Tuber melanosporum: GSTUM_00004423001 Help Entry GSTUM_00004423001 CDS       T01282                                  Name (RefSeq) hypothetical protein   KO K18664   antiviral helicase SLH1 [EC:5.6.2.6] Organism tml  Tuber melanosporum Brite KEGG Orthology (KO) [BR:tml00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:tml03019]     GSTUM_00004423001 Enzymes [BR:tml01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.6  RNA 3'-5' helicase      GSTUM_00004423001 Messenger RNA biogenesis [BR:tml03019]  Eukaryotic type   mRNA surveillance and transport factors    Transport factors     eIF4F and regulatory proteins      GSTUM_00004423001 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Sec63 DEAD Helicase_C ResIII AAA_22 Motif Other DBs NCBI-GeneID:  9187440 NCBI-ProteinID:  XP_002835912 INRA:  GSTUM_00004423001 UniProt:  D5G6C6 LinkDB All DBs AA seq 1952 aa AA seqDB search MSALPSPAFQWLRHLSRMDDALAHLLAFPGSHLPSSTEYGLDLPPHEEQVESLRTADDLF GELSRDSAPYSLSTGEAAHPPIHDHSRLLAKCNAIPTHRRSGMTAVDLGEHLLNQELQSR LVDLLGLDELEFVMDLMVHRTELAPFGLPSPSQKPLSAPDSALRLLTREERNQALRQSEL EHKSLPLGPKLSQPVENYPHVYRAHDAGNTLSSWGKKYSLPVGSQTTDHKEYEEISIPAT KVGTVRAGEKLVQIEDMDILCRNTFRNYKSLNRMQSLVYPVAYQKNENMLICAPTGAGKT DAALLTILHTISMDCTPSPGVTSGDAPIYCDKDQFKIVYVAPMKALAAEIVEKLGKRLRW LGIEVRELTGDMHLTKAEIVRTQIIVTTPEKWDVVTRKSTGDTELSLVARTQRQVESTQS MIRIVGLSATLPNFVDVALFLKVNLNQGLFYFDASFRPVPLEQHFLGVKGKPGTKLSNEN LDKTSFEKVKEMLQRNHQVMVFVHSRKDTLKTARLFYQMAVDEMCLELFDNTGHDQYNQA CKEIARSKGRELRELFKKGFGIHHAGMPRSDRNLMEKMFGDGLIKVLCCTATLAWGVNLP AAAVIIKGTQVYNAQKGQFMDLGILDVLQIFGRAGRPQFQQYGIGFICTSHDKLAHYLSA VTQQHPIESRFTERIVDNLNAEVALGTVTSIEEGIQWLGYSYMFVRWKKNPLVYGIGWQE LSDDPHLYSQRKQLIVKAARRLQQTQMIIFDEKTQSLTPKNIGRIASDFYILNNSVEIFN NMMKSQATEADILTMLSLSGEFDNIQSRDTESQELENLRKTVCPCQVGGAKGSPHAKVNI LLQSYISKANLDDFALVSDSAYVAQNSARICRALFHIALNRRWGNLCQILLSICKSIEKK IWSYQHPLAQFRLPPHIVQKLEELESTGSIEVLRDMDPAEASLSTQIGDLVHNQKMGPQI SSLLAIFPTLSVDTEIAPLNRDVLRIHLYITPDFRWDDRIHGNSESYWIWAENSETFEIY HSEFFILNRRKLHDDHELNFTIPLSDPLPPQIYIRVVSDRWLGAETVTPISFQHLIRPDT EAIYTPLLNLQPLPITALRDERLETIYGKKFQYFNPMQTQIFHCLYHTPSNVLLGSPTGS GKTIACELAMWWAFRENPGSKVVYIAPMKALVRERVKDWNARLTAPMSLKLVELTGDNTP DTRTIHDADIIITTPEKWDGISRSWQTRNYVRQVSLVIIDEIHLLGGDRGPILEIIVSRM NYIASQTDRPVRIMGLSTACANASDLSNWLGVKDGLYNFRHSVRPVPLEIYIDGFPERRG FCPLMQSMNRPAFLAIKTHSPRKPVIIFVASRRQTRLTAKDIIAFCGLEDNPRQFLHISE EDLRGLLSQVKDQSLREALQFGIGLHHAGLIESDRQLVEELFTYNRIQVLVATSTLAWGV NLPAHLVIVKGTQFFDAKTEGYKDMDLTDVLQMLGRAGRPQFDTSGIARIFTQDAKKSFY KYFLHTGFPVESSLHKVVDDHLGAEVSSGTISKKQDALDYLTWTFFFRRLHKNPTYYGLE IPPEEQDSLSAMEEANRYLVEMVDNSVKELSKSECVIAYPNGDLESTPLGKIASYYYLSH KTIRNLVRHAKRQATLEDCLGWVCTATEYDELPVRHNEDLINVELSKALPFRAEKLGLPM WDPHIKAFLLVQAFISRIELPISDYITDQNSPFVFMANLKQASIDVLAELGYLSTTSAMI TLMQSIKQARWPGDGALSFLPGIEPSIEKSLRENDTVAPLLPKDLASLSQLPAKDLRKLA DRAGIPQAGRQFLLAASSIPQISISATTATTSTLSATLTRQNAPQSRDFRIYAPKFPKPQ TEGWFVLLGDFRKDELHALKRVGWLTRGGAGGGKPSVKFSLGLPEGCVLEGLDGTLVVMS DGYLGLMQRTGVHLQTKQVVPGTWIEKEGGDG NT seq 5859 nt NT seq  +upstreamnt  +downstreamnt atgtctgcgctaccgtctcccgccttccaatggcttcgacatctctctcggatggatgat