Tuber melanosporum: GSTUM_00003795001
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Entry
GSTUM_00003795001 CDS
T01282
Name
(RefSeq) hypothetical protein
KO
K18716
nucleoporin NUP42
Organism
tml
Tuber melanosporum
Brite
KEGG Orthology (KO) [BR:
tml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tml03019
]
GSTUM_00003795001
Messenger RNA biogenesis [BR:
tml03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
GSTUM_00003795001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-CCCH_4
zf-CCCH
zf_CCCH_4
zf-CCCH_2
Torus
Motif
Other DBs
NCBI-GeneID:
9181491
NCBI-ProteinID:
XP_002837590
INRA:
GSTUM_00003795001
UniProt:
D5GB88
LinkDB
All DBs
AA seq
536 aa
AA seq
DB search
MSQVCRFYQRGHCKFGSNCNFLHPGAITSAPNAFGGARNSFGGGGIQTKLTDGFTIPSAD
TIRLDLSERPTWCLSSYAPSKDSPAQLIDGKDISPEEARVMAYRLRAEGIPQAYEVEWNR
LTSEVSSQIRNILDNIPGAIEFLKNAQGAPSRYNSARASSQQQTSPFGDQNSQQGIGASS
SSAQTPSSSPFGQVQQPRSASGFTSAFSTPTPFGARPTPAFGQSPFGQQVAQQTAQQPAA
SASAAPVFGQPAFGTPSQPQSAFGRPAFGQPAFGQPAFGQSSSLGSQPSPFAAAASNAAP
APPSAFGQPAFGVSSGPKPAFGQPAFGKSAFSQAQSSPFAAAATSPFVQAAGSSTTPFTQ
VPPTSSFGQSSQSQTASPANPFGSPPQQGAANPFQQTQAAQASPSPFSSTNPFQQSQQQQ
QATSTPFSQATQGPAQAPTSPFGQPTQPVNSFGSPAPQSSPFSTQNPFQGAQQGQASSSA
LRTHEMNPQLREQQKTKKWDDPVIEYTPEEQAMFSAGSFVLGQVPTVAPSRNMCWG
NT seq
1611 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcaagtctgcagattctaccagcggggccactgtaaatttggttccaactgcaat
ttcctacacccaggtgccattacctcggcccctaacgcttttggtggagctcgcaatagt
ttcggtggtggaggcattcaaacaaagctgaccgacgggtttactatccccagcgcggat
acgattagattagatctgagcgaacggcctacctggtgcctatcaagctatgcccccagc
aaggattcgccagctcagctgatcgatgggaaagatatctccccagaagaagcgcgcgtt
atggcatacaggttgcgagccgaggggattcctcaggcatatgaggtggaatggaataga
ttgacgagtgaagtgtcgtcacagatcagaaatatactcgataatattccaggcgctatt
gaatttctcaagaatgcccagggcgcgccatctcgatacaactcagctcgggcttccagc
cagcagcagacttcgccatttggtgatcagaattcacagcagggtattggtgctagctcg
agttcagctcagacaccatcatcatcaccttttggtcaagttcagcaacctcggtctgct
tcgggcttcacctccgcattttccacgcctactccttttggagcccgacccaccccagcg
tttggccaaagcccattcgggcagcaggtagcgcagcaaaccgcacaacagccggcagcg
tcggcgtcggcggcaccggtatttgggcagccggcttttgggaccccatcgcagcctcag
agtgcatttggcagaccagcttttgggcaaccagcctttggacaaccagcttttggtcag
tcctcgtcattgggatcgcagccttcaccctttgccgcggcagcctcaaacgctgctccg
gctccgccgtcggcttttggtcagccggcattcggggtgtctagtgggccaaaaccggca
tttggccaaccagcgtttggaaagtctgccttctctcaagcccagtcgtcgccttttgca
gctgctgcaactagtccatttgttcaagctgctggatcatccaccactccattcactcaa
gttccccctacatcgtcattcggccaatcctcacaatctcagactgcctctcctgcgaac
ccattcggatcgccacctcaacaaggcgctgcgaacccattccaacaaactcaggcagcc
caagccagtccatcgccattctcaagcacaaatcccttccaacaaagtcagcagcagcaa
caagctacaagcactcccttctcacaagctacccagggaccagcccaagctcccacctcg
ccgttcggccaaccaacccaacccgtaaactccttcggctcaccagccccgcagtcatca
cccttcagtacacaaaaccctttccagggtgcccagcaggggcaagcttcttcttccgct
ttgcggacacacgagatgaacccccaacttcgcgagcagcaaaagactaagaagtgggat
gatccggttattgaatacacgcccgaggagcaggctatgttttctgcgggttcgtttgtg
cttgggcaggtacccacggtcgcgcctagccgcaatatgtgttgggggtga
DBGET
integrated database retrieval system