KEGG   Tuber melanosporum: GSTUM_00004371001
Entry
GSTUM_00004371001 CDS       T01282                                 
Name
(RefSeq) hypothetical protein
  KO
K10610  DNA damage-binding protein 1
Organism
tml  Tuber melanosporum
Pathway
tml03420  Nucleotide excision repair
tml04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:tml00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    GSTUM_00004371001
  09124 Replication and repair
   03420 Nucleotide excision repair
    GSTUM_00004371001
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:tml04121]
    GSTUM_00004371001
   03400 DNA repair and recombination proteins [BR:tml03400]
    GSTUM_00004371001
Ubiquitin system [BR:tml04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Adoptor protein
     GSTUM_00004371001
DNA repair and recombination proteins [BR:tml03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      GSTUM_00004371001
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      GSTUM_00004371001
SSDB
Motif
Pfam: Beta-prop_RSE1_2nd Beta-prop_RSE1_1st CPSF_A Beta-prop_EML DUF6535
Other DBs
NCBI-GeneID: 9183777
NCBI-ProteinID: XP_002835634
INRA: GSTUM_00004371001
UniProt: D5G5J8
LinkDB
AA seq 1053 aa
MSYLATIYEASSVRIAIKAEFLTVGETSLIVAKTSHIEVYKLDGPGIVLEDKFPIYGRVI
ALAAFRPVKSATDHLLIVIGKVNYQYFTISWDPVAKKPKTEHMAVNFSEYNAPLSDSFQC
LADPGKNMLGIHVYKGIFLVIPQIQQSIKGSRRSRADLDVGNIGNPCVVRLKELEILDLK
FLFGTISPVLAVLYKPSGADEMAVNTYELSVKSGEVKLLDWRIRDLKGGREALFLIPVRP
PSNGLLLIGVTKIQYFDNYGNKTFLPVDPPMVWVTWEMLSPERYILGDEAGGLHMLTLSA
GLMDTKVGLHLKLVGNASIPEILVHLNQGLLFLGSHSGDSQLLQLYQNGIKPMVRVQQVL
RNIGPIVDFRVMDLDYSRSDEVMRQYSPGHIRFLSASGGHTQGHLRTIRSGVGLYDLGFL
GEMSGIRGLWSLRSIPGSSFDDVLVVSFIEETRIFKFDNSGEIEELYEFMGFALNQRTIL
AHSVVGGRFLQVTATAVKLVDVRSNTLIAESYPDKSLTITIASANQDLLIYAMGPTLVLL
NLARDLEEHIRTTFENEISCLNMPSSPSTICAVGFWTVSLVLILSVQSFSILSQEILSQE
DSAATPRSLLFARLLENGPPTLLVALGDGSMFTFALNETTCGLSERKHIILGAQPIRFQS
IPGGNGGVTVFATCDHPSVIYGSDGRIVYASVTADKPTYVTSFNSPSFPDAVVIASEDDL
KLSVVDPVRTMHVQSLPVGDVVRRIAYSKEKNIIAIVTVSKVPDTRTGDYLYSSCIRLVD
NTAFSVVDSYELNQLELVESLASGKICGGNGLLSEGFLAGTVYPGGGRDESEKGRIIVFN
ASETKRIKLIVSYDTPGSVNGIQIVGEGKFVAAIGREIHLYSLKYTDIQSKTAASESVGA
TGCTITKLASFKAHSTPLDVAVYNDIIAVCDFMHGPSILQHIEDKENKSSEFVEVARAPK
PSWLTALELLDEKTVFCADTDGNLVVWQRQLSGVTEDDRKQLQQIASMKIGEDIDRIRRI
CNQTLAGSRVQPKAHLSTVDGAILLYGRHSKLP
NT seq 3162 nt   +upstreamnt  +downstreamnt
atgtcttacctcgcaactatttacgaggccagcagtgtccggattgctataaaagcggaa
ttcttaactgtgggggaaacatctctcattgtcgctaaaacatcacatatcgaggtttac
aaacttgatggacctggcatcgttctcgaagataagtttcctatttacgggagagtgata
gctcttgcagctttcaggccagtgaagtccgcgacagatcaccttttgattgtgattggt
aaagtcaattaccaatatttcacgatatcatgggatcctgttgccaaaaaacccaaaacc
gaacatatggctgtgaatttctccgaatacaatgcaccattatcggattctttccagtgt
ttggccgaccctgggaaaaatatgttagggattcacgtttataaaggaattttcctggtt
attccgcagattcagcagtcgattaaaggttctagaaggtcgcgcgcggatttagatgta
