Tuber melanosporum: GSTUM_00003251001
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Entry
GSTUM_00003251001 CDS
T01282
Name
(RefSeq) hypothetical protein
KO
K10981
DNA polymerase IV [EC:
2.7.7.7
]
Organism
tml
Tuber melanosporum
Pathway
tml03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
tml00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
GSTUM_00003251001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tml03400
]
GSTUM_00003251001
Enzymes [BR:
tml01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
GSTUM_00003251001
DNA repair and recombination proteins [BR:
tml03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
X-family DNA polymerases
GSTUM_00003251001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_B_thumb
DNA_pol_B_palm
DNA_pol_lambd_f
HHH_8
HHH_5
BRCT_2
Motif
Other DBs
NCBI-GeneID:
9182874
NCBI-ProteinID:
XP_002836932
INRA:
GSTUM_00003251001
UniProt:
D5G9D0
LinkDB
All DBs
AA seq
777 aa
AA seq
DB search
MIRDESLKTKKRFFEGLYSLDSIVEDDDLYEENPVSALLTTTKDPAIRSPRALPKLTRAR
TAATSSARPVSSSRAAVSRTLSLPAQKLHPSTVPNRPTPTLSTPTVVASSAQSKTSRPPG
LHDSSTFTVTPSSRASATATHSSPPLPDMPLVHTPTPTAPPESSRMSVVGSGGSTKRKRS
SKAAKQPTARDSQLVFSDLVFYFIPNDIRNPARKMRIQKAAEFGAFCINEWNDEFITHVI
VESHFKYLDVLKYLKLEKLPENIIVVNHEYTGDCLHHGRILDHAQKIYEVHGRAPLSPPQ
APAPPPCPSINETPSSPQSLQIKPSRRKKALESTQTSSHPPSSLSSSHPFEIDAPVPTRS
DYVTSSAPEGMAPKDDLDMMIYEAKKIGPLPLEDEEESKSVEGIETTDDEQDSLELAKRQ
KTGKKGRRGKNDKPGRYLGTFQCLQKNDGNQMEDNPNQRTIEILSEMQRYYEMLKDTWRS
LGYRKAIATLKKQDHRIRFANEARELPGIGDRIALKIEEIVRTDRLRRLDYTKMDPEDEA
LRLFLGIYGVGGVKAQKWVDAGYRTLDDIKAHARLTSSQQTGIEHYEDFQQRIPRDEVKQ
HGDIAMRVAHEIDAELKLEILGSYRRGAKDCGDIDIMITKEGAEAYAITGRISSPSIFFG
FQLYIAIPRGSDSGTKWHGASKISSGPWRRIDFLVVPWAERGAALLYFTGNDIFNRSLRL
LASKKGFRLNQSGLYKDVLRGKDRTKFTDGALMEGESEEKIFEILGVPYRPPEHRVC
NT seq
2334 nt
NT seq
+upstream
nt +downstream
nt
atgattcgggatgagtctctcaagacgaagaaacgtttttttgaaggcctctattccctt
gattcgattgtcgaggatgacgacctgtacgaagaaaatccagtttctgcgctactaaca
acgacaaaagatcctgctattaggagtcctcgagcccttcctaaactcacccgggctcgc
acagccgctacgtcgagtgcaaggcccgtttccagttcgagggctgccgtttcaaggacc
ctttctctgcccgcccaaaagcttcacccttccaccgtgcctaacaggcctacgcctaca
ctctcgactcctactgtcgtggcttcctcagctcagtccaagacgtctcgtcccccgggt
cttcacgattcttcaacatttactgtgactccctcttctagggcttccgctaccgccact
cactcatcaccgcctctacctgatatgccattggtgcatactccaacgccgacagcccct
cctgaatcctcgaggatgtctgttgtaggatctgggggttctacaaaacgaaaacgttcc
tcaaaggcggccaaacaaccgacggctagggactctcaactcgttttttcagaccttgtt
ttctactttattccaaacgatatcaggaatccggcgagaaagatgcgaattcagaaagct
gctgagtttggcgctttttgtatcaatgagtggaacgacgagtttatcactcatgttatt
gtcgaaagccatttcaaatatctcgatgtcctcaagtacctgaaacttgagaagttacca
gaaaacatcatcgttgtgaaccacgaatatacaggagactgcctgcatcatggtcgtatt
cttgatcatgcccagaagatttacgaggttcacggccgtgcgcccctgtcaccacctcag
gctccggccccaccgccttgcccttctataaacgaaacaccttcatcaccacaaagtctt
caaattaagccctcccggcggaagaaggctctagagagcactcaaacctcttcgcacccg
ccctctagcctctcgagctcacatcctttcgaaattgatgccccggtacccacacgcagc
gattacgtaacttcatctgcgcccgaagggatggcccctaaagacgacctagacatgatg
atttatgaagcaaagaaaataggccccttgccgctagaagacgaagaggagtcgaagagt
gtggaggggatagagacgacggatgacgagcaggattcgctggagctagccaaaaggcaa
aaaaccggaaaaaaaggcaggagaggaaagaacgataaaccgggacgctatctagggacg
tttcagtgcctgcagaaaaacgatgggaatcagatggaggataatcctaatcagaggact
attgagattttatcggagatgcagcgctattatgaaatgctgaaagatacttggaggtct
ctggggtaccggaaggctatagctactttgaagaaacaggatcataggattaggtttgct
aatgaagctcgagagctccctggaattggcgacagaatagccttaaaaattgaagaaata
gtccgaaccgatcgcctccgaaggcttgattacacaaagatggatcctgaagatgaggca
ttgaggctcttccttggaatttacggcgtaggtggagtaaaggctcagaaatgggtagat
gcagggtatagaactctggatgacataaaagcccatgcacgactcacctcatctcagcag
actgggattgagcactacgaagatttccaacaacgcatcccacgggacgaagtgaagcag
catggcgacattgccatgcgtgttgcgcacgaaattgatgccgaactaaagcttgagatt
ctaggatcgtacaggcgaggtgctaaggactgcggcgacattgacatcatgattaccaaa
gagggtgcggaggcctatgcaattaccggtaggatatcctcccctagtattttttttggc
ttccaattgtatatcgcaatcccaagaggctcagacagcggcacaaagtggcatggcgca
tcgaaaatctcctcggggccctggcgtcgaatagacttcctagtagtcccctgggcagag
cgtggcgcggctctactatacttcacaggcaacgacatcttcaacagatccctccgtctc
ttagcctccaaaaagggcttcagactcaaccagagtggactgtacaaagatgttttgcgc
ggaaaggacagaacaaagttcacagatggagccctgatggagggcgagtcggaagagaag
attttcgaaatcttgggcgtgccgtacaggccgccagagcacagggtttgctaa
DBGET
integrated database retrieval system
