Tuber melanosporum: GSTUM_00004103001
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Entry
GSTUM_00004103001 CDS
T01282
Name
(RefSeq) hypothetical protein
KO
K08773
RalA-binding protein 1
Organism
tml
Tuber melanosporum
Brite
KEGG Orthology (KO) [BR:
tml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tml04131
]
GSTUM_00004103001
Membrane trafficking [BR:
tml04131
]
Others
Rho GTPase associated proteins
Rho GTPase-activating proteins
GSTUM_00004103001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RhoGAP
PH
PH_11
PH_8
Motif
Other DBs
NCBI-GeneID:
9184042
NCBI-ProteinID:
XP_002842493
INRA:
GSTUM_00004103001
UniProt:
D5G4H0
LinkDB
All DBs
AA seq
1580 aa
AA seq
DB search
MSHLPLHTPPTPPHFGLSDRGFPEHSTGTQDQLRVTVGSSASSLNNHYAGGNNTTGTLGH
SNNNIHPPSPNLYALQVNLQGEARTVYTHQGYPSSPRKLPPLSQHPQRDNLITHQDFDRE
INTGNSNSGKGGGGGRIAHQQVSITHPQKSPYPPSSPYNHHNHYSLQSTIPSRTPQDQLE
RLQPEASSVTGGFLGPLANDSSHRYDSGSSSPYSVSRSLSGGSSNSVHGTSRDRGQPLLS
VPETSSSAATTPAASPSMSSASFPRSIPRTSSIDSAISSASAQSGANHTSRDGNHSSAKE
VSPTPAEIQSLIQTAGSAESLIAYMMKEKASAASQNAQLWKLVDKQRAMIYGLNKDLERA
LKDKEKYRKALKEQRGQLAPLPTSSMDPSRTFNESPAPSESAAGDSPRDGQPEANPLVRS
ESMPLPDRSRSDSSSVQGDSMAPYPPANSMGDRITSSTNQGTRGPNGQLAPDGVTSSLGN
KHSDQSLGGQGNLQSGNSLPPMMESAEEGSAPLSKLDNVYPAIGTGPAKGPIPLRMKLGI
STAVAPTSGLGKSPLRKAPPAPLSLGLHTESKLHDDTDEDDNVSIDEIVGYQQLSSQKSK
EPEGTISDSDSEKSWQHTPVDKKAPSDFSSPEIEVHKSISLDRPAPSPQPAPGPRPQEKQ
ASTLPKHNEGLLSPAAAGFGKEQSAISPGIKQQFARAPLPSPGLPSSPRPIDRPLGSPMP
RIKSPGLPTTPRMSATPAPYGPGTPRMGLRMSASMPPRSPEYKGHEKNASASSLSSVGGF
TKPGSLDGLSNLLILPSAIPSVDSRVVSSRMKPARASMMPGSKPRPLSEDSVFTLGVFSR
ANGKELLRVEKDVGALPALDSRLRNYITYSVKVPDRSLFSGHAPAKIDARRNAIDEYFAG
VLGATMDERAALALCEFFSTDVVDNSVGRDSAPIFKDGSGITGTNQDGKPVKEGYLTKRG
KNFGGWKARYFVLNGPVLKYYESPGGSHLGQIKLQNAQIGRQSQNRGVKEAAEGANDADN
QYRHAFLVLEPKRKDSSTLVRHVLCAENDAERDEWVEALMQYVDKGGPDDDAHSTMSQVS
QTSATGREGKKKRYGQRHNKDSKEKNGDDCLQALSYEETVSGVAPARGPTPEDHQQAQAM
ENRPMVGPVPDRGPVASKQISGPTNGSVISDLAAWGSKFSAPTNHAEQKSAKKRSIWGFR
QRSSSDLTNQPQAAQPQQTYERIPVSRSVFGAPLEEAVHLSKPMGVDVHLPAVVYRCIQY
LDAKDAASEEGIFRLSGSNVVIKGLRERFNTESDYNLLDNDEYYDVHAVAGLLKLYLREL
PTNVLTTERREDFVKVTEMDDKAAKIAALNELVHTLPVENFELLRALSGHLIHIVENSDI
NKMTIRNVGIVFSPTLNIPAQVFSMFLHEYNHIFVRPEEGNLEALRSHHPKHPHQNPPST
PSPVSPRSPYPTPTDRRPSTTGSLLHPSNPNAAPLTPAMHSPLPPSRPAPQEPPITPRPQ
FASYEPAYGTVVTPTPTKQPAMGFPAPPPMLGDGLGDNGPSGAKARRRESSMMFMMGRKG
YNRGVNNGGSAMVMEDSVYE
NT seq
4743 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcatcttcctctccatactccgccaacaccaccgcattttggcctcagtgaccgg