ggcaacatcgggaacccgtgtgttgtgaggctcaaggagctggaaatccttgatttgaaa
tttctgtttggtactatttcgcctgtactagctgtactttataagccttccggagccgat
gagatggcggttaatacatatgaactatctgtaaagtccggtgaggttaagctcttggac
tggcggattcgggatttgaaggggggacgggaggctctattcctcatacctgttcggcca
ccttcgaacggattattgctcattggggtaaccaagatccaatatttcgacaattatgga
aataaaaccttcctgcctgtcgacccgcctatggtatgggttacttgggagatgttaagt
ccggagagatatattttaggagacgaagctggcgggcttcatatgttgacattatcagct
ggtttgatggacacgaaagtcggtcttcacttaaagctggttggaaatgcgtctattcca
gaaatattagtccacttaaatcaagggcttttgtttttaggctcacactccggcgattca
cagctcctccaactgtatcagaatgggattaagccgatggttcgagtccagcaagttctt
cgcaacataggcccaatagtagacttcagagttatggatttagactattcaaggtctgat
gaggtaatgcggcaatattcgcctggtcatattagatttttatcagcgagtggcgggcac
acgcagggccatctaaggaccataagaagtggagttggcctatatgatttaggctttctt
ggagagatgagtggaatccggggcctatggagcttacggtcaattcctggtagcagcttt
gatgatgtgctggttgtctcctttattgaggaaactagaatatttaagttcgacaattct
ggagaaattgaggaattgtacgagttcatgggatttgcgcttaaccaaagaactattctc
gcccatagtgttgttggcggccggttcttgcaagttaccgctactgcagttaagctcgtg
gatgtccgtagtaacactcttatcgcagagagttatccagacaagagcttaactataacc
atagcaagtgccaatcaagacttgctaatatatgcgatgggtcctaccttggttcttttg
aatcttgcgcgagatttggaggagcatatcagaaccaccttcgagaacgaaataagttgc
ctcaacatgcctagttccccatccacaatctgcgcagttggcttctggactgtgtcactg
gtcctaattcttagcgtacaatcgttctccattttatctcaggagatattgtctcaagag
gacagtgccgctactccccgttcattactttttgcgagacttttagagaacggaccgccg
accttgcttgtcgccttaggtgatggaagcatgttcactttcgcattgaatgaaacgact
tgcggcttaagtgaaaggaaacatataattcttggtgcgcagccaatacggttccagtca
atacctgggggaaatggtggagttactgtttttgcaacctgtgaccatccgagcgttata
tatggtagcgatgggagaattgtatacgcttctgttaccgccgataaaccaacctacgtt
acctcctttaattctcccagctttccagatgctgtcgttatagctagcgaggatgattta
aagctctccgttgtggaccctgtgaggactatgcatgtccagtcattaccagtaggggat
gttgtccgaaggatagcgtactcaaaggagaagaatattattgcaattgttacagtttca
aaagttcccgatacgaggacaggcgattatctctattcatcttgcattcgacttgtcgat
aacactgctttttctgtggttgattcctatgagctaaaccaactggagctcgttgagagt
ctcgcatctggcaagatctgtggtggaaacggattactctctgaagggtttctagcagga
accgtataccctggcgggggtagggacgagagcgaaaaaggcagaatcattgtttttaac
gcgagtgaaacgaaacgcatcaagctgatagtatcgtatgatactccgggttcggtaaat
ggaatacagattgtaggagaaggaaaattcgtggctgctataggccgagagattcatctt
tactctcttaaatacactgatattcagagtaaaacagctgcaagcgagtcggtaggcgct
actggatgtacaatcaccaagctagcaagcttcaaagcacatagtacacctcttgacgtt
gcagtctacaatgacattatcgccgtttgcgattttatgcatggtccttcgattctccag
catatagaggataaagaaaacaaaagttctgagtttgttgaggttgcaagggcaccaaag
ccgagttggcttacagctctcgagctattggatgaaaagactgttttctgcgctgacacg
gatggtaatttggttgtttggcaacggcaactctctggagtcactgaagatgacaggaag
caactgcagcaaattgcatccatgaaaattggagaggatattgataggattagaaggatc
tgcaatcagaccttggctggaagcagggttcagccaaaagcccacttatcaacggtagat
ggagctatattactctacgggcgacattcaaagctaccgtga

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