KEGG   Tuber melanosporum: GSTUM_00004748001
Entry
GSTUM_00004748001 CDS       T01282                                 
Name
(RefSeq) hypothetical protein
  KO
K12876  RNA-binding protein 8A
Organism
tml  Tuber melanosporum
Pathway
tml03013  Nucleocytoplasmic transport
tml03015  mRNA surveillance pathway
tml03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:tml00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    GSTUM_00004748001
  09122 Translation
   03013 Nucleocytoplasmic transport
    GSTUM_00004748001
   03015 mRNA surveillance pathway
    GSTUM_00004748001
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tml03019]
    GSTUM_00004748001
   03041 Spliceosome [BR:tml03041]
    GSTUM_00004748001
Messenger RNA biogenesis [BR:tml03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     GSTUM_00004748001
Spliceosome [BR:tml03041]
 Complex C
  Other components
   EJC/TREX
    GSTUM_00004748001
SSDB
Motif
Pfam: RRM_1 RRM_3
Other DBs
NCBI-GeneID: 9188374
NCBI-ProteinID: XP_002836581
INRA: GSTUM_00004748001
UniProt: D5G8C9
LinkDB
AA seq 172 aa
MADNAEMDLDEVPPVGENEASSKASSNPKTAAGAFAVRSIEGWIVLVTNVHEEASEEDLQ
DRFGEFGDIQNLHLNLDRRTGYVKGYALIEFSTLSEAREAIARTNNTKLLEQTIYSDFAF
VRPPPTSHNSRGGGGSRRGGGGRGGPGRPRSRSPGAKDEAAASRSLQDRITS
NT seq 519 nt   +upstreamnt  +downstreamnt
atggccgataatgctgaaatggacttggatgaggttccccccgtcggggagaatgaagca
agctccaaagcttcctctaatcccaagacagccgcaggagccttcgccgtccgctcaatc
gaaggttggattgttcttgtgaccaatgtccacgaggaagcgagcgaggaggatctacag
gaccgattcggcgaatttggcgacattcaaaatcttcatcttaacttggatcgaagaaca
ggctacgttaaaggatacgctttgatcgaattctccacactttccgaagctcgcgaagca
attgcccgtaccaacaatacaaagttactcgaacagactatatactcggattttgcgttc
gttcgcccaccacccacttcccacaatagccgtggaggcggaggaagtagacggggcgga
ggcggccggggaggacccggtcgccccaggagtaggtcaccgggtgcaaaggatgaagcg
gctgctagcaggagtttgcaggatagaattacctcgtaa

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