Tuber melanosporum: GSTUM_00003621001
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Entry
GSTUM_00003621001 CDS
T01282
Name
(RefSeq) hypothetical protein
KO
K15271
ATP-dependent DNA helicase HFM1/MER3 [EC:
5.6.2.4
]
Organism
tml
Tuber melanosporum
Brite
KEGG Orthology (KO) [BR:
tml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tml03036
]
GSTUM_00003621001
Enzymes [BR:
tml01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
GSTUM_00003621001
Chromosome and associated proteins [BR:
tml03036
]
Eukaryotic type
Meiosis-specific proteins
Others
GSTUM_00003621001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Sec63
SNRNP200_wHTH
ResIII
Helicase_C
AAA_22
HHH_5
DNA_pol_lambd_f
Motif
Other DBs
NCBI-GeneID:
9187485
NCBI-ProteinID:
XP_002837354
INRA:
GSTUM_00003621001
UniProt:
D5GAK2
LinkDB
All DBs
AA seq
1535 aa
AA seq
DB search
MEDLFDELMGVLGDEAPRDSTGREYDAGPSRQESGFSFDVSHQPREYSRYWPMQSWEDLS
RYTASQQLVDTGRNRVQMRPRDAIEQASALGLGLGGVPSRGYNTEYPLQGGVVGSYRDGG
RRNPTWENVGLSGTLQSPHFGHSVGISSTAEATWEIPSSQPRRRATSRGPRRLLGIRGVG
DTTESRFRPPLRAAPAAKVSSAPSGTISHSHAPPMVQGVSLLSVNILPDKHRGLFQFPLF
NAVQSKCFPLVYESDDNVVLSSPTGSGKTAILELAICRLSVKMQPGSYKIVYQAPTKALC
SERKQDWDKRFSVIGLKCTELTGDTQQSQLRNVKDGDIIVTTPEKWDSMTRRWEDHRKLL
EMVRLFLIDEVHILKEDRGATLEVVVSRMKSIGSDVRFIALSATVPNSADIAEWLGKCSS
VSQSPAHDQRFGEEFRPVKLQKFVYGYQSPGNDFVFDKKLDRALPEVIRKHSAGKPIMVF
CMTRAMCISTAKVLAQCCSTVKPADRMWPAPTIQFSFKDKDLHATGVCGVAFHHAGLDQN
DRALVEKLFLEGHLSVICCTSTLAVGVNLPTHLVVIKNTVTWSNGGPKEYVDLEVMQMLG
RAGRPQFDDTGAAVLMTRREHRVRYEKMVSGTETVESCLHENLVEHINAEIGLGTITNAE
SAKRWLRSTFLYVRLKKDPSHYGITGKGGIQDIEERLEEICERNIKLLTEEGLVLTGGGR
LRCSELGLAMARYYVKFGSMKTILHLQERAGLSDVLVALSSAEEFKEIRFRSGEKGLYKE
LNKSPGMRFPVKGDLWNSSHKVQLVIQFEIGMMEFPPEAGFQKYKTSLLQDKALVFQHCH
RIIRCIIDCRICSKDATTVKAALELGRSLKAKAWEDSPSQLRQIEGFGPVAIKKLVNAGI
RNLEVLARLESHKVETALSRNPPFGANVLKIAQSVPLFRVFCSQISASGNGRDPVKLVVK
AELGFLNSHPPERFRGNLLFANILAERSDGLLVDFRRIPVPKLDGGKTIQFKVDLETPEQ
GVLCHIVCEDIVGTIKTHVLKPVVNIRLFPRNAVISPPKNPHGHAIDSSAVIEHPGGEEE
YGDAEFIAAVEDLDFSHIAGLGESLTNQTRLNTAANARMPASNANEVKESAASEEAGQEA
HQLPNGNWECKHKCGDKTRCKHFCCREGLEKRPKAIKVTKDTVAIKAGTIPGAKPAERGS
RGPENNGLQGLPYHRQANSVSKGVRSDEDFASSLPPPKPNLPLSTEITRLKRLHEAHGGE
TRSKVRRISAMPFPQGKHTGQSVSRKIHGERLSDDDDGLPTLERLLREGTGYKWCPEATA
SEPRKAILRHPIGKKPDAKKDGVNGVQRIESRAEPVGMEQIPAVHASHGKGRLVLNTKPG
DEIIDSKERILYPPISSLNKSLDEPVGEGDNIQKVEHRTKREDTVLYEDMKACDVKQEHE
VAVVPPTGLQVGGIKQEDYEPIDLSVPVPAEGLKYESETEYSRGQRPKTEHNEDLDYIVM
YGSQGSIKKDCEVKWEETEETLQEKDLFEDFVIYV
