Tuber melanosporum: GSTUM_00003820001
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Entry
GSTUM_00003820001 CDS
T01282
Name
(RefSeq) hypothetical protein
KO
K00787
farnesyl diphosphate synthase [EC:
2.5.1.1
2.5.1.10
]
Organism
tml
Tuber melanosporum
Pathway
tml00900
Terpenoid backbone biosynthesis
tml01100
Metabolic pathways
tml01110
Biosynthesis of secondary metabolites
Module
tml_M00367
C10-C20 isoprenoid biosynthesis, non-plant eukaryotes
Brite
KEGG Orthology (KO) [BR:
tml00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
GSTUM_00003820001
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
tml01006
]
GSTUM_00003820001
Enzymes [BR:
tml01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
GSTUM_00003820001
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
GSTUM_00003820001
Prenyltransferases [BR:
tml01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
GSTUM_00003820001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
polyprenyl_synt
DUF6559
Motif
Other DBs
NCBI-GeneID:
9187137
NCBI-ProteinID:
XP_002835078
INRA:
GSTUM_00003820001
UniProt:
D5G3V6
LinkDB
All DBs
AA seq
391 aa
AA seq
DB search
MATTRPQFEEVFTNVIVPELVAEVRKTQISENAIQWIERNFLHNTLGGKYNRGMTVPDTY
RLLAGKETLSLAEYKLSAILGWCTELLQGMFLVADDIMDSSKTRRGSPCWYLMEGVGSIA
INDSFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDKIGA
KYFKGTDYYIDLVELFHDVTWKTELGQLVDLLTSPEGSIDLNRFNYDKYYFIVRYKTAFY
SFYLPVALAMHQAGIATPDNLTRARDVLIPLGEYFQVQDDYLDCYGNPDYIGKIGTDIMD
NKCGWLVNKALEIVTPEQRKLLEDNYGQKNAAAEKKVKDLYLELKLEDHYRSYEAESIAM
VKGLIDNVDESQGLKRSVLEGFLNKIAGRDK
NT seq
1176 nt
NT seq
+upstream
nt +downstream
nt
atggctaccacacgtccacaattcgaagaagtcttcactaatgtcattgtccctgaattg
gttgctgaggttaggaaaactcagatttctgagaatgccattcaatggatcgagaggaac
tttctccacaatacccttggtggaaagtacaatcgtggaatgactgttcctgacacttac
cgtctcctcgctggcaaagagacgcttagtctcgcagaatacaaacttagcgcaattctc
ggatggtgcactgaactgcttcaaggaatgttcctcgttgccgatgacataatggatagt
tccaagacgcgccgaggctccccctgctggtacctgatggaaggtgttgggtccattgct
atcaatgactcgttcnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnngataagatcggggcg
aaatactttaaaggaaccgactactacatcgaccttgtcgagcttttccatgatgtcacc
tggaaaaccgaacttggtcagcttgtggaccttcttacatcccccgaaggtagtattgac
ttgaatcgctttaactacgacaagtactacttcatcgttcgctacaagaccgctttctac
tccttttacctcccagttgctcttgccatgcaccaagccgggattgccacgccagacaac
ctgactcgtgctcgcgatgttcttatacccctcggtgaatacttccaggttcaggatgac
tatcttgattgttacggtaaccctgattacattggtaagatcggcactgatatcatggat
aacaagtgtggatggttggtaaacaaggcgcttgaaattgtgactcctgaacagaggaaa
cttttggaggacaactatggtcagaagaatgcggctgcggaaaagaaggtcaaggacctt
tatcttgagttgaagcttgaagatcattataggagttacgaagcagagagtatcgcaatg
gttaaggggttgattgacaatgtggacgaatctcaggggttgaagaggtctgtgcttgaa
ggtttcctcaacaagattgctggaagagataaatag
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