Tuber melanosporum: GSTUM_00004443001
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Entry
GSTUM_00004443001 CDS
T01282
Name
(RefSeq) hypothetical protein
KO
K00801
farnesyl-diphosphate farnesyltransferase [EC:
2.5.1.21
]
Organism
tml
Tuber melanosporum
Pathway
tml00100
Steroid biosynthesis
tml00909
Sesquiterpenoid and triterpenoid biosynthesis
tml01100
Metabolic pathways
tml01110
Biosynthesis of secondary metabolites
Module
tml_M00102
Ergocalciferol biosynthesis, FPP => ergosterol/ergocalciferol
Brite
KEGG Orthology (KO) [BR:
tml00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
GSTUM_00004443001
09109 Metabolism of terpenoids and polyketides
00909 Sesquiterpenoid and triterpenoid biosynthesis
GSTUM_00004443001
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
tml01006
]
GSTUM_00004443001
Enzymes [BR:
tml01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.21 squalene synthase
GSTUM_00004443001
Prenyltransferases [BR:
tml01006
]
Terpene biosynthesis
Squalene/phytoene synthase
GSTUM_00004443001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SQS_PSY
HTH_69
Motif
Other DBs
NCBI-GeneID:
9181169
NCBI-ProteinID:
XP_002835927
INRA:
GSTUM_00004443001
UniProt:
D5G6E1
LinkDB
All DBs
AA seq
472 aa
AA seq
DB search
MKTSDILYLLAHPNQLRAIIQWKVWHNPLHQRKIENESLTLRRCFEFLDLTSRSFSAVIQ
ELCPELCVSVTLFYLILRGLDTIEDDMTIPLEIKEPLLRSFDKVLDKEGWTFDGNGPKEK
DKQLLVEFSNVITEFALLSESHRAIIKDITKKMGNGMADYANNAEHNVNGVNTIADYDLY
CHYVAGLVGDGLTRLFVDTGKANPALLERPHLINSMGLFLQKTNIIRDYREDLDDKRRFW
PKEIWTKHIEKYEELHLPENEEAALNCISEMCLNSLQHVDECLFYLAGIKDQSVFNFTAI
PQVMAIATLALVFRNKDVFHKNVKIPKGEACELMIEAGNLRSTCDIFRKYMKIIHKKNTP
KDPNFLNISVTIGKVEQFIETIFPTAVEPRVVAQRAQMRATGETPEQAAAAKKEMMFLIC
AIVATLSVISGVMIFAAWLMGARFDIAFQELRKGNFGPPGYNPVADARHGEL
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atgaagacatccgatattctctacctgcttgctcatcctaatcaattgagggcgataatt
caatggaaagtctggcacaacccactccaccagcggaagattgagaacgagtctctcacc
ctgcgaagatgttttgagttcttggatctcacatcgcggtctttcagtgctgttattcaa
gagctgtgccctgagctttgcgtctcggtgacactcttctaccttatccttcgtggtctc
gacaccatcgaggatgacatgaccattccactagaaattaaggagccccttttgcgctct
tttgacaaagttctcgacaaagaggggtggacttttgacggtaatgggcccaaggagaag
gataagcagctccttgtggagttcagcaatgtgattacggagtttgccctattgtccgag
agccatcgggcgattattaaggacattaccaagaagatggggaacgggatggccgactac
gctaacaatgccgagcataatgttaacggagtcaacacaatcgctgattacgacctgtac
tgtcattacgttgccggtctagttggcgacgggttgacacgccttttcgttgacaccggg
aaagccaacccggctctcctcgaacgacctcatctaatcaactcgatgggtctttttctt
caaaagaccaacattattcgtgattacagggaggatctcgacgataagcgacgattctgg
cccaaggagatctggacgaagcatattgaaaaatatgaggaattgcacttaccggagaac
gaggaggcggcattgaattgtatctctgagatgtgtttgaattcccttcaacatgttgat
gagtgtttattttatcttgctggaatcaaagatcagagcgtgttcaattttaccgctatc
cctcaggtgatggcaattgctaccttggccttggtgttccggaataaggatgtcttccac
aagaacgtgaaaatccctaagggtgaggcctgcgagctcatgattgaggccggaaatctg
cgatctacttgtgatatcttccggaaatatatgaagatcattcacaagaagaacaccccc
aaagatcccaacttccttaatatcagcgtcactattggcaaggttgagcaattcattgag
accatcttcccaactgcggttgagcccagggttgttgcacagcgtgcgcagatgcgagct
acgggcgagacgccagagcaagcggcggcagcgaagaaggagatgatgttcttgatctgt
gccattgttgcgaccttgagtgtaatttctggagtaatgatcttcgctgcatggttaatg
ggagcccggttcgacattgctttccaggaactccggaagggcaacttcggacccccaggg
tacaatccggttgctgatgctcggcacggcgagctctaa
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