ggcttcccagagcactctaccggtactcaagatcagttgcgtgttacagtgggctcaagc
gcttctagcctgaataatcactacgctgggggcaacaatactacgggtactttgggccat
agtaataataatattcaccctccttccccaaacctttacgccctgcaggtaaatttgcaa
ggtgaagcacggactgtctacacgcatcaaggatacccatcctcgcctagaaaattgcca
ccactatcccaacacccccagcgcgacaacctgatcacacatcaagactttgatcgtgag
ataaacaccggtaacagcaatagtggcaaaggcggcggcggaggtcgcatcgcgcatcaa
caggtctcaattactcaccctcaaaaatccccctaccccccatcatccccttataaccac
cacaaccattatagtctgcaatccaccatcccttctaggaccccacaagatcagttggag
agattacaaccggaggcatcgagcgtaacaggcggttttttgggtcctttggccaacgat
tcttctcaccgttacgattcaggatcttcctcaccctactctgtttcgaggtctttgtcg
ggaggctctagtaactctgtgcatggcacgagcagagatagaggacagcctttactttcc
gtccccgaaacttctagcagcgcggctaccactcctgccgcttctccctccatgtcgtcc
gcaagctttccacgctccattccacggacttcttcgatagattctgccatatcatcggca
tctgcgcagtcgggagctaatcatactagcagagatggaaatcacagctcggcaaaggaa
gttagcccgacaccggccgagatccagtccttaatccaaacggctgggtcggccgagtcg
ctaattgcttatatgatgaaggagaaggcgtctgcggcttcgcagaacgcacaattgtgg
aaactggtggacaaacagagggctatgatttacggcctgaacaaggacctggaacgcgca
ctgaaggataaagaaaagtacaggaaggcacttaaggagcagaggggtcagcttgcaccg
ctacctacgtcgtcgatggacccgtcgagaacattcaacgaatcgcctgcgccgagcgag
agtgccgctggagattcgccacgggatggccaaccagaagcaaatcccctcgttagatcg
gaatccatgccccttcctgaccgctcgagatctgattcgagctcagtccagggcgattcg
atggctccctatccgccggcaaactctatgggcgatcgcataacttcatccaccaatcaa
gggacgaggggccctaatgggcaattggcccccgacggcgtaacttcgtcgctgggaaac
aaacattctgatcagagtcttgggggtcagggtaatttgcagtctggaaattctctgccg
ccaatgatggagtcagctgaggagggatctgccccgttgagcaaattggataacgtatat
ccggccataggcactgggccggcaaaagggccaatcccgctacgaatgaaacttggtatc
tcaacggccgttgccccgacctcggggcttgggaaatcgccacttcgaaaggcaccccct
gctccgttgtcattggggttgcacacggaatccaaactgcatgatgacactgatgaagac
gacaatgtttcgattgacgagattgtaggctatcaacaactttcttcccaaaagtcgaaa
gagccggaggggacgatatctgatagtgatagcgaaaagagctggcaacatacaccggtg
gataagaaggctccttctgatttctcgtcccccgaaattgaagtgcacaagagtatatcg
cttgaccggccagctcctagtccccaaccagctcccggcccccgacctcaggaaaagcaa
gcttcaactctaccgaaacataatgagggactattatcgcctgccgcggcagggtttggg
aaggaacagtccgcaatttcccctggtatcaaacaacagttcgctagagctccattaccc
agtcccggattgccaagctcaccgagacccattgacagacccctaggttcaccgatgcca
agaatcaagtcacccggtttaccgaccacgccgagaatgagtgcgactccggctccttat
gggcctggaaccccccgtatgggcctaagaatgagtgctagtatgccacctagatcgccg
gaatacaaaggacacgagaaaaacgcttcggcgagtagtttgtcaagtgtcggtggcttc
acaaagcccgggtctctcgacggattaagcaacctccttatccttccttcagccatccct
