Tuber melanosporum: GSTUM_00003968001
Help
Entry
GSTUM_00003968001 CDS
T01282
Name
(RefSeq) hypothetical protein
KO
K12200
programmed cell death 6-interacting protein
Organism
tml
Tuber melanosporum
Pathway
tml03250
Viral life cycle - HIV-1
tml03272
Virion - Hepatitis viruses
tml04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
tml00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
GSTUM_00003968001
03272 Virion - Hepatitis viruses
GSTUM_00003968001
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
GSTUM_00003968001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tml04131
]
GSTUM_00003968001
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tml04147
]
GSTUM_00003968001
Membrane trafficking [BR:
tml04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT associated proteins
GSTUM_00003968001
Exosome [BR:
tml04147
]
Exosomal proteins
Proteins found in most exosomes
GSTUM_00003968001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BRO1
ALIX_LYPXL_bnd
DUF416
Motif
Other DBs
NCBI-GeneID:
9182435
NCBI-ProteinID:
XP_002835187
INRA:
GSTUM_00003968001
UniProt:
D5G465
LinkDB
All DBs
AA seq
843 aa
AA seq
DB search
MTSSNILHVPFRKSAPLQLSTAIKQYISTKYDQHPDMFTTDLAAIDKLRSDAINVQEAHV
SGVMKISVYAAQLQWISGKFPIDIGADFTWYPALGYNTQRPVTQNNLQFERANVLYNLGS
LYSQLASSSPRTTAQGLKTACNYFCAAAGVFTYLKKEVLTELRSTPPEDMDAGTLESLEM
LMLAQAQECFWLKAAVDGHKDSLVAKLAAMVSDFYDLAGEFGMKSDSISSEWMHHLSAKH
HHFAAAAQYRAACDCLERSLYGEEVARLKDSLDAVNEALRGARYLNKVVLGDLQGLKEKV
TETLKGAEKDNDLLYFQAVPPASELPKIPRAPMVEPKIPREVSEAANLLSEGGAYGPPLF
SKLVPFAVHQAASIYAERRDRLVNNVLADKLESLTNKLHELLRSLNLPGSLQALEKPLGL
PPGLMSHAEEIKQQGGVATLLKSMDDIAKLKANDNAMYQEVLSPRLSLTRSALTRTQAVE
MLDTEAAEDERARGKHGTDQWNREPSSQAASKLMASVQEYAGILKSADNSDGLVKVKLNE
CEKSLRLLGGDIHSLQDFVPNSSRASLTPKMEREVAKLRQCLNEISRLESRRRRKIESLR
EKAKADDITSAILAEAARLERESPLQKLEPVHFEPLFESRLTAKYDGENTLLKEEAEVQK
DIISRTQEANSSFAACRKVDSSLKEREQALQTLENAHSKYREILDNLNAGRKFYNDLAKL
LARFRDECKDFVYQRRIEAGQFEVEITNAMQAVRLSQTPILQPTTQHYHHQSPPQQKLQQ
QQQHIPLQSPPLPGVGQQQRRVPPGTPLPAPVPTRAAIPPLSPGLWKGDATTAIRFAGEP
SKR
NT seq
2532 nt
NT seq
+upstream
nt +downstream
nt
atgacctcttccaatattcttcatgttccgtttcgaaaatctgccccgcttcaactatct
actgccatcaagcagtatatctccactaagtatgatcaacacccggacatgtttaccacc
gacttggcagccatagacaagctcaggagcgatgctatcaacgtacaagaagcgcatgtg
agtggagttatgaagatctcggtatatgcagcgcagttgcagtggattagcgggaagttt
cctatagatattggggcggattttacgtggtatccggcactagggtataatacacaacgt
ccggtcacccaaaataacctacaattcgagcgtgcaaacgtcctctataatctcggatcc
ctttactcccagttggcgtcctcctctccacggacaacagcccaaggcctcaaaacagct
tgcaactacttttgcgcagccgccggtgttttcacgtatctcaagaaggaggttctcaca
gagctccgtagcactccaccggaagacatggatgccggcactctggagtctttggagatg
ctgatgcttgctcaagcgcaggagtgcttttggctaaaagcggccgtggatggacataaa
gatagtttagttgctaagttggcggcaatggtcagtgatttttacgacctggctggcgaa
tttggaatgaagagcgactcgatctcttcggagtggatgcaccacttgtcagccaaacac
caccatttcgcagcggcagcgcagtatagagctgcctgcgactgccttgaaaggtcgctt
tacggggaggaagtagctcggctgaaggactccttagatgcggttaatgaagcactaagg
ggagcgcgatatcttaacaaagtcgttcttggtgatttgcaagggctcaaagagaaagtc
accgaaaccctgaagggtgcggaaaaggataatgatctactatatttccaagcagtccca
ccagcttctgagttgcccaagatacctagggctccgatggtggaaccaaagattccgagg
gaggtctcggaggccgctaatttgctttccgaaggtggcgcttacgggccgccactgttt
tccaaactcgtcccatttgcggtgcatcaggctgcaagtatatatgccgagaggagagac
cgattggttaacaatgtccttgcagacaagctagagtctctaaccaacaagctacatgag
ctcctccgatccctcaatctccccggctcccttcaggccctggagaaaccactgggacta
cctcctgggcttatgtcccacgcagaagaaataaaacagcaaggcggagtcgcgacgttg
ttgaagtctatggatgatattgcaaaattgaaggccaatgataatgccatgtatcaggag
gtgctctctcctcgcctctcgctcacaagatcagcgctaactaggactcaggctgtcgag
atgctagacaccgaggcagccgaagacgaaagggctagaggcaagcatggcactgaccaa
tggaaccgggagccttccagccaggcagcgagcaaactcatggcatcagtccaagagtat
gctggtattctgaaaagcgcggacaattcggatggcctagtcaaggtgaagctaaacgag
tgcgagaagagtttaaggcttttaggtggggacattcactctctccaagacttcgtcccg
aactcctctagagcatctttaacacccaaaatggaacgtgaggttgcaaaactccgccaa
tgccttaacgaaatttcccgcctagaatcccgcagaaggcgcaaaatcgagagtcttcga
gaaaaggccaaagccgacgacattacgagcgcaatcctagccgaggctgcgcgcctagaa
cgcgaaagtcccctccaaaagctcgaacccgtccacttcgagcctctcttcgaatcccgc
cttacagcgaaatatgacggcgaaaataccctgctaaaggaagaagcggaagtgcaaaag
gacatcatatcccgcacccaggaagccaactcctctttcgctgcctgcaggaaggtggac
tcttcactaaaggaacgagaacaggcgttgcaaaccctcgaaaatgcccatagcaagtat
cgtgagatactggataacttgaatgcggggaggaagttttataatgatttggcaaaatta
ctggcgaggttccgggatgagtgcaaggattttgtgtaccagaggaggatagaggcgggg
caatttgaagttgaaattacaaacgcgatgcaagccgttcggctctcacagaccccaatt
ttgcagccgaccacacaacattaccatcaccaatccccaccgcagcaaaagctacagcaa
cagcagcagcatataccactgcaatcgccgccgttgccgggtgtaggacagcagcagagg
cgggttccgcccggaacacctttgccggcgccggtgcccactcgcgccgctataccgccg
ctgtcgccggggctgtggaagggtgatgccacgactgctattaggtttgcgggggagccg
tcgaagcgttga
DBGET
integrated database retrieval system