Tuber melanosporum: GSTUM_00004028001
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Entry
GSTUM_00004028001 CDS
T01282
Name
(RefSeq) hypothetical protein
KO
K15147
mediator of RNA polymerase II transcription subunit 5
Organism
tml
Tuber melanosporum
Brite
KEGG Orthology (KO) [BR:
tml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tml03021
]
GSTUM_00004028001
Transcription machinery [BR:
tml03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
Middle
GSTUM_00004028001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Med5
Motif
Other DBs
NCBI-GeneID:
9184978
NCBI-ProteinID:
XP_002835232
INRA:
GSTUM_00004028001
UniProt:
D5G4B0
LinkDB
All DBs
AA seq
1005 aa
AA seq
DB search
MIHIFNHPHPAMSSSSGTSLRAQTYHGLFRKCLLKRTPVDTFGEYVSQLLLKSPLPSSSI
CPILLSPSVSSRVDPLHLEYIQCLVEKDIVSLPDVLVALLCTSSARPAVSTSSSSGHGAT
GGGNGMNTNREALEEDIFTVLATVVREHKPRSNDFVWATIQALSDWMEAVMAASGAGMLD
EPGDDVSGMTGSMDVGKGRLEALAELTIAIGGNEDVRRILGEGGRKERKLMFQTSLSLFM
QYIQVQNPTLAARMDALFRHQQSQQSPQQNRNQRSTKGAETIDGMMMGMGDGADNEPVVW
ARGGLFVWLNGLLAGRPQVDDEAVIGYLYSRYRNDINTLLVDFVTAVLDVLSNAILRSEA
ASTLFLLRSFLTNKVPILLSRLSPSPMTASYALSQALLRTDASTLANPPPSSFDPYSRDT
SPNADMLFNTLVDLRQEFLFACALHGVVGEEDIQGIIGELPLGALPVAGRYDAGDLMNQC
AMDPDRVERLLEEIEGVEGNSGAVVRAVVEIMRNMCEQKETMPLRSICSFLARKTSSLDV
MLLFVKPVYLLEPLCELLDTWRYEEDQGEYQPVYEEFGYILLLVTDLTSSSAPNTDSFIP
QLLSKGSTSQRIENFESSDKHAQLGGWIREIFEGEGISDGLMSSCRPQDFYRLVPTLFMQ
SVMACERGVLDIDTLKEGFAFLLEAFLLPSLVGGLGWLGNHLWESHEDISIPVQILHSLL
VPSSISSDASEVHKTVISISARHLERVLRELARRGTAGSHQSAVEGLVANLQPYTSFKRN
GAATRDELENWTHHAGGGGLVQSLGLAFQSLVNWSTSQGDINIVRPSATYTHRLILATWR
VSGARNTVGAIISEVVKCRIQGTAQGYAEDVAMSMILSMGPPTEEGGTGGGGGKMGLLEA
LRAEEAEESGNEGDKAEALRSVLRKVETQLTPFSPVHQHAAVGGGVDATGGQQPGMGVGG
DTQGVDLDLAMGDDGMAGLLGDGGLGEGELMGSGLLGDVSGMELV
NT seq
3018 nt
NT seq
+upstream
nt +downstream
nt
atgatacacattttcaaccacccccaccccgccatgtcttcctcatctggtacatctctt
cgcgcgcagacataccatggcctcttccgtaaatgtttgctcaagcgcacacccgttgat
acattcggagaatacgtctcccagctgttactcaaatctccactcccgtcctcttcaata
tgccctatactactttctccaagtgtttcgtccagagtcgaccccctgcacctggagtac
atccagtgtttagttgaaaaagacatcgtcagcctcccagacgttttggttgcactattg
tgtacgtcttctgccaggcctgcagtgtcaacatcgtcttcctcaggtcacggtgctacg
ggtggaggcaatggcatgaatacaaaccgggaagctctagaagaggacattttcacagtt
ctggcgacagtcgtgagagagcataaaccaaggtcaaacgactttgtatgggctactatt
caggcattgagtgactggatggaggctgttatggctgctagtggagcgggaatgctagat
gaacccggggacgacgtttcgggaatgacgggatctatggatgtcggaaaaggacggttg
gaagcattggctgagcttactattgctattggaggtaatgaggatgtgagaagaatacta
