Tuber melanosporum: GSTUM_00004263001
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Entry
GSTUM_00004263001 CDS
T01282
Name
(RefSeq) hypothetical protein
KO
K15449
tRNA wybutosine-synthesizing protein 1 [EC:
4.1.3.44
]
Organism
tml
Tuber melanosporum
Brite
KEGG Orthology (KO) [BR:
tml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tml03016
]
GSTUM_00004263001
Enzymes [BR:
tml01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.3 Oxo-acid-lyases
4.1.3.44 tRNA 4-demethylwyosine synthase (AdoMet-dependent)
GSTUM_00004263001
Transfer RNA biogenesis [BR:
tml03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
GSTUM_00004263001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Wyosine_form
Radical_SAM
Motif
Other DBs
NCBI-GeneID:
9188131
NCBI-ProteinID:
XP_002835555
INRA:
GSTUM_00004263001
UniProt:
D5G5B9
LinkDB
All DBs
AA seq
482 aa
AA seq
DB search
MGKLTGGNGGTRRMFPVGMGDVNPAVGLNSAEKSLDEWRVHLEDAMREYAATGALGDSAD
WRTAIESGDEDSDFEITDPADDMAGEGQNADRKEMVPNGSVTYEALTKQGYTIVGSHSGV
KICRWTKSALRGRGSCYKFSFYGIKSHLCMETTPSLSCSNKCVFCWRHGTNPVGTTWRWK
VDPPEEIFKGVVEGHYRKIKMMKGVPGVRADRFSEAFKIRHCALSLVGEPIFYPYINEFL
HLLHSSKISSFLVCNAQHPAQLAALGHTTQLYVSIDASNKDSLKKIDRPLHRDFWERFQQ
CLDILREKRNQHRTVFRLTLVKGFNIEDEVQGYADLVEKGLPCFVEVKGVTYCGTSTAGE
AGLTMKNVPFYEEVVTFVEALNAELARRGLGYGIAAEHSHSCCALIASNRFFINGKWHTL
IDYAKFFELLESGREFGPEDYIGEATPEWANWGNGGFDPADQRVYRKGKGPKEEVEESGG
CG
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atggggaaattgacaggaggaaatggaggaacaaggagaatgttccctgttggcatggga
gatgtaaacccggctgtgggacttaatagtgcggagaaaagtttggacgaatggagagtc
cacctagaagatgctatgcgagaatatgctgcgactggggctctgggtgattccgctgat
tggcgaacggcaattgagtctggagacgaagattccgatttcgagattaccgaccctgca
gatgatatggccggagaagggcagaacgcggaccgtaaagagatggtaccaaacgggagt
gttacatatgaagcattgaccaaacaaggctacaccattgttggttcccactcgggggtg
aagatctgtcgatggactaaatcggccctgagaggacgaggaagttgttataaattttct
ttctatggaatcaagtcacatctttgcatggaaactacaccatccttatcatgttcaaac
aaatgtgtattctgctggcgacacgggacgaatcctgttgggactacctggagatggaaa
gtagatccaccagaggagattttcaagggtgtcgttgagggccattaccgcaaaatcaaa
atgatgaaaggagttccgggggtccgggcagataggttcagcgaggccttcaaaatcagg
cattgtgcattgagtctagtcggcgagcctatcttctacccatatatcaatgaattcctc
cacctcctccactccagtaaaatatcatccttcctcgtgtgcaatgcccagcacccggcc
cagcttgcagcacttggccacacaacccagctttatgtctcgatagacgcttccaacaaa
gatagtctaaagaaaatcgaccgtccgctccaccgtgacttctgggagcggtttcaacag
tgtctcgacatcctccgtgagaagcgcaaccaacataggacggtcttcagactaacccta
gtaaagggcttcaacatcgaagacgaagtgcaaggctatgcagacttagtggaaaaggga
ctcccctgctttgtcgaagtcaaaggagtgacgtactgtggaacatcgacagctggagaa
gcaggcctaactatgaagaacgtacccttttacgaggaagtcgtaactttcgtcgaagcg
cttaacgcagaacttgccaggcgtgggctggggtatggtatcgccgccgagcattctcac
agctgttgcgccctgatcgcctcaaaccgcttctttatcaacgggaaatggcacacacta
attgactacgccaagttctttgagctgcttgagagtgggagggagtttggcccagaggat
tatattggagaggctactccggagtgggccaattgggggaatgggggatttgatccggcg
gatcagagggtttataggaaagggaaggggcccaaggaggaggttgaggaaagtggcggg
tgtgggtag
DBGET
integrated database retrieval system
