Tuber melanosporum: GSTUM_00004689001
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Entry
GSTUM_00004689001 CDS
T01282
Name
(RefSeq) hypothetical protein
KO
K03514
non-canonical poly(A) RNA polymerase PAPD5/7 [EC:
2.7.7.19
]
Organism
tml
Tuber melanosporum
Pathway
tml03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tml00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
GSTUM_00004689001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tml03019
]
GSTUM_00004689001
03016 Transfer RNA biogenesis [BR:
tml03016
]
GSTUM_00004689001
Enzymes [BR:
tml01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
GSTUM_00004689001
Messenger RNA biogenesis [BR:
tml03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
TRAMP complex
GSTUM_00004689001
Transfer RNA biogenesis [BR:
tml03016
]
Eukaryotic type
tRNA degradation factors
TRAMP complex
GSTUM_00004689001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MTPAP-like_central
NTP_transf_2
Nrap_D5
Motif
Other DBs
NCBI-GeneID:
9181376
NCBI-ProteinID:
XP_002836366
INRA:
GSTUM_00004689001
UniProt:
D5G7R4
LinkDB
All DBs
AA seq
511 aa
AA seq
DB search
MTDRLASFVTRLCLSSEVIAGRGASIVRQRCVVHSIWPRASCYPVGSFQTRTSLKNSDVD
LLVSIPGQSDEHKCMVEAATRMREAIIGRRIAEPRNCTVIGGAKVPILTYTDEKVTPPLK
FDISFQKENAVRNTAYLVQTFDERPFMRDLVILMKYWLRERRLNEVYKGGLGSYAVSLTV
IGFFNVNRRTLIPRDYQALITGSRHDMFVEYLKFWTRWKYNEDILVPDPGIIQKMAPGKR
KRLPFMLRMVDPTDPDNDVGKAAYKIPKVITAMKKLRHGMENLGPDTGVSELDKLLSGTL
GEKERYLKEKFHQDRNDRKMFRQMQKRIEEVERKAVKSGREGKSVKKSLARMRASRDEFA
RRRPALAAEFARPEPLPEDTGAPVHDPPGPGYDFDLDTLMIGPVEKEVSRWIPKEPTEAK
SQNDETLTPIMSGGKSPEQLQLERAKHIATIEAKRVRREKTLQKRHEKLLKKKEKKAQKK
IAAEKKLLEGEEELAKRPKASKVAAEKEAGN
NT seq
1536 nt
NT seq
+upstream
nt +downstream
nt
atgactgaccgcctcgcatcattcgtaacgcgtctctgcttatcatcagaagtaatcgcc
ggccgaggcgcaagcatcgtcagacagagatgtgtcgttcactccatctggccaagagca
tcgtgctacccggtaggttcgttccagacgaggaccagtttgaagaatagtgatgtcgac
cttctcgtatccatccccggacaaagtgatgagcataaatgcatggttgaagcggctact
cgtatgagggaagccatcatcgggcggcgcatcgccgagccgcggaactgcacggtcata
gggggcgctaaggtacccatattgacgtacacggacgagaaagtgacgccgccgcttaag
tttgatatatcgtttcagaaggagaacgcggtcaggaatacggcgtacttggttcagacg
tttgatgaaagaccgttcatgagggatcttgtcattcttatgaagtattggctacgggag
aggcgattgaatgaggtttataaaggcggtttggggtcttatgctgtatctttgactgtt
attgggttttttaatgtcaatcgaaggactttgattcctcgagattaccaagccctcatt
accggttctaggcacgacatgtttgtggagtacctcaaattctggacaagatggaaatat
aacgaagatatcctggtaccggatcccgggataatacagaaaatggcaccaggcaagagg
aaacgcttgccattcatgctccgaatggtagaccctaccgacccagataacgacgtcggg
aaggcagcctacaagattcccaaggtcatcacggcaatgaagaagttgaggcacggaatg
gaaaatctcgggccggacacgggggtgtcggagcttgacaaattgctcagtggcactcta
ggggaaaaggaaaggtacttgaaagagaagtttcaccaggaccgcaacgaccggaagatg
ttccggcagatgcaaaagaggatcgaggaagtggagaggaaggcggtgaagtcaggaagg
gagggcaaatcggtgaagaagtcgctagcaaggatgagagcgagtcgtgatgagttcgcc
cgtaggagaccagctctcgcagctgaatttgcgaggccagagcccctccctgaagatact
ggtgctcctgtgcacgatcctccaggccccgggtacgattttgacctggatacgctcatg
atcggcccggtcgagaaagaggtgtcgcgatggatccccaaagaacccaccgaagcgaaa
tcacaaaatgacgagacgcttactcccataatgagtggggggaaatcccctgagcaacta
caactagaaagagcaaagcatatcgcaactatagaggcgaaacgggtgaggagggagaag
acgttacaaaagcggcatgaaaagttgctaaaaaagaaggagaagaaagcgcagaaaaaa
atagcagccgagaagaagctactggagggggaagaggagttggctaagaggccgaaagcc
agtaaggtggctgcggaaaaggaggctggaaactga
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