Tuber melanosporum: GSTUM_00004283001
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Entry
GSTUM_00004283001 CDS
T01282
Name
(RefSeq) hypothetical protein
KO
K18715
nucleoporin NUP159
Organism
tml
Tuber melanosporum
Brite
KEGG Orthology (KO) [BR:
tml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tml03019
]
GSTUM_00004283001
Messenger RNA biogenesis [BR:
tml03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
GSTUM_00004283001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_NUP159_NUP214
Motif
Other DBs
NCBI-GeneID:
9188148
NCBI-ProteinID:
XP_002835572
INRA:
GSTUM_00004283001
UniProt:
D5G5D6
LinkDB
All DBs
AA seq
1514 aa
AA seq
DB search
MVNIDTRGFEKSSSGDVVLKKEASTVSWSPLGKQIVCGMGDGTGWQMTPGGEVKAVLPSV
PGLENYFISSIVWVGNATFITTHTPVPSDDANNESVFHALVRDGTSYQYTKLPDPIPPFG
MDSRTPPYFFHAMIRQYAPGMRDMIMFTNTCSSDVGLVCRFSTALTGDPSVPADNWITAG
IGDDHRRAQIPLGGESFSDTSPIGMALDLSNKANVKRPVGGEEIEESPGPLPILMVLNHE
GLLSAWNVIYNDAIEQNEKYNGMMVYVTQEGPSQSAPQTPQQPASQRQSVQNITPSPAFG
VNSFGQSPVSNGNGTFGQPSSLGSPNTFAKPATGAFGQSAASPTFGQPSSIGASGASAFG
KPSALGGSMWGSTSGASPSAPAPTSATAFGQPSALGTRSVFGQPATLGGQPAFGRTAALG
VQPVFGQPAPLGSATTAPAFGAPTLIGANKPGTAGFSAVSSLGSPPAGGSPFGSTSAFGG
GSAFGAYANKGGFSAAAAAAGSGDSKPIWGTGKSLGSDTTSTMFGGGDNVPSPFTSGSTG
SFKLSSAFKPDPESAPENKPFPPSGGFGSLGVGLGDALTSTPSAISRPGPLPTPGGVSDQ
NIRDASMDDSDEQPDEPSDDDDIISPEATEARQAGFPSTPAKPGLPHGIFSSTKAAGSSS
SASNPFTSANQSSSPFSSVPGPSSGSPFGAWGAQRKTPFGVPSTPPKSPFPTTPKLSSPF
PGPSRPLTFAQSPEKSPESAQAAVAAPVTSSPPPPSLPPHSPFTSEEKGLETLPALPADE
SSTPALTEEASSIPLPSGPESVKESSGTQASESPSLPSPGPKSVGTDNEQVTSLDGSDDD
NDGHQESKGEGDEGKRDNGDEDEDEDGDDEDGDDEDGGDEDGDDEDEDDEDEGNSEGDDS
PLSEGFVFEPKPKLPSASSGPSTSDVFGTDTTFSGTFIKGGIEENALFSPLAKTPLPVND
SDSDRSRNSLLASPNLKNRSPGAAVGSLANKNKGGKNSLGRRGVSNRPPKKPDASKILST
LCPSDFLASRNKPQGTFPFQPSADDSINKPAGSSPLAAPALQAKQASQEEGEKEVQEEER
VQEEGEEEFRGEREAQGEEKVQEEGDEGPQKEKKAQEEEGAQEEGVQKEKKAQEEERVQE
EGEEEVQEEKKAQEEEEVESDLDFDNEYDDYDPDRVRNKLLNSDVKPVQELPKFRRNGEV
EVASDFNAVFDSIYLSGNMMINRLGLTVQGLKAYHLGQENPLPDVEHKTAKEMRHPLDWR
FCEMDQVKEILEQLLASVKGENQGNDELEARYQAASKGFIKLDVKDAEIKRLLAVHNDAQ
AAAIARARPLTPEQVLQQRKLRKEYAKVERLLKEAEKEVTQLKAKIASRDRDRPGAVVPP
TVEAVKNTIMKLTGMVERKNGDIDYLEERLRRVKIKSRSASATPGKSRGLTPNQTPRGET
PQRFETPEKLRSYDNNTSSVSYPASPVLALADPLDVEEAREEIRARKEMGRKMRDALEIC
GPKLTTVSRWSGEN
NT seq
4545 nt
NT seq
+upstream
nt +downstream
nt
atggtcaacatagacacaaggggttttgagaagagctcaagtggagatgtcgtattgaag
