Tuber melanosporum: GSTUM_00004321001
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Entry
GSTUM_00004321001 CDS
T01282
Name
(RefSeq) hypothetical protein
KO
K10865
double-strand break repair protein MRE11
Organism
tml
Tuber melanosporum
Pathway
tml03440
Homologous recombination
tml03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
tml00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
GSTUM_00004321001
03450 Non-homologous end-joining
GSTUM_00004321001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tml03032
]
GSTUM_00004321001
03400 DNA repair and recombination proteins [BR:
tml03400
]
GSTUM_00004321001
DNA replication proteins [BR:
tml03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
GSTUM_00004321001
DNA repair and recombination proteins [BR:
tml03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
GSTUM_00004321001
BRCA1-C complex
GSTUM_00004321001
NHEJ (non-homologous end-joining)
MRX complex
GSTUM_00004321001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Mre11_DNA_bind
Metallophos
DUF445
NYD-SP28_assoc
AAA_PrkA
Motif
Other DBs
NCBI-GeneID:
9183741
NCBI-ProteinID:
XP_002835598
INRA:
GSTUM_00004321001
UniProt:
D5G5G2
LinkDB
All DBs
AA seq
769 aa
AA seq
DB search
MPPRSNANTLRILIATDSHVGYNERDPIRGDDSWKTFDEVMSLAKDRDVDMVLLSGDLFH
DNKPSRKAMYQVMKSLRANCYGEKPCEIEILSDTSQTFQSAGGHVNYEDPDINVAIPVFS
IHGNHDDPSGEGRLCALDLLSVAGLLNYFGRTPENDNITVTPVLLQKGSTKLALYGLSNV
RDERLFRTFRDGKVKFLRPDVQQKEWFNLMCVHQNHHGHTETGYLPENFLQEFLDMVIWG
HEHECLIEPKFNPEMGFHVIQPGSSIATSLCEGEAVTKHVGILSITGRGFELEKIRLKTV
RPFVMKEIVLAEEPQMKNVWKKNTNRTAVTSFLCNTVEDLIEEAVTEWLNAQEDPEVERK
DAPLPLIRLRVEYSAPEGGRFETENPQRFSNRFVGKVANVNDVIQFYRKKSAARRKVGGM
LEDSGSHVQDSLLEEYGGSIDNVKVEKLVQEFLTNATLEILPSNGLGDAVGQFVDKDDKH
AVEMFVEDSLKSYLTKLREIDDLNEETISEAVEQQKSYLEQLFAKGLVKPKRTRKKLKPK
PDHWYSDLDGHWSDQPAALVRSGSDNDGDQNDDDGDDSAAPTRKTAARGGRGRGRGSAAA
STRGRKAAPAAKGRGRKQVVEDDDDDDVEMIEDDEDEPSIPPPKTTYYPITPFPLIKYIV
LTFSSRGRKTTAAPPARKPAAKPAAAPRRPAGATRAANQQASQASTARTRQAKLNFGATQ
NTQARESQASNSLFHRAIHPPSDDEDIDDDEDDDFEPLPSQRTTRSSRR
NT seq
2310 nt
NT seq
+upstream
nt +downstream
nt
atgcctcctcgatccaatgccaataccctccgaatcctaatagcaaccgattcccacgtc
ggctacaacgaacgagaccccatccgcggcgacgactcatggaaaacattcgatgaagtg
atgtccctggcgaaagatcgggatgtcgatatggtgctgctgtctggggaccttttccat
gacaataagccttccagaaaagccatgtaccaggtcatgaagagtttgcgagcgaactgc
tacggtgagaaaccttgcgagattgagattctgtcggataccagtcagacgtttcagagc
gcggggggtcacgtcaattatgaggatccggatattaatgtcgctattccggtattctcg
attcatggtaatcatgatgacccgagcggggaggggaggttatgtgctctagacctatta
tcggtggcgggtttgttgaactattttgggcggactccggagaacgataatattaccgtt
accccggtgctgctacagaagggatctactaagctggctttatacgggctgtcgaatgtt
agggatgagaggttgttccggacgttcagggacggcaaagttaagttcctgcggccagat
gtgcagcagaaggagtggttcaatctgatgtgtgttcatcaaaatcatcatggacatacg
gagactggatatctaccggaaaacttcctccaggagttcttagatatggttatttggggg
cacgagcacgaatgtttaatcgagccaaagttcaatccagaaatgggcttccatgtcatt
caacccggatcttcgatagccacatccttgtgcgaaggcgaggctgttacgaagcatgtt
ggcatactctcgatcacaggtcgtggctttgaattagagaagataagactcaagactgtg
cggccgtttgtaatgaaagagattgttcttgcggaggaaccccagatgaagaacgtatgg
aaaaaaaacacgaataggactgcggttactagttttctttgcaatacagtcgaagacctg
atagaggaggctgttactgagtggctcaatgctcaggaagaccctgaagtcgagagaaag
gatgctccattgccgctaatccggcttagggtggaatattcggcacccgagggtggtcgc
ttcgaaaccgaaaacccgcagagattctccaatcgtttcgttggaaaggtcgcgaacgtg
aatgatgtgattcagttttatcgaaagaagtccgcagctcggaggaaggttgggggcatg
cttgaagatagtgggtcgcacgtccaagactccttacttgaagagtacggcggatctata
gataatgtcaaggtagagaaattggttcaagaatttctgaccaatgctacattagagata
ttaccgagtaatggacttggtgatgcggttggacaattcgttgataaggatgacaaacat
gctgtggagatgtttgtcgaggacagcttaaaaagctacttgacgaaattgagggagatt
gacgatttaaatgaggagactatctcggaggctgtagagcaacagaagagttatcttgag
cagctctttgccaaggggcttgttaagccgaagaggacaaggaagaaactaaaaccaaag
cctgaccattggtattcagatcttgatggccattggtcggatcagccggcagcgctggtt
cggtccggaagtgataatgatggagaccagaacgacgatgacggcgatgactcggcagcc
cccactcggaaaacggcagctagaggtgggaggggtcgagggagaggaagtgcagcggcc
tcaactcggggtagaaaggctgccccagccgcaaaaggccgtggcaggaagcaagttgtt
gaagatgatgacgatgatgatgtcgaaatgattgaggatgacgaggacgaaccgagcatt
cctccaccaaaaacaacgtattatcctattaccccattccctctcattaaatatattgtt
ctgacgttcagtagtcgaggcaggaaaaccaccgccgccccaccagcacgtaaacctgcg
gcaaagccagctgctgctcctcggcgaccagcgggtgccacacgcgcagccaatcagcaa
gcttcgcaagccagtacagccaggacgaggcaggcaaagctgaactttggtgctacacag
aatacccaggcgcgtgaaagtcaggcaagtaactccttatttcacagggctatacaccct
cccagtgatgacgaggacatcgatgacgatgaggatgatgattttgagccgttacctagc
cagaggactactaggtccagcaggcggtag
DBGET
integrated database retrieval system
