Tuber melanosporum: GSTUM_00004357001
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Entry
GSTUM_00004357001 CDS
T01282
Name
(RefSeq) hypothetical protein
KO
K08492
syntaxin 18
Organism
tml
Tuber melanosporum
Pathway
tml04130
SNARE interactions in vesicular transport
tml04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
tml00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
GSTUM_00004357001
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
GSTUM_00004357001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tml04131
]
GSTUM_00004357001
Membrane trafficking [BR:
tml04131
]
SNARE
Syntaxin (Qa)
Stx-rER
GSTUM_00004357001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Syntaxin-18_N
SNARE
BLOC1_2
Motif
Other DBs
NCBI-GeneID:
9183767
NCBI-ProteinID:
XP_002835624
INRA:
GSTUM_00004357001
UniProt:
D5G5I8
LinkDB
All DBs
AA seq
352 aa
AA seq
DB search
MTNVTPIFNEFLSTHPAVAVIPPDRKPPPPKDEFLKEALRIESHISSLAKYLLSIRRAYL
STTSGRPNPSRVTTSSSASLLARNNRSTSLTDAQRDAIDAETKGVIQELLTVISRLESTE
KVRAQTEEALLRKRYSSGLRGIFRDETEEREMEEDKLRTLSVHREGVLWLLKTGLEKASE
LQRGQQEIRLQRQVERGKSILCKAPPGFPPPNHTSLPVTSSSRSVAPTGRSVWLEDEERK
NIENILTEEQLQLFEKENGDLMKHYEDTLDQVKSAEKSLIEISSLQTQLATNLATQNAHI
DNLVVDSMSTTENIQRGNKELKKAGENISIARSAFWGTVAFSGVVFIWDLFI
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
atgacgaatgtgactccaatattcaacgaatttctttccacccatccagcagtcgctgtg
atccctccagaccgaaagccccctccacccaaagatgagtttctcaaggaggcactccga
atcgaatcgcacatatcatccttagcgaaatatcttctctctatccgacgggcgtacctc
tctacaacctccggtcggccgaatccttctcgagtgaccacctccagctccgcttcatta
ctcgctcgtaacaatcggtcaacatcgcttacagatgcacaacgtgacgccatcgatgcg
gagacgaagggcgttattcaggaactcttgactgtcatatcccgactagaaagcactgag
aaggtcagggcgcagacggaagaagccctgctccggaaacgctactcttcagggttgcgc
ggtatctttcgtgacgagacggaggagcgagaaatggaggaggataaacttaggacgctg
agcgttcacagagaaggggtgctgtggttactaaaaacaggattggaaaaagccagtgaa
ttgcagagagggcagcaggaaattcggcttcagcgacaggtcgaaagagggaagagcatc
ttgtgcaaggctccgcccggctttccgccaccgaaccatacaagtttgccagtgaccagc
tcttctaggtccgtagccccaacggggagaagtgtctggttagaagacgaagaacggaag
aatatagagaatattcttacggaagagcaacttcaactctttgagaaggagaacggagac
ttgatgaagcattatgaagacactctggatcaagtcaagtccgcagagaaatctctcatc
gaaatttcctctctacaaactcagctagcgacaaacctggccacccagaatgcacatata
gacaacctcgttgttgattcaatgtcgaccaccgagaacatccaaaggggaaacaaagag
ctgaagaaggcaggagaaaatatctcgatagctaggtcagcgttctggggtactgtagcg
ttttccggagttgttttcatttgggatttgttcatataa
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integrated database retrieval system