Tuber melanosporum: GSTUM_00003836001
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Entry
GSTUM_00003836001 CDS
T01282
Name
(RefSeq) hypothetical protein
KO
K17600
vacuolar protein sorting-associated protein 54
Organism
tml
Tuber melanosporum
Brite
KEGG Orthology (KO) [BR:
tml00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
tml01009
]
GSTUM_00003836001
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tml04131
]
GSTUM_00003836001
Protein phosphatases and associated proteins [BR:
tml01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
GSTUM_00003836001
Membrane trafficking [BR:
tml04131
]
Endosome - Golgi transport
Tethering complex
GARP complex
GSTUM_00003836001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps54
Vps54_N
EXOC6_Sec15_N
Syndetin_C
UBR4
PA28_N
Motif
Other DBs
NCBI-GeneID:
9187151
NCBI-ProteinID:
XP_002835092
INRA:
GSTUM_00003836001
UniProt:
D5G3X0
LinkDB
All DBs
AA seq
984 aa
AA seq
DB search
MGLEEHIWLANVNQPKHQSVSPSPSVVDLVAAGGENGLLQITGGGGDASSANTSPRRRRA
RKGSLAMTPLSTVPTIYFDENFQLENPRTFDVVSERSDVIRPIPANSAEGSVSSSGASVS
SLNSQRRALATNAILQEKLSWYMDTVEVHLISSISTASSSFFVALGDLRELHSEATASVQ
KIQSLRKELVRLDEEQAVKGLEIVRLRRRRDNIARLEGAVKQTERVLQTFQGAERALADN
EVDAALAGVAETERLIFGRGQEGLLDLRPVRALESVNADLVHLRWRIGKAFEARFVEGLL
TDLRKHVERVPPAETLRRFAQSFQREQYQRFVSAKQQGNIQLPPRSSSLPPEYTQLSDSL
RSQLMRHLNGLQRAKHVNEAVQAYRDAVIKEAKNLIRRNMPSGDDNESVMSGMTNSRSGG
IRTSSQDKSLLLARSLRSLGPADSEDLLVRIYTGVSELVRRLGTQQKMLLDVTMRMGETG
VGGMLSPRLEQNGFHGATNGEQNPNGGPEPISMDISDLISSAVEIAQSQIVKIVNVRSEQ
VTLYGTDWFLRYFTLNRLFTQECEAVSVRVGSGLQNAVSAQIREFLNLWQRERIRMLAEC
LEKDKWAPREFEDERQKGVDRIMEAATRDPEDWVRAVANGNCAEANGVRAPAPGKPYAVV
DNQKFILPESGIMVLKELEGYLKLLIVIPGMATDIANSLLSFLKLHNSRTYQLILGAGAT
KTAGLKSITTKHLAMASQGISIITSLLPYLRETVRRRTPQSPTLQDFDKVKRTYQQYQSE
IHTKLISIMSERVKVHVLNLKAQDWGVARASEEAGAKYYMETLCKETTVLHKVLSKHLPE
ETLVGIMTPVFEDYRVRIGDGFRDVVVRSDGAKERMIQDAQMFIDRLSKLEGYSDSGDAI
LQIAQAKVVVGRSSTPAWWLLVVALSLSFFILVVCLFACFSLVRWRLYSILFSFIFPVLR
FCFTRLLSCLLACFLLFSSFPRWV
NT seq
2955 nt
NT seq
+upstream
nt +downstream
nt
atgggattggaggaacacatctggctagcgaacgtgaatcagccgaaacaccagtctgta
tcgccctcgccgagcgtagttgatctggtagcagctggtggggagaatggattgttacag
atcaccggaggtggaggggatgcttcatctgccaatacctcccctaggagaaggagggct
aggaaaggaagcttagcaatgaccccattgtcaacggtcccgaccatctactttgacgaa
aacttccagcttgagaacccccgtacgttcgatgttgtcagtgagcgatccgatgtcatt
cgtcccatacccgccaattcagccgaagggtccgtgtcatcgtctggagcctcggtgtcc
tcgctcaattcgcaacggagagcgctggcgacgaatgcgattctacaagagaagttatca
tggtacatggacacagtggaagttcatctgatatcttccatctcaacagcaagttcctct
ttcttcgtagctttaggcgacctccgggagttacattcggaagctacagcaagcgttcaa
