Tuber melanosporum: GSTUM_00003624001 Help Entry GSTUM_00003624001 CDS       T01282                                  Name (RefSeq) hypothetical protein   KO K19525   vacuolar protein sorting-associated protein 13A/C Organism tml  Tuber melanosporum Brite KEGG Orthology (KO) [BR:tml00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:tml04131]     GSTUM_00003624001 Membrane trafficking [BR:tml04131]  Endosome - Golgi transport   Rab GTPases and associated proteins    Rab associated proteins     GSTUM_00003624001 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  VPS13_VAB VPS13_N VPS13_M VPS13_C Motif Other DBs NCBI-GeneID:  9187487 NCBI-ProteinID:  XP_002837356 INRA:  GSTUM_00003624001 UniProt:  D5GAK4 LinkDB All DBs AA seq 3119 aa AA seqDB search MLAFGGWFSEWLIPSLADISVFLSGDVRLRNLELKKEALDQMKLPLNVMEGHLGQLTLQI PWSNLKGKPVKVIIEDVYLLANPKADQEYNEEEEQRRKQAVKQEKLQNAELLQDRNTEGM SVEELQKNQSFTNSLVTKILDNLQITVKNIHIRYEDSLSTPGHPFSLGFTLEEFSAVSTN ENWEPNFIQDNVSVTHKLAKLGSLAIYWNTDSKHFGGRPDAHATMVKGFKGLIASESNIP SGHQFVLKPVSGTGHLEVNKTGRADVPKMVARMIFDEIGFILDEDQYRDVLMMVDNFHFY LRHQQYKRYQPKGKSPKEDPMAWFLFAGNAVLSKIHEKNKKWSWDYFRERRDDRKQYIKL FKQLKQYEQLAASEAEELKKLEWKLSYEDLRFYRSLARNQLRKDRALVKKPEHQGAQGWV SWMWGSVQKKEEEPSTIMTDQQRKELYEAIDWDEKKAIAESIDLPRDSVKMQVEASLRTG SFTLKRDPHGDGAEILALLFDTFKSRVLQRPDSFYGELSLGGLRVYDGTTKGSLYPQIVR VKDAVSALGLDELDDDDEDVPKESNPDAPFFQASFERNPLDESADSAVTMKMRSMEIIYN PIFVEEIYNFFKPPERHMESIGALMESAGATVEGIRQQTRAGLEFALEEHKTLNAKLDLQ APLIIIPESICDEKSNCLILDAGHVSLTSDLVKKGDIREIHSKQRQQYSQEDYARLESLM YDKFSLNLESTQVLIGPSVEETKLQLRAKSDRKHLHIVDRININFTVDISILPKASNLTK FRMSGHLPVLHASLSDKKYKALMKIIDVAIPKLGREDSPNPRKSVRQPAQDWKSKPMPNQ THEHFEEASDGIQNDSPSTHQRTFELKFTVGELRGSLFRADPEGKNPDKQLVLLVAEHFA LDFHIRPFDMAAEVILKSLNIEDLIDDDPSTTFKRIVTSDTLQEQSNDNPLFFVKYVKVK RESPEFMTVYEAIETNVDVSISTINVVITRKTVLTLLDFAITTFTNPGNNQTKAAIQSTK GATYSSGEEASDLAIPNDPLEAEKIRVKINLDSISLILNNDGIRLATLSLASADVGMFLM GKTMRIGARLGNFSLFDDINEGAEENSPLRQLVTIQGDELADFRYETFDPEAIQSYPGYN SSIYLRSGSIKVNFVEEPFRKIIDFAVKFGKMQALFNAARQAAMNQASQMQENANQIHFD ILVRTPIIVFPRTNFAHHAERDLLTAYLGELYAQNKFVPLNNSEDSAVVNKISAGIRKTR LTSVFYFNQGQKEELELLDKLDISFGVTYLEHTCNAERPDLEIEGSMSDLNLKLTQTQFK FLLELSRSIPAVFTSDPKEEGLVEQLPVENIEPAKKAIQQTSEESAQVVNLNPELGVSSD TWTKVDMVFSVGSVALELFTADPDNPIGDLEGASLSRASLSNTNVKLRMISDGSIESELL