Tuber melanosporum: GSTUM_00003607001
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Entry
GSTUM_00003607001 CDS
T01282
Name
(RefSeq) hypothetical protein
KO
K09291
nucleoprotein TPR
Organism
tml
Tuber melanosporum
Pathway
tml03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
tml00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
GSTUM_00003607001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tml03019
]
GSTUM_00003607001
Messenger RNA biogenesis [BR:
tml03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
GSTUM_00003607001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_MLP1_2
Thiamine_BP
Motif
Other DBs
NCBI-GeneID:
9187471
NCBI-ProteinID:
XP_002837340
INRA:
GSTUM_00003607001
UniProt:
D5GAI8
LinkDB
All DBs
AA seq
2240 aa
AA seq
DB search
MASVDVLTPSPEGGGAIDVTRLSTFLLVGEDVISSLAGITEDYITSVLRAIDDRAREYED
LRADKLRIEVELEQSVRTTDNKVKGMKKQLDASLVETQELKSKLENSETARKAVETELEN
YKSSRAIVDEEVHTLRTRVQSLESDKRDTLDALDRKANDYDRLQDEYAALQSKSIETRRE
ISSLETQLRQAQSTQTSSRFKEQNLVQEVELLKKNNAWLENELNTKVAEFQKFRKEKAAQ
NSALQRELDEALSSVDITQRNSDNLKQRFDEISKKADDALAKVQDLQNKAVLQEENFRNE
MHSQQRLAELFEQSTKSARARVADLERLLEQEHERESVEIGRARAAAETEQAEKDAAITR
VSQLEVQVERLEADLSAYATGLFNAGSRGSINGNSTPNRRPGSAAGTPGGLNLASPAAMR
LQKSGISVTQLYSDYMAMKASYEAEKRRNTKLEEAIEEVMQDLEQKAPEIQELREEDARL
QKDLIEMSELLDKAHKESERIEKDSRTVSLKFKDTEREVVVLRKQLRDLSIQVQVLLVEI
EHRDSGADPLSAAQNEVYEQIITGAERDVAEADTDRIISQKLTIFRGVRELQDKNEQLLK
AIRELSMKMEQKEQDRKSEQLGKEGTEIAQLRGVVAKLRDELTALGAKAQSFVRERDMFR
RMLQNKGDLLANSNINDQDMSAPEAGATSNQGPENLAELLRELQAQYDQFKTEALENHTT
LNDQTRRLAQEKTELEVKARTVASQLELANDRYEMLNGNFNVLRMENTELQKRIASLQEA
QAKEDAMNRKLTEDLADSQSVLEGMRNETANLKAEKNLWRNIEQRLAQDNEALSQERTRL
NELIADLQSMQAQREREESETKRRLNSQNEKLETEIQQIKRRLNEEIEAAKKFAVRKEID
ARDAQKKIDDLNSTLASTRESLVASQTNETHLQSRVEELTSQLKSMEEKLAIQSSQPQVA
SRLEGEDDDEDSEYRLRVLQDECDKLQGQLNDATNEINNLKTQVEQYKLIALGGEEELAS
INDTYDAYKESMEQQASEQEDKIHDLKQRLEDTNNELASVNQELSDLRQAELEKRQQFED
ERNLLQSQISGLKEDAEKNIAAVSCYQEDLRSQARIAQDAQQNYERELVKHAGAAQALQQ
VREEHSNLKAEVYQIKSEAETAKANLAASESSWESQKEMYVKELEETKKHSEGLSKQYKI
LLDQFENVNTQISEIKKSRAASDDYNEFREQPTTDRGLEDLREVLRYLRNEKEIVDVQYD
LCLQENRRLKQQLDYTKTALDENKLLLAQERERESAQLRGAMQHKDLMERISELNILRES
NSALRSDCEKRAKKVNELTGKVDELVAKIRPLEDQVSSLEAEREAKEEQVKLLQENSEHW
KARAQQILQKYDVSFVDSGTSDLFNVVQRVDPAELEALKEQARTLEEKCSTLEAERDTLQ
KQLAEFEELKQKELTEAAEVWRSKLATIVQTTKVKLREANEKLTAEKKNAADAQEQLGTL
QTELNAARQSSSEEVKHLQEEKNKLESEFQAMQTKAAEAEENFKVYKGRASTLMRDINTL
QKQYEEAQQEIDALKALGQPAPVAPMAPVIDEATIEAEVTRRIATLPPVNNPASIKAEVT
RRLAEIQANQPPQLSTELIDHTAAIEAEVARRIADFQANQTLQSTDPPQPVDNSAAIEAE
