KEGG   Tuber melanosporum: GSTUM_00004435001
Entry
GSTUM_00004435001 CDS       T01282                                 
Name
(RefSeq) hypothetical protein
  KO
K11600  exosome complex component RRP41
Organism
tml  Tuber melanosporum
Pathway
tml03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:tml00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    GSTUM_00004435001
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tml03019]
    GSTUM_00004435001
Messenger RNA biogenesis [BR:tml03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     GSTUM_00004435001
 Prokaryotic type
  Archeal mRNA degradation factors
   Exosome components
    Cofactors
     GSTUM_00004435001
SSDB
Motif
Pfam: RNase_PH RNase_PH_C
Other DBs
NCBI-GeneID: 9181163
NCBI-ProteinID: XP_002835921
INRA: GSTUM_00004435001
UniProt: D5G6D5
LinkDB
AA seq 278 aa
MECVTCGATFRGLRLCHSNPTHDTSHNRPSSHLHKPSSLPSTSHSFLKKLENVPLRNPLT
RRPPHRRPSYVEHGNTKVICSVNGPIEPRAASARNSERATVTVDVCFAAFSGTDRKKRGK
SDKRVLEMQSALSRTFATTLLTTLHPRSEVHISLHILSQDGSILATCVNAATLALVDAGV
PMSDYVTACTVASYTNPDESGEPLLDMSSAEEMDLPGITLATVGRSDKISLLQLETKVRL
ERLEGMLAVGIDGCGKIRQLLDGVIREHGNKMARMGAL
NT seq 837 nt   +upstreamnt  +downstreamnt
atggagtgtgtaacttgcggtgcaacatttcggggtttgcggctctgccattcgaacccc
acccatgatacatcccacaatcgaccctcctcccatctccataaaccctccagtttgccc
tctactagtcactcgtttcttaaaaaattagaaaatgtcccgctacgaaatcctctcacc
agaaggcctccgcaccgacggccctcatacgtggagcacggcaacacaaaagtgatttgt
tccgtcaacggccccatcgagcctcgcgccgctagcgctcgcaattccgagcgcgcaacg
gtcacggtggacgtctgcttcgcggcgttcagcgggacagataggaagaagagagggaaa
agcgataaacgagtgctagaaatgcaatccgccctctcccgcaccttcgccaccaccctc
ttgaccaccctgcacccgcgctccgaggtgcacatcagtctgcacatactctcccaggac
ggctcaatcctagccacttgcgtcaatgccgccacactcgcgctcgtcgacgctggcgtg
cccatgtcggactacgtgaccgcttgcaccgtcgcgtcctacaccaacccggacgagtcg
ggcgaacccctgctcgatatgagctccgccgaggagatggacttgccgggtatcacactc
gcgactgtgggcaggagcgataagatttccttgctgcagttggagactaaagtgcgcctg
gagagacttgagggtatgctagctgttggcattgatgggtgcgggaagatcaggcagttg
ttagatggggttattcgcgaacatgggaataagatggcaaggatgggggcgctgtga

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