IDSFNIRDSRFQETNKFRKIMSSTNDQGSQFMASVTISGGVERNLVALLTIDSPRIIFAL DYIFALRNFVMSALETDEGPLAEASEESSESEDDLSERNDKVKETNEAIPVSFQVNIVDS QVILIANPGISNSEAIVLSTKQILVSQQHALTLQIEEVGMFLCRMDKFETSRLRILDDFA IAGSMDNRSLGVNQSIQSIQIDVDPLVLRVSLRDILLATQIFNKASEMSSPNKGKPEIQG EAKRLGTSKASGKSLRRRTASGKEPSTAARQGAKSSATARSQTSQFQQGPGRQPASTIVK REGLSANFAGMRVILIGDQHELPLLDLSVKHFNARVKDWSGELDADTSIELFMNIYNFSK SAWEPLIEPWQLDFHMSRSVQQEKLSIDLISRKMLELTITSQTIALASKAAQFMQQDEDI LTKPRGADSPYRIRNQTGFPLHVWAASDPLLGEPMAVKLEDGEQVPWRFEEWEKMRENLS PDGSSGIVGIKIENSGFESITEIPVNKEGETLYTLRPPKDNTLHRLLCEVHLGTDNVKYI TFRSPLIIENNTQIPVEIGVLDVEAQHIVRVYKILPGESQPAPIETAYHQSVVVRPDAGF GYNWSQDHLFWRTLLKKPTKCLNCNSEEGNNAPPFYFQMHATFSRNNPVAKLYPYMRIQL SAPLEVQNLLPYDFKFRIYDKHTKKEWTNFLRKGGLSPVHVIELSHLLLMSIDMQDTVYS ASDFAIINSDSTEFDKETTLVAKDNQGLELRLRLHYFPIANSGGAFRVAVYSPYVILNKT GLTMMVKSKSLLQSAKVAAGQMQTSAGSSQRAVPYMFSYPNDDRQNRAVLKVGDSIWSRP HSFEAIGNVADVVLPSSTKETELHIGISVDEGEGKYKMTKIVTLTPRFILKSKLSEVIQI REPGTGSKNIMTLNPGELLPLHFLKASERKQLTLLFPGINNRWSSSFNISDLGSVHVKMH KANQRQSLIRIDILQEKATIFLHLSIEKKNWPFSMRNESSQEFTFYQADPNQDDDEEKES DFRPVYYKLPPRSIMPYAWDFPAAKSKELVLMVHNQKRHVRLAEIGNLVPFKVETGVIGE DGNPIKKTIEINVRADGPTQTLVLSNYRPSKSLYKPKTNASSSSIATSAGFEVKDGDSDI TFQVQIRFAGIGISLINRQIKELAYITFRDLEVKYNESSLLQTLNVLLKWIQIDNQLYGG LFPIILYPSVVPKTGKEMDVHPSLHTSITRVKDDSYGVLYIKYATFLLQQMTLEIDEDFI YALLDFSKIPGASWMEYDDGKFAGQDMYFELLNIQPAQLDISLLRTEVVNVEDKTSSRNP LLFILNVFTMAIGNINDAPVRLNSLMLENARVSMPVLARHLQTHYSNEFLYQIHKILGSA DFLGNPVGLFNNISSGVWDIFYEPYNGFIMTDRPTELGLGLAKGATSFFVQVYGHRLHEG LAAATLDKQFQDRRRISRARNRPKHALYGVTSGADSLITSFASGFGGLARKPLEGAEREG ALGFLKGLGKGVVGLATKPAIGVFDLASNVTEGIRNTTTVFDAEGLDRVRLTRYIGQDGV VRPYSQREALGQFWLKQLDNGKFFDDEYIAHLELPEQDLVVMLTYSRIMLVKAKRLYCEW DLPLNELQTISMEKTGIALMLRGGRQGPFIPTRDESSRKFLFKKIGLAVNSFNSTAAVS NT seq 9360 nt NT seq  +upstreamnt  +downstreamnt atgttggcatttggaggttggttttcagaatggctaatcccgagtttggctgacatttcg gtctttctcagtggcgatgtacgattacggaaccttgagctgaagaaagaagctctggat cagatgaagctccccttaaatgtcatggaagggcatctgggacagcttacgctgcaaatc ccctggagtaatctgaaaggaaagccggtgaaagtaattatcgaggatgtctatctacta gcgaacccaaaggccgatcaggagtataacgaagaggaagagcaacggcggaaacaagct gtcaaacaagagaagcttcagaatgccgagttacttcaagatagaaacaccgaagggatg tcagtggaggagcttcagaaaaaccagagcttcacaaacagtctggttaccaaaatcttg gataatcttcaaatcactgtgaaaaacatccatatccgatacgaggattctcttagcact ccagggcacccgttttcccttggattcacgctcgaggaattttctgccgtctcaaccaac