Tuber melanosporum: GSTUM_00004233001
Help
Entry
GSTUM_00004233001 CDS
T01282
Name
(RefSeq) hypothetical protein
KO
K12572
PAB-dependent poly(A)-specific ribonuclease subunit 3
Organism
tml
Tuber melanosporum
Pathway
tml03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tml00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
GSTUM_00004233001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tml03019
]
GSTUM_00004233001
Messenger RNA biogenesis [BR:
tml03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
GSTUM_00004233001
mRNA degradation factors
3'-5' decay
Pan complex
GSTUM_00004233001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pan3_PK
Pkinase
Motif
Other DBs
NCBI-GeneID:
9188106
NCBI-ProteinID:
XP_002835530
INRA:
GSTUM_00004233001
UniProt:
D5G594
LinkDB
All DBs
AA seq
522 aa
AA seq
DB search
MAPAIDPQLYHHQGLQHGFENMGLGENTTANAAMNAYDFTVGASVNPYAQTGVDMFYQPQ
QTYQHPLNYHLYAPLAPYPQKLQPFQKNIHGFFLPDNLREELQKKADATLQTLPAISSIL
PPSIEEYHQLVPLDISNQKSAQVFGYPSWAYKAFSSEDGNAYALRRLEGFRLSNEADIRI
VQRWRKVLSANIVTIHDAWTTTKFGDSSIVFVYDYHPLSKTLAETHFGPNPRYPNPTRQH
QPTGPIVPEQVLWSYIVQIASALRVIHSAGLAARVIEPSKILLTNKMRIRLNCCGIFDVI
HPETTRSQESVRECQQEDLIQLGRLMLSIAFNTPSAIQYPQKSMEYIGRHYSIQLRDSIY
YLYTGSTKNIDEYVKSIANQAFQNFDSALHYEDSLESALSRELENGRLVRLLCKFGFINE
RPEYDHDPRWSETGDRYYLKLFRDYVFHSVDESNNPVVDMAHVLTCLNKLDAGVDEKIML
VSRDSMNCFVVTYKEARPQQVQTMKFDLLLATYLRSFMVPSC
NT seq
1569 nt
NT seq
+upstream
nt +downstream
nt
atggctccggcaatcgatccacagctttatcatcaccagggcctccaacatggatttgaa
aatatggggttgggcgagaatactactgcaaatgcggcgatgaatgcgtatgattttact
gttggggcgtctgtgaatccatatgctcaaacgggtgtcgacatgttttatcaaccgcaa
caaacgtaccaacatccactcaactatcatttatatgctcccttggccccgtaccctcag
aagctgcagccgtttcagaaaaatattcatgggtttttcttgcccgataacctaagagaa
gagctccagaaaaaggccgatgctacactccaaacactaccagctatatcttcaatactc
cccccgtcaatcgaggaatatcaccagcttgttccacttgacatttccaaccagaagagt
gcgcaagtttttgggtatcccagctgggcctataaagcattttcgtctgaggatgggaac
gcctatgcgctgcggagacttgaaggcttcaggctctcaaatgaggctgatatccgaatt
gttcagagatggagaaaggtattaagcgctaatattgtgactatacacgatgcttggacg
actaccaaatttggggatagctctatcgtcttcgtctatgattaccacccattgtcgaaa
acactggctgagactcactttggacctaacccaagatacccgaatcctacgaggcagcat
caacccacaggcccaatagttccagaacaagttctctggagctatattgtccagatcgct
tctgcattgagagtcatacatagtgcaggattagcagcccgagtgattgaaccgtcgaaa
atcctactcacaaataaaatgaggatacgtctcaactgctgtgggattttcgacgtcatc
catccggagactacacgcagccaggagtcggttcgggagtgtcaacaagaagaccttatc
cagttaggtcgtctcatgctctcaatcgcatttaataccccttcagctattcaatatccc
cagaagagcatggaatacattggtcgtcattactccattcaacttcgggacagcatttac
tacctttataccggatcaacgaaaaatatagacgaatacgtcaaatccatagccaaccaa
gccttccaaaatttcgatagtgctctacactacgaagattcactagagtcggcgctctct
cgagaattagagaacggtaggctagtgcggcttttgtgtaaattcggcttcatcaacgag
cgacccgagtacgatcatgatccaagatggagtgagaccggtgacagatattacttaaag
ctctttagggactacgtgttccattctgtcgacgagagcaataatcctgtcgttgatatg
gcccatgttcttacctgtttgaataaactggacgctggggtagacgagaagatcatgttg
gtcagtagagacagcatgaattgttttgtagtcacctataaggaggcaagacctcagcaa
gtccagacgatgaaatttgatttgttattagcaacgtatcttagatccttcatggttcct
agctgttag
DBGET
integrated database retrieval system
