Tuber melanosporum: GSTUM_00004952001
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Entry
GSTUM_00004952001 CDS
T01282
Name
(RefSeq) hypothetical protein
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
tml
Tuber melanosporum
Brite
KEGG Orthology (KO) [BR:
tml00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
GSTUM_00004952001
Enzymes [BR:
tml01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
GSTUM_00004952001
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Paralog
GFIT
Motif
Pfam:
RhgB_N
CBM-like
fn3_3
CarboxypepD_reg
N4_GP8
NOMO1-like_2nd
PEGA
NUMOD4
Motif
Other DBs
NCBI-GeneID:
9181298
NCBI-ProteinID:
XP_002836824
INRA:
GSTUM_00004952001
UniProt:
D5G922
LinkDB
All DBs
AA seq
527 aa
AA seq
DB search
MYLLSLFLALALRPLLVFATWGYTDDGSNYVIDVGSKLVFKVSKTNGDINSIVYRGTEYQ
GYSGKNSHIQSGLGRSTVTIASHTSPANLLMVTITYGTLVHYIVARSGQNDIYLLTNKGD
ASVAALRFILRLKPNIFPHDLSTPDFYDNVGATVEASDVVRNSNGYTKSKHYQGSNYGRV
MDFDYVGKTTGKVGVWLIRSNHEKASGGPNVAEDLYEILFYSMCHTDPERWGLHGPYVLS
FTDGDTPKKELFARNPNWSWFDTLGIKGWVADSARGYVAGIGIANMKSGHTYTVALSNAD
YQYWGVAASGRGAYTIKRVVPGTYKLTVYKGEYGVYTTSVSVNAGSATALHTITPDSDPS
DVAAIWRIVHSINNPQPTYMHPSDPRLSSWGPEDFTVGKTAISSFPGYMWKDVNNDHLVY
FKLTAGQIASAKTIRIGITEAYANGRPTIAVNGWTSPLPSASTQGSTRSLTVGTYRGNNH
IYSFTVPASAFLTDVTQWNILKITIISGSGNTGYLSAGISIDCVDLY
NT seq
1584 nt
NT seq
+upstream
nt +downstream
nt
atgtatctactctcacttttccttgcgttggccctgaggccactgctcgtgtttgctact
tggggatatacagatgacgggtcaaattatgtgattgatgtcgggtcgaagcttgtcttc
aaggtttccaaaactaatggggatatcaactcgatcgtatacagagggacagagtaccaa
ggttactccggcaagaactcccacatccagtcaggccttgggagaagtactgttaccata
gcatctcatacaagcccggcgaaccttctcatggtcactatcacatatggcaccctggtt
cactacatagtagcaagatctggccagaacgatatctaccttctcaccaacaaaggtgat
gcgtcagtagcagccttaagattcattcttcgtctgaagccaaatatcttcccccacgat
ctttccacaccggacttttacgataacgtcggcgctaccgttgaagcctcagatgtcgtt
cggaattcaaatgggtataccaagagcaaacactaccaaggcagcaactatggaagagta
atggactttgactacgtcggaaaaaccactggcaaagtcggcgtctggctcatccgctcc
aaccacgagaaagcctctggcggacccaacgtcgccgaagacctctacgagattctcttc
tacagcatgtgccacaccgatcccgagagatggggcttgcacggcccctatgttctctct
ttcaccgatggcgacacaccaaaaaaggagctatttgcccggaatccgaactggtcctgg
ttcgacacactcggaattaagggatgggtcgcggactccgcacgcggttatgttgccggc
attggcatcgcgaatatgaagagtgggcacacgtatactgttgcgctgtccaacgcggat
tatcagtactggggggtcgcagcaagtggccgtggtgcctacactattaagagggtcgtt
ccggggacctataagctcacggtgtacaagggggaatatggtgtttatactaccagcgtt
tcggttaatgccgggtctgctactgcattgcacacaattacgccagattctgatccttct
gacgttgcggcgatttggagaatcgtacattcaattaacaatccacagcctacatacatg
caccccagtgatcctcggctctcctcctggggccctgaagatttcactgtcggcaaaact
gcaatcagcagcttcccaggttacatgtggaaagacgtgaataacgaccaccttgtctac
ttcaagctcacagcaggacaaatagcctccgcaaagactatacgtatcggaatcacagaa
gcgtacgccaacggccgacctaccatcgctgttaacggttggacctctccactcccgtct
gcatctacacagggcagtaccaggagtttgactgtggggacgtataggggaaataatcat
atttatagctttaccgtcccagcatccgcattcctgacggatgttactcagtggaacatc
ctaaagattacaattataagtgggagtggaaataccggatacctgagcgctgggatttcg
attgattgtgtggatctttattag
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