gaaaattgggaacctaactttatccaggataacgtctctgttactcacaagctcgccaag ttgggttcgttggccatttattggaacacagactccaaacattttgggggtcgccctgat gcccatgcaacgatggtaaaaggtttcaagggtctcatagcgtctgagagcaatataccc tccggccaccagtttgtgttaaagcctgtaagcggcactggccatcttgaggtaaacaaa actggtagagcagatgtccctaagatggtagcccggatgatattcgacgaaattggtttt attctcgatgaggaccaatatagagacgtgcttatgatggttgacaatttccacttttat ctgcgtcatcagcaatacaagaggtatcaaccaaaaggaaagtccccaaaggaggaccct atggcgtggttcctttttgccggtaacgctgttttgagcaaaatacacgagaaaaataag aaatggtcttgggactacttccgtgagagaagagatgacaggaaacagtacattaagttg ttcaagcaactgaagcagtatgaacaactagcggcatccgaggcggaagaattaaagaaa cttgaatggaaactgtcatatgaggatctaaggttctaccgatctcttgcaagaaatcag ctgcggaaggaccgtgcgttagtcaaaaaaccagagcatcagggggcgcaaggatgggtt tcatggatgtggggctctgttcaaaagaaagaggaagaacccagcaccatcatgactgac cagcaacgtaaagaactttatgaggcgatcgattgggatgagaagaaggccatagcagaa tccatagaccttccacgagattctgttaaaatgcaggttgaggcgagtttgagaactgga agcttcaccctcaagagagacccccatggggacggagcggaaatactggcacttctgttt gacacgttcaagtcaagggtcctgcaacgtccagattccttctacggcgagcttagcctc ggagggttaagagtttatgatggcacaaccaagggatccctatatccccagatcgtgaga gtcaaggatgcggtctccgcgttaggacttgatgagctggatgacgatgacgaggatgtc ccaaaggaatcaaaccccgatgcaccattctttcaggcatcatttgagcgtaaccctctc gatgagagcgctgattcggcagttacaatgaagatgaggagcatggaaattatctacaac cctatcttcgtggaggaaatttacaatttctttaaacccccggagcgacatatggagagt attggtgctctgatggaatcggctggtgctactgtagaaggtatccgacaacaaacacgg gcagggctagagtttgctttggaagaacacaagacactcaacgccaagttagatctacaa gcacctctgattattatacctgaaagtatttgcgacgagaagtcgaattgcttaattctt gacgccgggcatgttagcctgacgagcgacctggtaaaaaagggagatatcagagagata cattccaaacagcggcaacaatatagtcaggaggattatgcaaggctagagtctttgatg tatgacaagttttccttgaatttagaatcaacgcaggttctcatcgggccttctgtggaa gaaacaaagctacagttgcgcgccaagtccgacaggaagcaccttcatattgttgatcgg atcaatattaatttcacagtcgatatatctattctcccaaaagcatcaaaccttacaaag ttccgaatgtcgggccatcttcccgtccttcatgcttctctgtcggacaaaaaatacaaa gccttgatgaaaataattgatgtggcaatcccgaaactaggccgcgaagattcacccaac ccccgaaagtctgtgcgccaacccgcccaggattggaaatctaagcccatgcctaaccaa actcacgagcacttcgaggaagcatctgatggtattcagaatgattcgcctagtacacac cagagaacattcgagctcaagtttactgtgggggagttacgaggatctctattccgggca gatccagaggggaagaaccccgataagcagctggttctcctagttgccgaacactttgcc ttagatttccacatcaggccttttgatatggctgcagaagtaattctaaagtcattaaac