tctgtggactcccgcgtagtatcttctaggatgaagcccgctagagctagtatgatgcct
ggtagcaagccccgaccgctaagtgaggattctgtatttacactcggggtattttctcgg
gcaaatgggaaggaactgttgcgggtcgaaaaggatgttggggctttacctgctttggat
tctcgattgaggaattacatcacttatagtgttaaagttccagataggagtcttttctct
ggacacgctccggctaagattgatgcccgaagaaatgcgattgacgaatactttgcgggg
gttttgggcgccactatggatgaacgtgcggcgctggcgctgtgtgagttcttctcgacg
gacgtagtggataatagtgttggccgggactcggctccgatattcaaggacggaagcggt
ataacaggcacgaaccaggacggaaaaccggtgaaggagggatatttgactaaacgtggc
aagaactttggcggatggaaagcacgctatttcgtgctcaacggtcctgtattgaaatat
tacgaatctccgggaggatcgcacttgggacagatcaagctgcagaatgctcagattgga
cgccaatcacagaaccggggggttaaggaagcggcggaaggtgcgaatgacgcggataat
caataccgacatgcgttcttagtcttggagcccaaacgcaaggattcgtccactctggtc
cgccatgttttgtgtgccgagaatgacgccgagagggatgaatgggtagaggctttgatg
cagtatgtggataagggagggccagatgatgatgctcattctacaatgtctcaagtatca
cagacgtcggcgactggtcgggagggaaagaagaagcggtatggacaaaggcacaacaag
gacagcaaagaaaagaacggtgatgattgcctgcaagcgctgagttatgaggagactgtc
tccggggtagcgcctgctcgaggtcctacaccggaggaccaccagcaggcgcaggctatg
gaaaatagaccgatggtcggcccagtcccagatagaggtccagtagcgtccaagcagatt
tctgggccgacgaacggatccgtcatttcggatctcgctgcatggggatcgaagttctcg
gcgcctactaatcacgcggagcagaagtcagcaaagaagaggagcatttgggggttccga
caacgctcttcttcggacctcactaaccaacctcaggctgcgcagcctcaacaaacctat
gagaggatacctgtttctcgaagtgtctttggagctccgttagaagaggcggttcatttg
agcaagccgatgggagtggacgttcatctacccgcagtcgtttacaggtgtattcaatat
ttggatgccaaggatgcggcgagcgaggagggtatctttcgattgagcggttcgaatgtc
gttatcaaaggtcttcgagaacgttttaacactgaatcggactacaatcttctggataat
gacgagtactatgacgttcacgccgtggccggtttgttgaagttgtatcttagagaactg
ccgacaaatgttctaacgacggagcgaagggaggacttcgtcaaagtcacggaaatggac
gacaaggcagctaaaatcgcggccctgaacgagttggttcatacgctgcctgttgagaac
ttcgaactcttgagggcgttgtcgggacacttgatccacattgttgagaactcggatata
aacaagatgactataagaaatgttggaattgttttctccccaaccctcaacataccagcc
caagttttcagtatgttcctccatgaatacaaccacatctttgttcgcccagaagaaggc
aaccttgaagccctccgtagccaccatccaaaacacccccaccaaaaccccccgtccacc
ccatctcccgtctccccacgtagcccataccccacacccaccgaccgccgcccatcgacg
actggatcactcctccacccgagcaaccccaacgccgcccccttaaccccagcaatgcac
tccccattaccaccatcacgcccggcaccccaagaaccgccaatcaccccgagaccacaa
ttcgctagttacgagccggcgtacgggaccgttgttacccctaccccaacgaagcaaccg
gcgatggggtttccggcgccaccaccgatgcttggtgatggcctaggggacaatggacct
agtggggctaaggctaggaggagagagagtagtatgatgttcatgatgggtaggaagggg
tataatcgtggggtgaacaatggcgggagcgcaatggtgatggaagatagtgtctatgag
tga
DBGET
integrated database retrieval system
