDEDDEPKYPGLM
KASEVDFEKVEEDRKKAMQKGRGVGVDKNQLSSLMEYSHILTTRLLGNRGRGGEEDDKEE
YDEVSIEDEVLAKVIRNGAAKEVSFVFQKT
NT seq
2613 nt
NT seq
+upstream
nt +downstream
nt
atgtttggcggaaagaagttcgtgcctccacttttaaagaagccggcaccagcggcagca
ggcacggatgatcaacctgcggcgaagcgtgcgaagatcgagccccttggtggtgggaga
tcattgaaacttgggggaccgattaagaggaagccgctactgctccttaggaacccggag
ctgggggctgcagtcgcggcgggggaggagaaaggggaggagggtgcagcgggggaggct
tattttcgtgtgctgtggaggaaaccgacgacgaagaagcataagacgtttgatggcgac
ggggttttggcgattagtggggggtatgctgtgcttcaggatactagcgggaaggatctc
gggagaacaatgttcaagcgaaccctcgaagttgggtcgactacgttcatcgccgggaag
gagattgaagtcgattcggtgctttcgagggaagagtaccttgccggcagaccgtttttg
aagagcgctgctccacctccactcccatcgcctccgtccactacaacgtcgacagcaccg
cagaaggaaacgttcacagtcgtagcaccggggaatttcttcggtagcaagttcaagacc
ccactcctcagttccactgttatgggaaggacccattcgaaagtgccaacacctaggcac
gatccgaaagcggagggtgctcttgtaatgccccgccccaacgagaagagtgtaccggct
ggaaaagtcgtcgtggacgttgttgtcgacccgtttatttcgcacagcctgcggccgcat
cagagggagggtgtgatgtttttgtatgaggccgtgatgggacttaagcctttcgatgga
cggggagcgattctggcggacgagatggggctggggaagactttgcagactatgttggtt
ccattatggatgctaattgatgtagaacaaaatccgatatatggcggtgggccggttgtc
aaaagagctcttattgtatgtcctgtgacattgatcaataattggaataaagagttccgg
aagtggctgggtaaagagcggatcggcgtgcttgtggccgattcgaaaacgaacattagg
gactttacccatgggaaaagctattctgttatggtcattggttacgagaagctacaaaaa
gtccaacaggaattaagtgctgccgatgttgacattgtcattgccgacgaggggcacagg
cttaagactgagaagaacaagtctgcgcaggctatccggggattgaagactaagaggagg
gtcgtccttagcggtactccgctgcagaatgaccttcatgagtattttatcatggtggac
tttgtcaatcctggactgcttgagagttactcgactttcaaaaaggagtttgaaaacccg
attgttcgaagccgacaacctggtgcttcgaagaaggatgttgagaaagggaaggcgcgg
aatgaagagcttgccagtttgacaaagttgtttgtgctccgccatccccaaggcaactta
aggtctacaagagcattctggggtcttccgcctttaaagctttgcaattcgccggggcta
ttggctgataagccagggaaagaaactaacgagaatgtcaaaggtctcttagcaggagtc
aatcccaagctactcgaatccaagagcgactcgcatagcgggaagtttagggttcttgag
cgccttctcctggccttgaggaataccaccgacgagaagattgtgctggtatcgaattat
acttctacgctcgacttgctgcagaatctcctccgctctagaggccttagctacttgagg
cttgacggaaccactccgaccaacaaaagacaggagcttgtcgatcagtttaatcggacc
aatagtactactgcttttgcgttcctactatctgcgaagagtggtggtgcaggtcttaac
ttgattggagcttctagactcgccctatttgatttggattggaatccagctacggatgcc
caggccatggcgagaattcatagagatggtcaaaggagagaggttaagatttataggatg
cttaccactggatgttttgacgaaaagatatatcaaagacaactcacaaagattggcctg
gcagattcagtcatggaccagaaggctaccgcaagtagttttactctagaggagttaagg
gatttattctccctcgacacggagaccaactgtctcacacatgatctactatgttgtgaa
tgcgagggcaaaggttacgttgctggggctgcggaaaccaagtcgccgtttttccagcac
agcgaggacgagaaagaagatagtgacgaagatgacgagccgaagtatcctgggctaatg
aaagccagtgaggtagactttgagaaggtcgaagaagaccgcaagaaggctatgcaaaag
ggtagaggcgttggcgtggacaagaaccagctcagttctctgatggaatactcgcacatt
ctgaccactcgtcttctgggcaacagggggaggggtggggaggaagacgacaaggaggaa
tacgatgaagttagtatcgaggatgaagtattggcgaaggttattaggaatggagcggcg
aaggaggttagctttgtttttcaaaaaacctag
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