atcgaggatttgatagatgacgatccatccactactttcaagcgaattgttacctctgat acgcttcaagagcaatcaaatgacaatccccttttcttcgtcaagtacgtgaaggtaaag cgagagtctccagaatttatgacagtttatgaggctattgagacaaacgtggatgtttct atatctacaattaatgttgtgataaccagaaagactgttttaacacttcttgattttgcc atcacgacctttacaaatcccggcaataatcaaaccaaagccgcgatccagtccactaaa ggcgctacatatagctctggagaggaggcgtcggacctggctattcccaacgatcccctg gaagccgagaaaatccgcgttaagatcaatttggacagtataagcctcatcctcaataat gacggtatacgcttagcgaccctcagccttgctagtgccgacgttggtatgtttcttatg gggaaaactatgcggatcggagcacggcttggaaacttttccctctttgacgatatcaat gaaggcgctgaagagaattcgccattgcggcagcttgttactatccagggtgatgaactg gcagatttccgatacgaaacatttgatccagaagcaatccaatcatatcctggctacaat tcctcaatctacctccgttccggctccattaaagtcaactttgtagaggaaccctttcgg aagatcattgacttcgccgttaagttcggaaaaatgcaagccctttttaacgccgcacgt caagctgccatgaatcaagctagccaaatgcaagaaaacgcaaatcagattcactttgac atcttggtcagaactcctattatagtctttccgcgaacaaatttcgctcatcatgcggag cgggacctccttacagcatatctcggagagctctacgcacagaacaaatttgttcctctt aataattcagaagattctgctgttgtgaataaaatctccgctggaatccgtaagacgcga ctaacgtctgtcttctactttaatcaaggtcaaaaagaggagctagagctcttggacaaa ctagatatatcttttggggttacatatctcgagcatacttgcaatgccgagcgaccagac ctcgagatcgagggctcaatgtccgatcttaatctcaagttaacccaaacgcagttcaag ttcttactagaactctcccgatcaattccggcggtctttacaagcgatcccaaagaggag gggctcgtcgaacagttgcctgtggagaatattgagccagcgaaaaaggcaatccaacaa acgagcgaggagtcagcccaagtcgtaaatttgaatccagaactaggcgtcagctcggat acctggaccaaggtggacatggtcttcagtgtagggagcgtagccttagaactgttcact gctgacccggacaaccctattggcgacctcgaaggtgcaagcctatctagagcttcccta agtaatactaatgttaagctccgaatgatcagcgacggctctattgaatcagagcttcta atcgattccttcaatattagagatagccggttccaagaaaccaataagttccgcaagatc atgtcgtctacgaatgatcaagggtcacaatttatggccagcgtcacgatctcaggtggc gtagaacgaaaccttgtggcacttctaacaatcgatagtcccagaattatctttgccttg gattatatcttcgccctccggaactttgtgatgtcggcattagaaactgatgagggcccc ttggcagaggcgtcggaagagagttccgagagtgaagatgatctcagcgagagaaacgat aaagtcaaggaaaccaacgaggcaatacctgtttccttccaagtcaatattgtcgattcc caagtcatcctgattgccaaccccggaatcagtaactcagaagccattgtcctaagcaca aagcagattctggtttcacagcaacacgctctaacccttcaaattgaggaagtgggaatg ttcttatgccggatggataagtttgaaaccagccgtctccgtattttggacgactttgca atagccggatcgatggacaaccggtcacttggtgtgaatcagtccattcagagcatccag atagatgttgacccattggtcctgcgagtatctttgcgcgatatccttctagcgacccaa