Tuber melanosporum: GSTUM_00005073001
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Entry
GSTUM_00005073001 CDS
T01282
Name
(RefSeq) hypothetical protein
KO
K15731
carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase [EC:
3.1.3.16
]
Organism
tml
Tuber melanosporum
Brite
KEGG Orthology (KO) [BR:
tml00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
tml01009
]
GSTUM_00005073001
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tml03021
]
GSTUM_00005073001
Enzymes [BR:
tml01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
GSTUM_00005073001
Protein phosphatases and associated proteins [BR:
tml01009
]
HAD phosphatases
Fcp/Scp phosphatases
GSTUM_00005073001
Transcription machinery [BR:
tml03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
GSTUM_00005073001
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NIF
Motif
Other DBs
NCBI-GeneID:
9188529
NCBI-ProteinID:
XP_002837095
INRA:
GSTUM_00005073001
UniProt:
D5G9U3
LinkDB
All DBs
AA seq
609 aa
AA seq
DB search
MSTEKQAPLNGDVTSGSATRAISHERSSSNVTDSDKGRNSESSPLAPPAPPIRTSSIQPI
APRSSADEPSSSPSTPVPPPSTSTAGTEVPPPAALSTANASASQKRNSLLAVPTRTSSTK
QAEQSPTSTSSTAVTATGDNTSTTSRKGRRRREAGSNGSSLNSGEEGRPRKQAGGLGKFF
GFLCCRSGASAEEMQPGPRRTNKRPGSASSRKATPVGKEHALKTSKDSGVAESRDAADAG
KPGDDGNTIRSETTKGDPTSAASVALSSGSEDEDKIKRVDGEVLVGEKIVVKDDSTAKEG
AGAGQNSSLLSGSTPTVTIQAPTPTAPQTEKDEPDFTTSDPQSSKEAGTSTSEDIEMRDA
DGEDYDATGKKGSELKIQLPLPPHSEESGRDSESDDTQQRSSDGGYPHDPRDAALIRTPS
LDERQQWLLPPLAPRFEGKKCLVLDLDETLVHSSFKVLHQADFTIPVDIEGSFHNVYVIK
RPGVDEFMKRVGELYEVVVFTASVSKYGDPLLDQLDIHHVVHHRLFRDSCFNNQGNYVKD
LSQLGRDLKDTIIIDNSPTSYIFHPQHAVPISSWFSDAHDNELLDLIPVLEDLSTQDVRD
VTLVLDVSL
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
atgtctaccgagaaacaagcacccttgaatggggacgtgacatctggctccgccacgcgg
gcaatctcacacgagcgaagttcgtcgaatgttactgattcagataaaggccgtaattcg
gagtcatcccctttagcacccccggcaccccccattagaacttcgtcgatacaaccaatt
gccccacgctcctctgcagacgaaccttcatcatctccatcaacacctgtgcctcctcca
tcaacctcgactgctggaaccgaggtgccgccacctgctgcgctgtcaactgctaacgcc
tccgcttctcagaagcgaaactcgttgctcgctgtccccacccggacgtcatcaacaaag
caggctgagcagtcaccaacctccacaagcagtaccgctgtcaccgcgaccggcgacaat
acgtctaccaccagtcgtaagggaaggcggagaagagaggcggggagtaatgggagtagt
ttgaactctggtgaagaaggacgtcctcgcaaacaggctggcggtttggggaagtttttc
ggatttttatgctgccgaagtggcgcatctgcggaggaaatgcaacccggtccacgcagg
actaataagaggcctggatctgcatcttcccgcaaagcaactcctgtcgggaaagagcat
gcacttaaaacttcaaaagatagcggtgttgccgaatctagggatgcagcggatgctggg
aagcctggggatgatggcaatacaatccgttccgagaccaccaagggggacccgacatct
gccgcatctgttgcgttaagctccggatccgaggatgaggataagataaagcgggtggat
ggtgaagttcttgttggggagaagattgttgtaaaagatgactccactgccaaagaaggg
gcgggggcggggcaaaacagttccttgttgtccggtagcacaccaactgtcaccatacag
gcgcctacaccaacggcgccccaaaccgaaaaagacgagcccgattttactacttccgac
ccccagtcgtcgaaggaggccggcacctcgacttcagaggatattgagatgcgcgatgca
gatggtgaagattatgacgctaccggaaagaagggctcggagctcaagattcagttgcca
cttcctccacattccgaggaatctggtcgggatagtgagagtgatgacacacagcagagg
agctcggatggaggttatccccacgacccccgcgatgccgcgttaatacgtacaccgtcg
ctggacgagaggcagcagtggttgctacctccgctagctcccagattcgagggaaagaag
tgcttggtactggacttggacgagaccctggtacatagtagcttcaaggtcttgcaccaa
gccgattttactattcctgtagacatcgaggggagttttcacaatgtctatgttattaag
agacccggtgtagatgagttcatgaagagagttggtgaactatacgaggtcgttgtattt
acagcttctgtctcgaagtatggcgatccgttactagatcagctagatatccatcacgtc
gtccatcatcgccttttcagggatagttgcttcaacaaccagggaaattatgtgaaggat
ctatcccaacttggccgggaccttaaggatactatcatcatcgacaactcccctacaagt
tacatcttccacccacaacacgccgtgcctattagcagttggttttccgatgctcacgac
aacgagttattagatctcatccccgttctagaggatctgtcgacacaagacgttcgggat
gtaacgctggtcctggacgtatccctgtga
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integrated database retrieval system