gccctggcgcatttattggctttccccgggtcccacctcccttcttctaccgaatatggt ctagatttgccgccccatgaggagcaagttgaatctcttcgcactgccgacgatcttttc ggtgaactttcgagggacagtgctccatattctctatcaaccggcgaagcagcgcatccc ccaatccacgatcattcccggctcttagcaaagtgcaatgccatccccacgcaccggcgt tccgggatgacggcagttgacttgggagaacatcttctcaaccaagaattacaatctcgt ctggttgaccttttaggcctagacgaactcgaatttgtcatggacctgatggttcaccgc acggaacttgcccctttcggtcttccttctccttcccaaaagcccctatctgcgccagac tccgctcttcggctcctaacacgcgaggagcgtaaccaagcactcaggcaatcagaacta gagcataaatctctccctttgggccctaagctttcccaacccgtggaaaactatcctcat gtgtatcgtgctcatgatgcaggcaacaccttaagttcctggggcaaaaagtattcattg cccgtaggatctcaaactactgatcacaaggagtacgaagaaatttcgatacccgcaaca aaggtcggcacagttcgtgccggagagaagctcgttcaaatcgaggatatggacatcctg tgtcgtaatacattccgtaactacaagtccttaaaccggatgcagtcccttgtctacccc gtcgcttatcaaaaaaatgaaaacatgttgatatgtgcacctacgggagctggcaaaacc gacgctgctctgcttaccatcttgcataccattagtatggattgtaccccctcaccaggt gtcacttcaggtgacgccccgatatactgcgataaagaccaattcaagatcgtttatgtt gctcccatgaaggccctggccgccgagatagtggagaaactaggcaaacgtcttcgttgg ctaggtatcgaagttcgtgaattgacaggcgatatgcatttgacaaaagctgaaatcgtt cgcacacaaattatcgtcactacaccagaaaaatgggacgttgtcactcggaagtcaaca ggggatactgaattgagtctggtcgcaaggacccagcgccaagttgaatcaacccaatca atgatccggattgttgggctatcagccacacttcccaacttcgttgatgttgcgttgttt ctgaaagtaaaccttaaccaagggctgttttattttgacgcctcatttcgcccagttccc ctcgaacaacacttcctgggtgtaaaaggaaaacccggaacaaagctttctaacgagaac cttgataagacttcttttgaaaaagtgaaagaaatgcttcaacgcaatcaccaagtcatg gtattcgttcattctcgtaaagatacattgaaaactgctagacttttctaccagatggca gtggatgagatgtgccttgagctctttgacaataccggacatgatcaatataatcaagcg tgtaaggagattgcacgatccaaaggaagagaattacgggagctttttaagaagggattc ggtatccatcatgccgggatgccaagatcagacaggaacctcatggagaagatgtttggg gatggtttgattaaggttctctgctgcactgcaacacttgcatggggtgttaatctgcct gcggcagcggtcataataaaaggtacccaggtctataatgcacagaagggccagttcatg gatcttggtatcctcgatgttcttcagatatttggaagagcgggaagacctcaattccag cagtacggaattggtttcatttgcacttcgcatgacaaactagcccattatctctctgct gttacccaacagcatcctatcgaatcaagatttacagaaaggattgtagacaatctaaat gcagaggttgcattgggaaccgtcacttcaattgaagaaggaattcaatggctgggctac tcgtacatgttcgtcaggtggaagaaaaaccctttagtatatggaattgggtggcaggag ctatcagacgatcctcacctctactctcagcgaaagcaattgatcgtcaaggcagcccgg cgcctccagcaaacgcagatgattatttttgacgagaaaacacagagtttaaccccaaag aacattgggcgaattgcgagcgacttctacatcttgaacaatagtgttgagatattcaat aacatgatgaaatctcaggccacagaagctgacatacttaccatgctcagccttagcgga gaatttgacaacatacagtcgagagatacggaaagtcaagaactagaaaacctccgtaaa actgtgtgcccctgccaggttggcggtgccaaaggcagcccgcatgccaaagtcaatatc ctgctacagtcttacatatccaaagccaatctagatgacttcgctttagtatctgattct gcatatgttgctcaaaactcggccaggatctgtcgtgcactctttcacattgcactcaac cgacgctggggaaatttgtgccaaattctgctttccatttgtaaatcgatagagaagaag atatggtcatatcagcacccactcgcacagttcagactcccacctcatattgttcaaaag cttgaagagctggaatcaacaggttcaattgaggtccttcgagatatggatccagcagag gcaagcttaagtacgcagattggtgatcttgtccataaccaaaagatgggacctcaaata tcttcgctactagctatctttcctactcttagtgtagacactgaaattgctccgttgaat cgcgacgttctacggatacatctttatattactccagattttcgatgggatgataggata