Tuber melanosporum: GSTUM_00004767001
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Entry
GSTUM_00004767001 CDS
T01282
Name
(RefSeq) hypothetical protein
KO
K02999
DNA-directed RNA polymerase I subunit RPA1 [EC:
2.7.7.6
]
Organism
tml
Tuber melanosporum
Pathway
tml03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
tml00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
GSTUM_00004767001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tml03021
]
GSTUM_00004767001
Enzymes [BR:
tml01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
GSTUM_00004767001
Transcription machinery [BR:
tml03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
GSTUM_00004767001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_2
Gon7
Motif
Other DBs
NCBI-GeneID:
9186000
NCBI-ProteinID:
XP_002836589
INRA:
GSTUM_00004767001
UniProt:
D5G8D7
LinkDB
All DBs
AA seq
544 aa
AA seq
DB search
MNISNPVSSEVTGVNFTFLCKDDITKLSVKQVVNPATFETVIPGNVPVPVVGGLYDPALG
ASDALRQRCLTCHLDYKYCPGHVGHISLPVPVYHPLFFDQMLKMLRSSCLYCFHFRMARA
EVNRFECKLKLIQYGLLVEAAELDDIHPNTRGEEEGEEGEFSGSTEMEAFYAKREKFVAR
AIRRHLRSGGLDEGKVMSVAEERRKVVKEFLSTIQFPRKCNRCQAISPGFRKDGYSKIFE
VPLTPKAQSQNVQYGFQRPNAAMMQKKPNRLPETKNHDLNRKGAAGRLLHSMEVLNNLSR
LFEKEREILQLLYQPREAISKTPKPLTPEMFFIHAIAVPPTKFRPPQAAGGEISESATNK
QLVKILQGCLAIRDYNDKFNNPEIEAGAKTVIISKLMQAFVTLQDDVNSFLDSSKSPLTG
AAARTLEEGIKQKLEKKEGLFRMNMMGKRVNFAARSVISPDPNIETREIGVPPVFASKLT
YPEPVTEINHQWLMRLRIHLSKTLLTPDALSLSDSKSKRVHRHLLNGDVVLMNRTYDPYA
LRQL
NT seq
1635 nt
NT seq
+upstream
nt +downstream
nt
atgaacatttccaatcctgtgtcctctgaagtcacaggagtcaatttcacctttctctgc
aaagacgacatcacaaaactctctgtcaaacaggtcgtcaatcctgcgactttcgaaact
gttattcccggaaacgttcctgtgccggtagtgggcggcttgtacgatccagcactcgga
gcttccgatgcgctgaggcagcggtgtttgacatgtcaccttgactacaagtattgtccc
ggccatgtcgggcacatttcattgcccgtgccggtttaccatcctttgttttttgatcag
atgttgaagatgctgagatcttcatgtctttactgctttcactttcggatggccagggca
gaggttaatcgtttcgagtgcaaacttaaactcattcaatacgggctgttggtcgaggcc
gcggaattagacgatatccatcctaatacgaggggagaggaagagggcgaggaaggtgag
ttttctggaagcactgaaatggaagctttttatgcaaagcgggaaaagtttgtggcgagg
gccattcgaaggcatttgcgctctggtggcttggatgaggggaaggtcatgtcagttgcg
gaggaacggaggaaagttgtcaaggagtttctcagcactatccagtttccaagaaagtgt
aataggtgtcaggcaatttcaccaggattccgaaaagatgggtactcaaaaattttcgag
gtaccgcttacccccaaagcacaaagccagaatgtccaatacggcttccaaagacccaat
gcagctatgatgcagaagaagcctaaccgcttgccggaaacaaagaatcatgatctcaat
cggaagggtgctgctggccgtcttctacatagcatggaggttctgaacaacctttcgcga
cttttcgagaaggagagggaaattctccaactactataccaaccaagagaagctatttcg
aagaccccaaaacctctaacacctgagatgttctttatccacgctatcgctgttccacca
accaagttcagaccccctcaggctgccggaggtgagatttccgagtcagcaacaaacaag
cagttagtaaagattctacaaggatgcctagccatccgtgattacaatgacaaattcaac
aacccggaaatagaggctggggcgaaaaccgtcatcatcagcaagctgatgcaagccttt
gtaaccctccaagacgacgtgaactcgttcttagactcatcgaaaagcccgcttactggc
gcggccgcaagaacattagaggaaggtatcaagcagaaacttgagaagaaggagggccta
ttccgaatgaacatgatggggaagcgtgtgaattttgccgcccgatcagttatctctcct
gatccgaatattgagacaagagagattggcgtaccaccggtatttgcaagcaagcttacg
taccccgaaccagtgacagaaatcaatcatcaatggttaatgcgactaagaatccacctc
tctaaaacactcttgactccagacgcgctttctttgagtgactcaaagtccaagagagtt
catagacatttgctcaatggagatgttgtgttgatgaaccgaacgtacgatccgtatgca
ctacgccaactgtaa
DBGET
integrated database retrieval system