ggggaaggagggaggaaggagagaaaattgatgtttcaaacaagcttgagcttgtttatg
caatatatccaagtccaaaatccgacgctggccgccaggatggacgccttatttcggcat
cagcagagccagcagagcccacagcagaacagaaaccagcgaagcactaagggtgctgaa
acgattgacggaatgatgatggggatgggcgatggggcggataatgaaccagtagtctgg
gcaaggggtgggctgtttgtctggcttaatggtttgttggcggggcgaccgcaggttgac
gatgaagcggtgatcggatacctttatagcagatacaggaacgatattaacactcttctt
gtggacttcgtaactgctgttctcgatgtgttatctaatgccattcttcgtagtgaagca
gctagcacgctatttcttctccgttcttttctcacaaacaaggtccctatcttgctgtcg
cgtctgtcgccttctccgatgactgcatcttatgctctttctcaggctcttctcaggacg
gatgcctctacccttgccaaccccccgccttcctcgttcgatccttattcccgcgacacg
agcccgaacgcggatatgttattcaataccctagtagacttaaggcaggaatttctcttt
gcctgcgcgcttcatggggttgtaggggaagaagatatccaaggtatcataggagagttg
ccacttggggcattgcctgttgccggaagatacgatgcaggggatttaatgaatcaatgt
gcgatggaccccgacagagtggaaaggttgcttgaagaaatcgagggtgtcgagggaaac
tcgggggctgttgttagagctgttgtcgagattatgcggaacatgtgtgaacagaaagag
accatgccacttaggagtatatgcagctttctggcgaggaaaacaagtagtttggatgtc
atgttactttttgtcaaaccggtataccttttggagccattatgcgaactgctggatact
tggagatatgaagaggaccaaggcgaatatcaaccagtatacgaggagtttggatacatc
ctccttctagtcaccgacctgacatcatctagcgcaccaaataccgattctttcatccct
cagcttctgtccaagggatctacaagccaaaggatcgagaacttcgagtcgtcagataaa
catgcgcaacttggaggatggatccgggagatttttgaaggtgaagggataagtgacggt
cttatgagctcttgtagaccccaggatttttacagactggtaccaacattattcatgcag
tctgtgatggcttgtgaacgtggagttttagatatagataccctgaaggaggggtttgca
ttccttcttgaagccttcctacttccctctctagtaggcggcctcgggtggctaggaaat
catctatgggaatctcatgaggatatttccattccagtccagattctccactcccttttg
gtgccatcaagtatctcctccgacgcctcagaagttcacaaaactgtgatttccatatcc
gctagacatcttgagcgtgtgctcagagagctagcccggcgtgggaccgcgggtagccat
caaagtgctgtggaagggctcgttgcaaacctgcagccatacacctctttcaagcgtaac
ggtgcggctacaagggatgagcttgagaactggacccaccatgctggcggtggtggtctg
gtgcagtcactggggcttgcattccagagcctggtaaattggagcacgagccaaggcgac
atcaatattgttcgaccgagcgcgacctatacgcatcgtctgatactcgctacttggagg
gtctcgggagcaagaaacacagtcggagcaatcatcagcgaggtagtcaagtgtcggatc
cagggcacggctcaaggatacgccgaggatgttgccatgagcatgattctgtccatgggt
cccccaacagaagaagggggaaccgggggagggggtggaaagatggggcttttagaagct
ttaagggccgaagaggcggaagaaagcgggaacgaaggtgataaagctgaagcattgaga
agcgttttgaggaaggttgagacccagttgacgccattcagccctgtgcatcagcacgct
gccgttggcggtggagttgatgctacaggtgggcaacaaccgggtatgggtgttggtgga
gatacccaaggcgtagatcttgatcttgctatgggagatgatggaatggccggattgttg
ggtgatggagggcttggggaaggggagcttatgggaagtgggctgttgggtgatgtttca
ggaatggaattagtgtag
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