Tuber melanosporum: GSTUM_00003809001
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Entry
GSTUM_00003809001 CDS
T01282
Name
(RefSeq) hypothetical protein
KO
K14397
cleavage and polyadenylation specificity factor subunit 5
Organism
tml
Tuber melanosporum
Pathway
tml03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
tml00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
GSTUM_00003809001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tml03019
]
GSTUM_00003809001
Messenger RNA biogenesis [BR:
tml03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor Im (CFIm)
GSTUM_00003809001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NUDIX_2
Motif
Other DBs
NCBI-GeneID:
9187127
NCBI-ProteinID:
XP_002835068
INRA:
GSTUM_00003809001
UniProt:
D5G3U6
LinkDB
All DBs
AA seq
261 aa
AA seq
DB search
MSTITSTALQSSQAPILPASFSANQPKTIRLYPLSNYTFGTKENQPEEDPSVLARLQRLQ
EHYEQYGMRRTCEGILVCHEHCHPHILMLQIANAFFKLPGDYLHHHESELEGFKSRLNER
LAPVGSQFSGEGVNDEWEIGDTLAQWWRPNFETFMYPFIPAHVTRPKECKKLYFIQLPRS
KVLSVPKNMKLLAVPLFELYDNTARYGPQLSAIPHLLSRYNFEFVDENGKVIAVTPGGGP
DGEPQTKVLAGGEENGDIKTE
NT seq
786 nt
NT seq
+upstream
nt +downstream
nt
atgtcgacgatcactagtacggctctccagagctcacaggccccaatcctgccggcttcc
ttctccgccaaccagccaaagaccatccgtctctacccgttatctaattatacttttggt
actaaggagaaccaaccggaagaagacccctctgtccttgcccgtctgcaacgcctacaa
gaacactacgagcagtatggtatgcgacgcacctgtgaaggtatcctcgtttgccacgag
cactgtcatccgcacatcctcatgcttcaaattgccaatgccttcttcaagttgccaggc
gattacctccaccatcacgagagcgagctggaagggtttaagtctcgtctgaacgaacgc
cttgctccggtcggcagccaattttccggcgagggtgttaatgatgaatgggagattggt
gatactctcgcccagtggtggaggccaaactttgagacattcatgtacccttttatcccg
gcgcatgtcaccaggcccaaagagtgcaagaagctatattttatccagcttcccagaagc
aaagtactatcggttccgaaaaacatgaaattactggctgtaccactgttcgagttgtac
gataataccgcgcgttacggaccccagctttctgcaatcccccacctacttagcagatac
aactttgagttcgttgatgagaacggaaaggttattgcggtcacccccggtggtggtccc
gacggggagccgcaaacaaaggtccttgcggggggggaggagaatggggatatcaaaacc
gaatag
DBGET
integrated database retrieval system