VTKRMAQAQHIADSAAVEAEVSRRLAEGQVSHGSEPGEVGPSAADVEKIVEDRVKKEKEK
LEQRITEARKGFQEYKAKAVAKALSDAGVDFDKKMAAKDEEHKKQVQALEAAIAQLKSEI
EELKKQLEEVKVAQPTVSQVGVEQHQKALDAKDLEHQKEIQKIKEEEESKLEQAKVDIRH
EVQAEFLVIKGGETDTTDPSAKKPPTQEELKAVIKRNVEHRLGKEKEKWQREIDNEQEKA
IESKLQGVLAEKLKAMEAELQAQQAILLEKSKDALRQEGAARIKVQLSMMEKRNKTLEEK
IKAYESLGGSPPQQAAPPAAGIKLPAAAINPAPQQGETSQIPVPRGQGPPRRADGQGTGP
AALRSLRGALESSIPRGGGRGGGQGGRGVGGQPQQQQQQLQPGMQQSPGTSQPYPQPAFQ
TPQMGQIGQMGQMSPNQQQQQQQQGLPQPVFGHRPSLPGQGQQPQPQPQLPRPGTFSSAR
GSGGPFNPGQGRGRGAAPQLQNIQTGHPQQNTTPSQQSPGRGMNPVARQFVPTKRLREDG
TEAEDQNSNIGKRIRGGHTG
NT seq
6723 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcggtcgacgtactgaccccttcccccgagggaggcggtgccatcgacgttaca
cgcctttccacttttctcctagtaggagaggacgtcatttcttctcttgctggaatcacc
gaggactacataacttcggttctccgggctatcgatgatagggctagggagtatgaggat
ttgcgggcggacaaactccggatcgaagttgaactagagcaatccgttcgtaccaccgat
aataaagtcaaggggatgaaaaagcagttggacgcaagtcttgtcgagacacaagagctt
aaatcgaagctcgagaactcggaaaccgctcgaaaagccgtcgaaactgagcttgagaat
tacaaatcatcgagggccattgtcgacgaggaggtccatacattgaggactcgggttcag
tcgttggagtccgataagcgggacactttagatgcccttgaccgcaaggctaatgattac
gatcgcctgcaagatgagtatgcagcgttacagtccaaatcgattgagacacgccgggag
attagctctctcgaaactcaactccggcaggcgcaatcaacgcaaacgtcttccaggttt
aaggagcaaaacctagtccaagaggttgaattgcttaagaaaaacaacgcatggctggag
aacgaattgaatactaaggttgcggaattccagaaattcaggaaggaaaaggctgctcaa
aactccgctttgcaacgtgaacttgatgaagcattgagttcggtggatattacacagcgc
aactcggataatttgaagcaacgttttgacgaaatatctaagaaggctgacgatgccctg
gctaaagtacaagacctccagaataaggcagtgctccaggaggaaaacttcagaaatgaa
atgcattcacaacagcgattggcagaactattcgagcagtctactaagagcgcaagggca
agagtagccgacttggagcgattgttagaacaagaacacgagcgtgaaagcgtggaaatt
ggccgggcccgtgcagcagccgaaacagagcaggcagagaaggatgctgctataactcgt
gtttcacagctagaggtgcaagtggagagattggaggctgacctttctgcgtatgccact
ggcctatttaatgctggctctcggggaagtattaacggaaattccacaccaaatcgccgc
ccaggatcagcagctggaacgcccggtgggttgaatctggcctctcccgctgcaatgagg
ctccaaaagtctggcatttctgtaacccagttatactctgactatatggctatgaaagct
agttatgaagctgagaagcgaaggaataccaagttagaggaagctatcgaggaggtgatg
caggacttggaacagaaagcccctgaaattcaggaacttcgtgaagaggatgcaagattg
cagaaggacctgattgaaatgagcgaattacttgataaggcccacaaagaaagcgaacgg
atcgaaaaggactcgagaaccgtttccctgaaatttaaggatactgaacgggaggttgtt
gtccttagaaagcagctccgcgacctaagcatccaagttcaagttctcctggtcgagata
gagcaccgcgactctggagctgatcccctctctgcggcccaaaacgaggtctacgaacaa
ataatcaccggagccgagcgtgatgtggccgaagcagatacagacaggataatttcgcaa
aaattgaccatattccgcggtgtcagagagctccaggacaaaaacgagcagttgcttaaa
gctattcgggagctgagcatgaagatggaacagaaggaacaagataggaagagtgaacag
