KEGG   Tuber melanosporum: GSTUM_00003904001
Entry
GSTUM_00003904001 CDS       T01282                                 
Name
(RefSeq) hypothetical protein
  KO
K14298  mRNA export factor
Organism
tml  Tuber melanosporum
Pathway
tml03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:tml00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    GSTUM_00003904001
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tml03019]
    GSTUM_00003904001
   03036 Chromosome and associated proteins [BR:tml03036]
    GSTUM_00003904001
Messenger RNA biogenesis [BR:tml03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     GSTUM_00003904001
Chromosome and associated proteins [BR:tml03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    GSTUM_00003904001
SSDB
Motif
Pfam: Beta-prop_EML_2 WD40_WDHD1_1st WD40 WD40_CDC20-Fz WDR55 WD40_Prp19 WD40_MABP1-WDR62_2nd Beta-prop_TEP1_2nd Beta-prop_RIG_2nd Beta-prop_Vps41 Beta-prop_CAF1B_HIR1 EIF3I ANAPC4_WD40 Beta-prop_WDR90_POC16_2nd Beta-prop_IFT122_1st Beta-prop_TEP1_C Beta-prop_EIPR1 Beta-prop_SPT8 Beta-prop_EML NBCH_WD40 Beta-prop_HPS5 WD40_like Beta-prop_NUP159_NUP214 Beta-prop_IFT140_1st SdiA-regulated eIF2A Beta-prop_WDR75_2nd Mala_s_1-like Beta-prop_IFT122_2nd
Other DBs
NCBI-GeneID: 9182385
NCBI-ProteinID: XP_002835137
INRA: GSTUM_00003904001
UniProt: D5G415
LinkDB
AA seq 358 aa
MSTLFGGNTASTAASTNNTQGDLSKDVEVTSPPEDSVSDLSFSSQSEHLAVSSWDSKVRI
YEISETGQSIGKALYDHQAPALSVHWSKDGTKVVSGGADKAARMFDLQSGQATQVAAHDE
PVSCVRMFQAPNAGEMLVTGSWDKTLKYWDLRQQQPAAMVQIQDRVYTLDVSQGLLVTGT
AERYINVINLANPTAIFKTIQSPLKWQTRVVSCFPDASGFAVGSIEGRCAIQYVDDKNAS
MNFSFKCHRETPSTGIANVYSVNAISFHPTFGTFSTAGSDGTFHFWDKDAKHRLKGFPSV
NWSIPAASFNRNGSIFAYAISYDWSKGHQANNPQYPIKVMLHPIKEDEAKPRPPAKKR
NT seq 1077 nt   +upstreamnt  +downstreamnt
atgtcgacactcttcgggggcaacaccgcctccacagctgcttccaccaataacacccaa
ggtgacctcagcaaagatgtagaggtcacctccccacccgaggacagtgtatctgatctc
tccttttcttctcaatccgagcatttggcagtttcttcctgggatagcaaagtgcgaata
tatgaaatatcagaaacgggacaatcaatcgggaaagctttgtatgatcatcaagcccca
gcactatcggttcactggtccaaggatggcaccaaagttgtctctggtggtgccgacaaa
gctgctcgcatgtttgaccttcagtccggtcaggccactcaggtggcagcccatgatgaa
cctgtaagctgcgtgcggatgtttcaagcgccgaacgccggtgaaatgcttgttacgggc
tcttgggacaagacactcaagtattgggaccttcgacaacaacagccagcggccatggtc
cagattcaagatcgtgtgtatacgctagatgtctctcaaggcttgcttgtcactgggact
gcggaacgatatatcaatgttatcaatcttgccaatcctaccgcgatctttaaaaccatc
caaagtccgctaaaatggcaaactcgggtggtaagttgtttccctgatgcctccggattt
gctgtaggtagtatcgaaggaagatgcgcaatacaatatgtcgacgataagaatgccagt
atgaacttttcctttaaatgtcaccgtgaaaccccctccactggtatcgcaaatgtttat
agtgtcaacgcgatatcctttcatcccacctttggaacgttttctactgctggttcggat
ggtacattccatttttgggacaaggacgcgaaacatcgtcttaaaggattcccctccgtc
aattggtccattccagctgcctcttttaacagaaacggatcgatattcgcttatgcaatt
agttacgattggagcaaagggcatcaggcgaacaatcctcaatacccaatcaaagtcatg
ctccacccgatcaaagaagatgaagctaaaccaaggcctcctgccaagaagcggtaa

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