NT seq
4608 nt
NT seq
+upstream
nt +downstream
nt
atggaagacttgttcgatgagctgatgggtgttctcggggacgaagcccctagggatagc
actggcagagaatatgatgctggcccctctcggcaagaatctggatttagttttgacgtc
tcccatcagccacgagaatacagtcggtattggccgatgcaaagttgggaggatttgagc
agatatacggctagtcagcaattagtggacactggacggaacagggtgcagatgagacct
cgggatgccatagaacaggcctctgcgttgggtttgggcctagggggggtaccgtctcgg
ggatataatactgaatatcccctacaaggcggggtagtgggctcttatagggacggtggc
cgaaggaatcccacctgggagaatgtaggattgagtggaactttacaaagcccacatttc
ggtcacagtgtcggcatttcctcgaccgctgaggcaacatgggagattccaagcagccaa
ccccgtcgaagagcaacatcccgtgggcccagaaggctgcttggaatccgtggagtagga
gacaccacagaatcacgttttaggcctcctctcagagctgcccctgctgccaaggtgtct
tcagcaccctcaggaacaatctcgcattcccatgctcctccgatggtgcaaggagtctct
ctactctctgtcaatattttgccagataaacatcgaggcttatttcagttccccctattt
aatgcggttcagtcgaaatgctttccactggtttatgaatcggatgacaatgttgtcctg
tcgtctcctaccggatctgggaagacagcgatcctggagcttgcaatttgccgactttca
gtcaaaatgcaaccagggagttataaaattgtttaccaggcgcctacaaaagccctttgc
agcgaaagaaaacaagattgggataagaggtttagcgtgattggtcttaaatgcacagag
ctaacaggtgatacccaacaatcacaattacgaaatgtaaaggatggggacattattgtg
actactcccgagaaatgggatagtatgacgagacgatgggaagaccacaggaaactgctg
gagatggtccgcctgtttttgattgatgaggttcatatcctaaaggaggaccgtggcgca
accttagaagttgtggtgtcaaggatgaagtccattgggtccgatgtccgattcatagct
ctaagcgccacagtgccaaattccgccgatatcgcagagtggctgggaaagtgctcttct
gtgtcgcaatccccagcccacgatcaaagatttggtgaagaatttcggccggtgaagctg
cagaagtttgtgtacggatatcaatctcccggcaatgacttcgtatttgataagaaactg
gatagagcactaccagaggtcattcggaaacactctgcggggaagcctatcatggtgttt
tgtatgaccagggctatgtgtatcagcacagccaaggttctcgctcaatgttgttccact
gtaaaaccagcagatagaatgtggccagctccaacgattcaattctccttcaaggataag
gacctacatgcaactggtgtatgtggtgtggcttttcaccatgccggacttgatcagaac
gatagggccctggtcgagaagctttttcttgagggccacctatctgtgatctgctgtaca
tcgacgttggcggttggcgttaatctgcctactcatcttgtggtcataaaaaatacggta
acatggtccaatggtggccctaaagaatatgtggatcttgaggtgatgcagatgctagga
agggctggccggccacaatttgatgataccggagcagcagttttaatgacaaggcgggag
catcgagttagatatgaaaagatggtttccgggaccgaaaccgttgagagctgtttacat
gagaacttagtggagcatataaatgcggagataggcttgggaactattaccaatgccgaa
tcagcaaaaaggtggttgagatctacctttctttacgttcgtttgaagaaggatccatcg
cactacgggataacagggaagggggggattcaggatatagaagagagactggaggagata
tgcgaaaggaacattaaacttttgaccgaggaaggactggtgctaacagggggcggtcga
ctaaggtgctccgaactaggactagcaatggctagatattatgtaaaatttgggtcgatg
aaaacgattctgcatcttcaagaacgagcaggtctatcggatgtgcttgtcgctttgtct