aagatccaaagcctgcggaaagagttggtcagattggacgaggagcaggctgtaaaggga
ctggagattgttcgattgcgacgtcgaagagacaacatagcaaggctagaaggggccgtc
aagcagacggagcgggttctacaaaccttccaaggcgctgaaagggctcttgccgacaat
gaggttgatgctgctctcgcgggcgtcgcagaaactgagagattgatctttggaagaggc
caagaggggttactggacctccgccctgtacgagccctcgaatctgtcaatgcggatcta
gttcacctccgttggcgcataggcaaagcgttcgaggcccggttcgtagaaggtctactc
acagaccttcgaaagcatgtggagcgagtaccacccgctgaaactctaagacgctttgcc
caaagtttccaaagagagcaatatcaaagatttgtttccgcgaagcagcaaggcaatatc
cagctacccccccgttcatcaagcctacctccggaatacactcagctctcggatagtttg
cgatcccaacttatgcgacacctcaacggcctgcagcgcgcaaagcacgttaatgaggcg
gttcaagcgtatagagatgcagttatcaaggaagccaaaaacctaatacgaagaaacatg
cctagtggtgatgacaacgaaagtgtgatgtccggcatgactaactctcgctctggcggt
atccgaactagcagtcaggataaatccttgctactcgctcgctcactgcgctcacttggt
cccgccgattcagaagacttactcgtgaggatctacacaggtgtatctgaactcgtccgt
cgactaggcacccagcaaaaaatgcttctagatgtaacaatgcgcatgggagaaaccgga
gttggcgggatgctctcaccacggcttgagcagaatggcttccacggagccacgaacgga
gagcagaaccccaacggcggcccagagcccatcagcatggacatctcagacctgatcagc
tccgcagtggaaatagcacaatcccaaatcgtcaagattgtcaatgttcgcagcgagcaa
gttaccctctatggcacagactggttcctgcgatacttcaccctcaaccgattattcacg
caagagtgcgaagcagtaagtgttcgtgtcggtagtgggctgcagaacgctgtcagcgct
cagattcgtgaattcctgaatttgtggcagcgagagcgaatccgtatgctggcggaatgc
ctcgagaaggataaatgggcgccgcgcgaattcgaagatgaacggcagaagggtgtcgac
agaataatggaggcggcaacccgtgatccggaggattgggtgcgtgcagtagccaatggt
aactgcgccgaagccaacggcgtcagagcgccagcaccagggaaaccctacgcggtagtc
gacaaccagaaatttatcctcccagaaagtggaataatggtattaaaggaactagaaggc
tacctaaagctcctaatagtaattcccggcatggcaacagacattgccaacagcctcctc
tcattcctaaaacttcacaactcccgaacctaccaattaatcctcggcgccggtgccacc
aaaaccgccggcctgaagtccataacaacaaagcacctagccatggcttcgcaaggcata
agtataatcacctcgctgctaccctacctgcgcgagacagtacggcggcgaacgccgcaa
tccccgacgctacaagacttcgataaagtgaagcgcacctaccagcaataccaatccgaa
attcacacgaagctgattagcatcatgtccgagcgcgtgaaggtccacgtgttgaacctg
aaagcgcaggattggggcgttgcgagggccagcgaggaagcaggagcgaagtattacatg
gaaacactctgcaaggagactacagtcctgcacaaagtcctctcgaaacacctgcccgag
gagacattagtcgggatcatgacgccagtgtttgaagattatagggtcaggattggagat
gggtttcgggacgtggtggttcggagtgatggtgccaaagaacgcatgatccaagacgcc
caaatgttcatcgatcgcctatccaagttggaagggtactccgattctggtgatgcgatt
ctgcaaatcgcccaggcgaaagttgtagtcggcaggagttccactccagcctggtggctc
ttagtggttgccctttctctttccttttttattcttgtcgtctgcttgtttgcttgtttc
tctctcgttagatggcgtttatatagcattcttttctcttttatctttcctgtgttacgt
ttctgctttactcggttactttcttgtctgcttgcttgcttccttcttttttcttcgttt
cctagatgggtgtag
DBGET
integrated database retrieval system