aaagaagcctcaacggtgtcatggagtccactgggaaaacagattgtttgcgggatggga
gacggaactgggtggcagatgacccctgggggggaagtaaaagctgttttaccgtcggtt
ccaggcctggagaattactttatatcgtcaattgtttgggttgggaatgctacatttatc
actacgcataccccggtcccatctgatgatgcgaataacgaatctgtttttcatgcgttg
gtgcgagatggtacatcatatcagtacacgaaacttcctgatcctattccgccgtttggg
atggactcccgaactccaccctactttttccacgccatgattcggcaatatgctccaggc
atgagagatatgatcatgtttaccaatacttgctcatcagacgtcggccttgtttgccgg
ttttctactgcattgactggagatccttcagtgccagcggataactggatcaccgccggc
atcggcgatgatcatcggagagcccaaatacctttgggcggtgaaagcttttctgatacc
tcgccaatcggaatggctctggatttgagcaataaggcaaacgtgaaacgccccgttggt
ggagaggaaattgaggaatcgccgggaccgttaccaattcttatggtgctcaatcacgaa
ggattgctgagtgcttggaatgttatttacaacgatgctattgaacagaacgaaaagtat
aatggaatgatggtttacgtaacgcaggaaggaccctcacaatcggcaccgcaaacgcca
cagcagccagcatctcagaggcagtcagttcagaatataacgcctagtcccgcctttggg
gtgaactcttttggacagtcaccagtttctaatggcaatggcacatttggccagccctca
agcctaggaagcccgaatacattcgcaaagcccgcgactggcgcttttggacagtctgcg
gcgtcaccaacattcggccaaccctctagtattggtgcgagtggggcaagcgcgtttgga
aaaccttctgctcttggaggatctatgtggggttccacctcaggagcttctcctagcgca
cctgctccaacttcggcaaccgcttttggtcaaccatcggcccttggaacaagatctgta
tttggtcaacctgcaactcttgggggtcaacctgcttttggccggaccgctgcccttggt
gtccagcctgtgtttggccaacctgcgccattgggatcagctactactgctccagcattc
ggggcacctactcttataggggcaaataagcccggaactgctggattcagtgctgtttcc
tcccttggaagcccccctgctggaggaagcccgtttggaagtacttctgcttttggaggt
ggaagtgcatttggtgcgtacgcgaataaggggggattctcagcagcagcggcagcggca
ggtagcggagatagtaaacctatctggggcacaggtaagagcctaggctctgacaccacg
tccacaatgttcgggggcggtgataatgtacctagtccatttacttccgggagcaccggt
tccttcaagctatccagtgcgttcaagccagaccctgaatccgcccctgagaataaacca
ttccctccaagcggtggttttggtagccttggagtggggctaggggatgctcttacttct
acaccgtctgccatttctcgccccggaccactgcctactccggggggagtatctgatcag
aatatcagagatgcaagcatggacgatagcgacgagcaaccagatgaaccaagtgacgat
gatgacataatttctcctgaagcaacagaagctcgacaagccgggttcccttcaacaccc
gcgaagccaggccttccccatggtatcttctcgagcacgaaagcggcaggctccagttca
tctgcgagcaacccgtttacgtcagcgaatcaaagttcatcacccttcagctctgtacct
ggcccttcttcgggatcaccttttggtgcttggggggcgcaacgcaagacaccctttggc
gttccaagcactccgccaaagtccccctttcccactacaccaaaactttcgagcccgttt
cctggtccgagtagacctttgacctttgctcagtcacccgaaaaaagtcccgaatccgcc
caagcggcagtggcagcgccggtaactagctcgccccctccgccatcgcttccacctcac
tcaccatttacttccgaggagaagggtctcgagacacttccagcattgccagcagacgag