agtgcagaagaatttaaagaaataagatttcgaagcggtgagaaggggctttataaagag
ctgaacaagtcaccggggatgagattcccagtaaaaggtgatttgtggaatagttctcac
aaggtccaactggtgattcagttcgagattggaatgatggaatttccgccagaagctggc
tttcaaaagtataagacctcgctgttacaagataaggcattggtttttcagcattgtcat
cggatcattcggtgcatcattgattgcagaatatgctcgaaagatgcaacaacggtgaaa
gctgcgctagagctaggaagatcacttaaagcaaaggcatgggaggattctccaagccag
ttgcgtcaaattgaaggatttgggcctgtggcaatcaagaagttggtaaacgcaggaatc
agaaatctcgaggtgctcgcgaggcttgagtctcataaggttgaaactgctctctcccgg
aaccccccgttcggggccaacgtgcttaagatagcccaatcggtccctttgtttagggtg
ttttgtagccaaatatctgcgagcggcaatgggagggatcctgtaaaattagttgtgaag
gcggagctgggattcttgaacagtcacccgcctgagagatttcgcggaaacctccttttt
gcaaatattttagctgagcgttcagacggcctcttggtcgactttagaaggattcctgtc
ccaaagctggatggtggaaagactattcagtttaaggttgatttggaaacaccagagcaa
ggggttttgtgtcacatagtttgcgaagatatagttggcacaattaagacccatgtgctt
aagccggtagtaaatattcgtttatttccacgaaatgcggttatatcacctccaaaaaat
ccccatggtcatgcgatagattccagcgcggttatagagcatcctgggggtgaggaggaa
tatggggatgccgaattcattgccgctgtggaagaccttgacttctctcatattgcgggt
cttggcgaatcgttgaccaatcaaactagactaaatacggcagccaatgccagaatgcct
gctagcaatgctaatgaagtgaaagagagtgctgcctccgaggaagcaggccaggaggcc
caccaactgccgaatggaaattgggagtgtaaacataaatgcggggataagaccagatgt
aagcatttttgctgccgcgaaggattagaaaaacgccccaaggctataaaagttacgaaa
gatactgttgcgataaaggcaggcacaattcctggagcaaagccagcagagagagggtcc
agaggacccgaaaataatgggttgcagggattgccataccatcggcaagccaactctgtg
tcgaaaggagtgagaagtgacgaagacttcgcaagctccttgcccccgccaaaacctaac
ctcccactctctacagagatcacacgtctaaaaagattgcatgaagctcacgggggagag
actaggtcgaaggtgaggcgtatttctgccatgccattcccacaaggaaagcatacaggc
caaagcgtatccagaaaaatccacggggagagattgagcgatgatgacgatgggcttcca
acgctggagaggcttctgcgtgaggggacaggttataaatggtgtcccgaggcaacggct
tcggaaccgaggaaggctattctcagacacccgattggaaaaaaacccgacgccaaaaag
gatggtgtgaacggcgttcagaggattgaatcaagggctgaaccagtggggatggaacaa
attccggcagtccatgcatcacatggtaaaggtagactggtgctaaatacaaagcccggg
gatgagattatcgattctaaagaacggatactctaccctcccatatctagcctgaataag
tcactggatgagccggttggagaaggagacaacattcagaaggtcgaacatcgcactaag
cgtgaagatacagtgctctatgaagacatgaaggcatgcgatgtgaaacaagagcatgag
gtggcagttgtaccaccaaccgggctacaggttggtgggattaagcaagaggactacgag
ccgatagacctgagtgtaccggtgcctgccgaaggactcaagtacgaatccgaaacagaa
tacagcaggggacagagaccaaaaactgagcacaacgaggacttggattatatagttatg
tacggtagccaaggcagtattaagaaagattgtgaggtcaagtgggaggaaaccgaagaa
actttacaggaaaaagacttatttgaagattttgtaatttacgtctaa
DBGET
integrated database retrieval system