ctagggaaggaaggcacagagattgcgcagctaagaggtgttgtggcaaagcttagagat
gagctcacggctttgggcgcgaaggcgcagtcgtttgttcgtgaacgcgatatgttccgt
cgcatgcttcagaacaagggtgatctcctcgcaaatagcaacattaatgatcaagatatg
tccgcccccgaagccggagcaacttccaaccaaggtccagaaaatcttgcggagctcctt
cgggaacttcaggcacaatacgaccaatttaagacagaggcgttggaaaaccacacgact
ctaaatgaccaaaccaggcgactagcccaggaaaagacagaattagaggtgaaggctcga
acagtggcttctcaacttgagttggctaatgaccgatatgaaatgctcaatggaaacttc
aatgttctcagaatggagaatacagagcttcagaaacgcattgcttccttacaagaggcc
caggctaaagaggatgcgatgaaccgaaagcttacggaagaccttgcggattctcagtct
gtacttgaggggatgcgtaacgaaactgccaatcttaaggcggagaagaatctttggagg
aatatcgaacaacgccttgcccaggataatgaagcccttagtcaagagcgaacccgactg
aacgaacttatcgctgatcttcaatctatgcaagctcaacgggaacgagaagagtcagag
acgaaaaggcgcctcaacagccagaacgagaaactcgaaactgaaattcaacaaataaaa
cgcaggctaaatgaggaaatcgaggcagcaaaaaaattcgccgttcggaaggagatcgat
gctcgagatgcccagaaaaagattgatgatctgaacagcacactcgcttctacaagggaa
tctcttgtcgcttcccagacaaatgagacccaccttcaatccagggtggaagagttaacg
agtcagttgaagtccatggaggagaaattagccatccagtcatctcagcctcaagtcgcc
tctaggctagaaggagaagatgatgatgaagactcggaatatcgactacgggtgctgcaa
gatgagtgcgataaactacaaggtcaattgaacgatgccaccaacgaaatcaacaacctc
aagacacaggttgaacaatacaaattgattgctctgggcggcgaggaggaactcgcgagc
attaatgatacttacgatgcatacaaagagagtatggagcaacaagcaagtgagcaagag
gacaagattcatgaccttaagcagagacttgaggataccaataatgaattggcatctgtt
aatcaagagttatctgacctccggcaagcggagctcgagaagcgacagcagttcgaagat
gagcggaaccttctacaatctcagatcagtggtttgaaagaagatgccgagaaaaatatc
gcggccgtctcttgctatcaagaagacttaagaagccaagcccgcatcgcccaagacgcc
cagcagaattatgagcgcgagctcgtcaagcacgccggggctgctcaggcactgcaacaa
gttcgcgaggagcactccaatcttaaagccgaggtctatcagattaagtctgaggcagaa
acagcgaaggccaaccttgcagcatccgagtctagctgggaatctcagaaggaaatgtac
gtcaaagagctcgaggagaccaaaaagcactccgagggcctttccaagcaatacaagatt
ttgctcgaccaatttgagaacgtcaacacccaaatatcggaaatcaagaaatctcgtgcc
gcttcagatgattacaatgagttcagagaacaacctacaacagacaggggtcttgaggat
ctccgagaggtcctcagatatcttcgtaacgaaaaggagattgtggatgtccaatacgac
ttgtgtttacaggaaaacaggcggctcaaacaacaacttgattatactaagactgccttg
gatgagaataagttgctgcttgcgcaggagagagagcgtgaatctgctcaacttcgtggg
gccatgcaacataaggatttaatggaaagaatctcagaattgaacatcctacgggagagc
aacagcgctctgcgaagtgactgtgagaagagggccaaaaaggttaatgaactaactgga
aaggttgacgaacttgtggcgaagattcggcctctagaagatcaagtgagttctctcgaa
gcggagagagaagccaaagaagagcaagtcaagttattacaggagaatagtgagcactgg
aaagccagagctcagcaaattctacagaaatatgacgtaagtttcgttgactctgggact
tcggacttgtttaacgtggtacagcgtgtcgatcccgccgagcttgaagccctcaaggaa
caggcgaggacccttgaggagaaatgcagcactctcgaggctgagcgcgatactttacaa
