Tuber melanosporum: GSTUM_00004419001
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Entry
GSTUM_00004419001 CDS
T01282
Name
(RefSeq) hypothetical protein
KO
K22817
non-structural maintenance of chromosomes element 1 [EC:
2.3.2.27
]
Organism
tml
Tuber melanosporum
Brite
KEGG Orthology (KO) [BR:
tml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tml04121
]
GSTUM_00004419001
03400 DNA repair and recombination proteins [BR:
tml03400
]
GSTUM_00004419001
Enzymes [BR:
tml01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
GSTUM_00004419001
Ubiquitin system [BR:
tml04121
]
Ubiquitin ligases (E3)
Atypical E3
GSTUM_00004419001
DNA repair and recombination proteins [BR:
tml03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
SMC5-SMC6 complex
GSTUM_00004419001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_Nse1
zf-RING-like
zf-HC5HC2H
Zn_ribbon_3CxxC_2
Motif
Other DBs
NCBI-GeneID:
9187436
NCBI-ProteinID:
XP_002835908
INRA:
GSTUM_00004419001
UniProt:
D5G6C2
LinkDB
All DBs
AA seq
343 aa
AA seq
DB search
MSRRVMKVDDIKILLAEILSADDAEHEIGTEDINDRIVSSYISKANDMIHDFDLEIKIML
DQRDRSKTFALINTTSDELVQLATTHNADEIAFFKRVLDAIFETNNTRDAEVLAVHDFAA
VRLHKNPQQGGTSQATQGPASQSVSGLTMVGAEAALRSFVDEGWLECSKAGFYSLTTRAV
LELGPYLFQTYNTPADEDDEQEDDGSSTNGIIERIKTCHACREIVTIGLRCIDKHCKLRL
HTPCAEGIFRPNRTHECPRCKKEWSGGLPVGEEADRGQRRPRGNRQSNVGTTPRSRVNSV
PHPTSTRPVMRGARDTPIEEDSQEEEQDALGERNDDHDVEMTG
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atgtctcgtagagttatgaaggttgatgatatcaagattcttctggccgagatattgtcc
gcggatgatgcggagcacgaaataggcactgaagacataaacgatcgcatagtttcatca
tacatttctaaggccaatgacatgattcacgactttgacctcgaaatcaagattatgttg
gaccagagggatcgctcaaagacatttgctttgatcaacacgacatctgacgaactcgtc
cagctggctacaacccacaacgcagatgaaatcgctttcttcaagagggtcctcgacgca
atctttgagactaataacactcgtgatgcagaggttttggcagtccacgactttgctgct
gtaagattacacaagaatccgcagcaggggggaacttctcaggccacacaaggccctgct
agtcagagtgttagcgggttgactatggttggggcagaggcggcgttgagaagtttcgtt
gatgaggggtggctggagtgttctaaggcaggcttctattctctcacgacccgagcagtt
ctggaactcggcccttatctattccaaacgtacaatacacctgcggacgaagatgacgag
caagaagacgacgggtcttccaccaatggtattattgaaaggatcaaaacatgtcatgca
tgccgagagattgtaaccataggccttcgctgcatagataaacactgcaaacttcgactc
catactccctgcgctgaaggtatcttccgtcccaaccgcacgcacgaatgcccgcgttgc
aagaaggagtggagtggcgggttgcctgttggcgaagaggcagataggggccagagaaga
cccagagggaataggcagtcaaacgttggcacaactccgcgttcgagagttaacagtgtt
ccacacccaacgtccacgaggccagtcatgaggggcgcaagggacacacctatcgaagag
gacagccaagaggaggaacaggacgcgctaggggagcgcaatgatgatcatgatgtagaa
atgacggggtaa
DBGET
integrated database retrieval system