atattcaataaggcatctgaaatgtcttcacccaataaaggcaagcctgagatacaaggt gaggccaagcgccttggcacctcaaaggcgtctgggaaatctctcaggcgaagaactgcc agtgggaaagaaccttcaactgcggcacggcaaggtgcaaaatcttctgccactgctagg agtcagacatctcaattccagcaaggccctggtcgacaacccgcttcgacaattgtgaag cgggaagggttgagcgccaattttgctgggatgcgagtaatactgatcggagaccagcat gaactaccattattggacttgagcgtaaaacatttcaatgctcgagtaaaggattggtcc ggagagttggatgcagacacaagtatcgagttattcatgaacatctacaacttttcgaaa tctgcatgggaaccattgatcgaaccatggcaattggactttcatatgtcacgctcagtt cagcaagagaaactctcaattgatcttatctcccgaaagatgttagaattgactatcaca tcccagacaatagctttagcttccaaggcagcgcagttcatgcagcaagacgaagatata ctaacaaaaccgcgcggcgctgattccccctaccggattcgcaaccagaccgggttccct ttgcatgtatgggctgcttccgacccacttctaggagaaccaatggcagttaagctcgaa gatggggaacaagtgccttggagattcgaagaatgggagaagatgcgggaaaacttgagc cccgatggatctagtggcattgtaggcatcaaaatcgaaaattcagggttcgagagcata accgaaatacccgttaataaggaaggcgagacgctctacacacttcgtccgccaaaggat aataccctccaccgtctactatgtgaggtacatcttgggacagataacgtcaagtacatc accttcaggtcacctctcatcatcgaaaacaacactcaaattcctgtagagatcggtgtc ttagacgtcgaagctcagcatattgtcagagtttataaaatactaccgggtgaaagccag ccagctccaatagagaccgcatatcaccaatcagtagtggttagaccagatgctgggttc gggtataattggtctcaagaccatctgttctggaggacccttttgaaaaagccgaccaaa tgtctcaactgcaatagcgaggaaggaaataatgcgcccccattttacttccaaatgcat gccaccttctcacggaataacccagtcgcgaaattatatccgtacatgaggatccagtta tctgcacccctcgaggttcaaaaccttcttccttatgacttcaaattccgcatatatgac aagcataccaagaaagaatggacgaattttcttcgcaaaggcggcttgagcccagtccat gtgatcgaactttcacatctacttctcatgagtatcgatatgcaagataccgtttatagc gccagcgacttcgctataatcaattccgatagcacagagtttgataaagaaacaacgctg gtggcgaaagacaaccagggcttggaactaaggcttcggctacattacttcccgattgct aacagtggtggcgccttccgagtcgcagtctatagtccttacgtgattctgaacaaaact gggttgacgatgatggttaagtctaagtctctgttacaatccgcaaaggtcgccgcaggg cagatgcaaacgagtgcaggatcctctcaacgagctgtcccctacatgttttcctacccg aatgatgaccggcagaaccgtgcggttctcaaagtaggagattcgatctggagtagacct cacagctttgaagcgatcgggaacgttgcagacgtagtcctcccgtcctcaacaaaggaa accgagttgcatatcggaatatcagtggacgaaggagaaggaaaatacaaaatgacgaaa atcgttactttgactcctcgattcatccttaagagcaaattatccgaagtgattcagata agagaacctggcaccggttcaaagaacatcatgactctaaatcccggagagttacttccc ttacatttcctcaaggcttctgagcgtaaacagctgactctactcttccctggcatcaat aatcgatggtcatcgtcttttaatatctctgatttgggaagtgtacacgttaagatgcat