aaacagctcgctgaatttgaagagctgaagcaaaaagagcttacagaggcggcggaggtc
tggcggtcaaaacttgcgaccatcgtccaaacaacaaaggtaaagcttcgtgaggccaat
gaaaaattgacagcagagaaaaagaacgccgcggacgcccaagagcaattagggaccctt
cagacggagctcaatgcggcccgacagtccagcagtgaggaagttaagcatttgcaggag
gaaaagaacaagctggagtctgaattccaagccatgcagaccaaagctgccgaggctgaa
gagaacttcaaagtctataagggtagagcatcaacattgatgcgcgatataaacacgtta
cagaaacaatacgaagaggcccaacaggaaatcgatgcgctaaaggccctaggacaacct
gctcctgttgccccaatggcccctgttatcgacgaggcaaccattgaagcagaggttact
cgaagaattgctacgcttccaccggtcaacaaccctgcatcaattaaggcagaggtaacc
cgaaggcttgccgagatacaagccaatcaacctccccaactgagtacggagttgattgat
cacacagccgccatcgaagctgaggttgcccgacgaatcgccgatttccaagcaaaccag
accttacagagcactgatcccccacaacctgtggataactctgctgctatcgaagctgaa
gtaaccaagagaatggctcaggcccagcatattgcagactctgctgctgttgaagcagag
gtttctcgcaggcttgctgagggccaggtgtcacatggttctgagccaggtgaagtaggg
ccttccgctgctgatgttgaaaagattgttgaggatcgtgtaaagaaggaaaaggaaaag
ctagagcaacgaattactgaggctcgcaagggcttccaggagtacaaggcaaaggctgtt
gccaaagctcttagtgatgcaggagttgatttcgacaagaaaatggcggcaaaggacgag
gaacacaagaaacaggttcaggccttggaagcagcaattgcgcaactaaagagtgagatt
gaagagctcaaaaagcaactcgaagaggtcaaagtagctcagcctacagtttctcaagtc
ggtgttgaacagcatcagaaagcccttgacgccaaagatctagaacaccagaaagagatc
caaaagattaaggaggaggaggaatcaaagcttgagcaggccaaagtagatatccggcat
gaggtgcaggcagaatttcttgtcattaagggtggtgaaactgatactactgacccgtcg
gccaagaagcctccaactcaagaggaattgaaggccgtcatcaagaggaatgttgagcac
cgtcttgggaaggagaaggagaaatggcagcgggaaattgataacgagcaggaaaaagct
attgaatccaaattgcagggtgtcctcgcggaaaagcttaaggcaatggaggctgaactc
caggctcaacaggcaatattattggaaaaaagcaaagatgcactaaggcaagagggggcg
gccagaattaaggttcagttaagcatgatggaaaagcggaataagactctggaagagaag
atcaaggcctatgaatcccttggaggaagtccaccccagcaggcggctcccccagccgct
ggtatcaagctcccagcagcagcaatcaacccagccccacagcaaggcgaaactagtcaa
atccctgttccacgggggcagggccccccacgcagagcagacggacaaggaactggtcca
gcagcactgcgaagtctccgcggcgcccttgagtccagcataccgcgtggaggtggacgc
ggtggtggtcaaggcggaagaggagtgggcggccaacctcaacaacagcagcagcaactg
caacctggtatgcagcaatcgcccggcacttctcaaccatatccccagccagcattccaa
acgcctcaaatgggccaaataggtcagatgggtcagatgtctccgaatcagcagcaacag
cagcagcagcaagggctaccacaacccgtcttcggccatcgcccaagtctaccgggccag
ggacaacaaccccaacctcaacctcaattacctaggcccggaaccttcagcagcgcaagg
ggatctggaggtcccttcaaccctggccaaggtcgcggtcgtggagccgcaccgcaacta
caaaacatccagaccggacaccctcaacaaaacactaccccatcccagcagagcccaggt
cgtggcatgaatcccgtcgcgcgccaattcgtaccgacaaaacgcctgcgggaagacggt
acagaagcagaggatcagaactcaaacataggaaaacgcataagaggtggccataccggt
tag
DBGET
integrated database retrieval system