tcctctacacccgcattaactgaggaagcatcgtcgataccgttaccctcaggtcctgaa
tccgtgaaggaatcaagcggcactcaggctagtgagtcgcctagcttgccttccccgggg
cccaagagtgtgggaacggataatgaacaagttacctcgctagacggaagcgatgatgac
aatgatggacaccaagagagtaagggagagggtgatgaaggcaagagagacaatggagac
gaagatgaggacgaagatggagatgacgaagatggagatgacgaagacggaggtgacgaa
gatggagatgacgaagatgaagatgacgaagatgagggtaacagcgaaggggatgacagc
ccactatccgaggggtttgtatttgaacctaagccaaagttgccctccgcatcgagtggt
ccaagcacatctgatgtttttggaaccgatacaacctttagtgggacgtttattaaggga
ggtattgaagaaaacgcgctattcagtcctttggctaaaacccccctcccagtcaatgat
agtgacagtgatcgatcgagaaattcgttattagccagcccaaatctaaaaaatcgttct
cctggcgccgctgttggctccctagcgaacaaaaataagggggggaagaacagtctaggt
cgacggggcgtgtccaacaggccgcctaagaaacctgacgcttctaaaatacttagtact
ctttgtccgtctgattttctcgcatctagaaataagcctcaagggacttttcccttccaa
ccctcggcggacgactccataaacaaaccagccgggagcagcccgttagctgctccggcg
ttgcaggcgaaacaggctagccaagaggaaggagagaaggaagtccaagaggaggagaga
gtccaagaggaaggagaggaggaattccgaggggagagggaagcccaaggggaggagaaa
gtccaagaggaaggagatgagggaccccaaaaggagaagaaagcccaagaggaggaggga
gcccaggaggagggagtccaaaaagagaagaaagcccaagaggaggagagagtccaagag
gaaggagaggaggaagtccaagaagagaagaaagcccaagaggaggaggaagtggaaagt
gatctggattttgataacgaatacgacgactacgatccggaccgggtacggaataagttg
ttgaatagtgacgtgaagcctgtccaggagttgccgaaattcaggcgcaatggggaggtt
gaggtcgcaagtgatttcaatgcagtgttcgattccatttaccttagcggcaacatgatg
attaataggcttggcctaactgttcaagggctcaaagcctaccatcttggccaagagaac
ccactcccggatgtggagcataagacggcaaaggaaatgaggcatccactagactggagg
ttttgcgaaatggaccaagtcaaagagatactcgagcagttacttgcaagtgtgaagggc
gaaaaccagggaaacgatgaattggaagcgaggtatcaagcagcgagtaaagggttcatt
aaacttgatgttaaggatgcggaaattaaacggctccttgctgttcacaacgatgctcag
gccgccgcgattgctcgcgctaggccacttacgccagaacaagttctacaacaacggaag
ctcaggaaggagtatgcaaaagtggaaaggctccttaaggaggccgaaaaggaagtaacg
cagctcaaggccaaaatcgcatcccgagacagggacaggcctggggccgtggttccaccg
actgtggaagcggtcaagaatacaatcatgaaattgacagggatggtcgaaagaaagaat
ggagatatcgattacctcgaagagcgtttgagacgagtcaaaatcaaatctcgaagcgct
tctgccactccgggcaagtctagaggtttaaccccgaaccagacccctagaggagaaaca
ccgcaaagatttgagactccagagaaattgagatcatacgataataatacttcaagtgtt
agttacccggcgagcccagtgttggccctagcagatcccttggatgttgaggaggctagg
gaggaaattagagcaaggaaggagatggggaggaaaatgagggacgctctggagatatgt
ggacctaaattgacgacggtgtcaagatggagcggtgaaaattaa
DBGET
integrated database retrieval system