cacggaaactcggagagctattggatttgggctgaaaattccgaaacatttgaaatatat cactctgaattctttattctcaaccgcaggaagttacatgatgaccatgagctgaatttc actattccattgtcggacccgctgccgccccaaatatatattagggtggtttcggaccgc tggctgggtgccgaaacagtaaccccaatatcttttcagcatcttatcaggcctgatacc gaagcaatatatacaccactactcaaccttcagccattacctattaccgctttgagggat gaacgtctagaaacaatatacggcaagaaatttcaatatttcaacccaatgcagacccaa atatttcattgcctctaccacaccccttcgaacgtattactcggttctcccactggcagc ggcaagactatcgcttgtgagctagcgatgtggtgggcattccgtgaaaaccctggctca aaagtagtctacatagcaccaatgaaagcgcttgtccgcgagcgcgttaaagattggaac gcaaggttgacagctcccatgagtttgaaacttgtggaactcactggggacaatacgcca gatacaagaaccattcatgatgctgatataatcatcacaactcctgaaaaatgggatggt atatctagaagctggcaaacaagaaactatgtccggcaggtatctcttgtaattattgat gaaatacatcttttaggcggtgaccgaggcccaattctcgagattattgtttcaagaatg aattacattgcctcgcagacggatcgcccagttcgtataatggggctgtcaactgcctgt gcaaacgcttctgacctctcaaattggcttggggtcaaagatggcctctataacttcaga cactccgttcgtccagtgcctctggaaatctatatcgacggcttcccggaacggcgtggc ttttgccccttgatgcagtcaatgaataggccagcttttctcgcaatcaagacccactca ccgagaaagccagttataatatttgtggcatcgcgcaggcagacccggcttacagccaaa gacataatcgcattctgtggtcttgaggataatccaaggcagtttctgcacatctcggaa gaggatctgcggggccttttgtcacaggtaaaagatcaaagtctaagggaagcgttacag tttggtattgggctccatcatgctggtctgattgagagcgataggcaactcgttgaagag ttattcacctataatagaatacaagttctggttgctacaagcacacttgcctggggggtc aacctccccgctcatctagttattgtcaaagggacacaattttttgacgccaaaactgaa ggatataaggacatggatttgactgatgttcttcaaatgctagggagagcagggcgtcca cagtttgacacatctggaattgcccgaatattcacacaagatgccaaaaaatccttctat aagtactttctccatacgggctttccagtagagtcctcactacacaaggtagttgatgac caccttggggccgaagtatcctcaggaacaatttcgaaaaaacaagacgccctagattac ctcacatggacttttttcttcagaagactacacaagaacccaacgtactacgggcttgaa atccctccagaggagcaggactccttatcagccatggaagaggcaaatcgttacttggtg gaaatggtcgacaattctgtgaaagagttgagtaaatctgaatgtgtaatagcatatcca aacggagatctcgagtcaaccccgctggggaagatcgcaagctattactatctttcccac aaaactattagaaatctcgtccgccacgcaaagcggcaagccacactcgaggattgccta gggtgggtgtgcaccgctaccgaatacgatgaacttccggttaggcataatgaggatttg attaatgtagagctctcaaaagccctccccttcagggcagagaaactcggactccctatg tgggaccctcacattaaagccttcctcttggttcaggccttcatttcgcgtatagaactt ccgatatcggattacattaccgaccaaaactccccgtttgtctttatggctaatcttaaa caggcttccatcgatgtccttgccgaactcggctacctctcaactacaagcgccatgata accctaatgcaaagcataaaacaggcccgctggccgggcgatggtgccctgtcattcctc ccaggcatagaacccagcatcgaaaagtcacttcgcgaaaacgacaccgtcgcaccgcta ctccccaaggatttggcaagcctatcgcaactgccagccaaagaccttcgcaaactcgct gaccgggcaggaatcccgcaggccgggcgacagttccttcttgcagcctcttcaatcccg caaatctccatttccgcaactaccgctaccacctccaccctttccgccaccctgacccga cagaacgcaccccaatcccgagacttccgcatctacgctccgaaatttccaaagccgcaa acggaagggtggtttgtgctactgggtgattttcggaaggatgaattgcatgctctcaag agagttggatggttgactcgcggcggagccggaggggggaagccaagtgtcaagttctcg cttgggttgcccgaggggtgcgtgctagaggggcttgatggtacattggttgtgatgtcc gatgggtatttggggcttatgcagaggacgggggttcacttgcagactaagcaggttgta cctgggacttggattgagaaggaggggggggatgggtga

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