aaagctaaccagcggcaaagccttatacggatagacattttacaagagaaagctactatt tttctacatcttagtattgaaaagaagaactggccattctctatgcggaatgagagtagc caggaatttaccttctaccaagccgaccccaaccaggacgatgacgaagaaaaggagagc gacttccgtccagtctattacaagcttccgccccgaagcattatgccttacgcctgggat ttcccagctgctaagagcaaagagcttgttctgatggttcacaaccaaaagcgacatgtc cgccttgcagagatcggtaacctagtgccttttaaagtggaaactggcgtaattggtgag gatggcaatccaataaagaagacaattgagatcaacgttcgagcggatggtcccacacaa accttagtcctttccaactaccgaccttccaagagtttatacaaacccaagaccaacgca tcgtctagtagcattgcgacgagtgccggcttcgaagtgaaggatggggacagtgacatt acttttcaggtccaaatccgatttgctgggatcggaatttcgcttatcaacagacaaatc aaggaattggcttacatcactttccgcgacctagaagtgaaatacaatgagtcatccctt cttcaaaccctcaacgttcttttgaagtggatccaaatcgacaatcaattatatggagga ctttttcctattattctctatcctagtgtcgtaccgaagacaggtaaagaaatggatgtt cacccctcgcttcatacatcaatcactcgagtgaaggatgattcatacggtgtactctat attaaatatgccacattcctattgcagcagatgacgcttgaaatcgatgaggactttatt tatgcgcttctcgacttttccaagatcccaggtgctagttggatggaatacgatgacggg aaatttgccgggcaagacatgtactttgagctgctgaacattcaacccgcacagcttgat atttcacttcttcggacagaagtagtcaatgtcgaggacaaaacttcatcacgcaacccc ttgctgtttatcctaaacgtctttacaatggcgatcggaaatatcaatgatgcgccggtg cgcctaaattctttgatgttggaaaatgcaagagtttcaatgccggtccttgcccggcac cttcagacccattacagcaacgagttcttgtaccaaatccacaagattctagggtcggca gactttttgggtaaccccgttggattgttcaacaatatcagttctggtgtctgggacata ttttacgagccttataacggcttcatcatgacggatcgtccaaccgaacttggtcttggg cttgccaagggcgccaccagcttctttgtccaagtttacgggcaccgtttacatgaaggc ctcgctgcggcaaccttagacaaacagttccaagatcgtaggcgcatttcacgagcacgg aaccgcccaaaacatgcgttatatggtgtaacatctggcgctgactcactcatcaccagc ttcgccagtggcttcggtggacttgctagaaagccgctggaaggcgcagagcgtgaaggc gccttaggcttcttgaagggacttggcaagggtgttgttggtctggctactaagcctgcg attggagtctttgatctcgcgtcaaatgtcaccgagggtatccgtaacacaacgaccgtc tttgacgcggaaggactggaccgggtccgcctcacacgatacatcggccaggatggggtt gttagaccgtactcacaacgcgaagcattaggtcaattttggctgaagcagctagacaac ggaaagttctttgacgacgaatacattgctcacctagaactccccgagcaggacctagtc gtaatgttgacatattcgcgaatcatgcttgtcaaagctaaacggctttactgtgaatgg gatcttcccctaaacgagcttcaaacaatcagtatggagaaaacaggaatagctttaatg ctacgaggtggtcgacaaggtccctttataccaaccagggacgagtcatcgcggaagttc ttattcaagaaaattgggctcgctgttaattctttcaacagcacggccgctgtttcttaa

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