Tuber melanosporum: GSTUM_00005090001
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Entry
GSTUM_00005090001 CDS
T01282
Name
(RefSeq) hypothetical protein
KO
K14565
nucleolar protein 58
Organism
tml
Tuber melanosporum
Pathway
tml03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
tml00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
GSTUM_00005090001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tml03009
]
GSTUM_00005090001
Ribosome biogenesis [BR:
tml03009
]
Eukaryotic type
Sno RNPs
Box C/D snoRNPs
GSTUM_00005090001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nop
NOP5NT
zf-RING_2
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-rbx1
zf-RING_UBOX
zf-RING_5
DARPP-32
zf-ANAPC11
zf-C3HC4_3
zf-RING_16
TFIIF_alpha
Nop14
Motif
Other DBs
NCBI-GeneID:
9188540
NCBI-ProteinID:
XP_002837106
INRA:
GSTUM_00005090001
UniProt:
D5G9V4
LinkDB
All DBs
AA seq
1080 aa
AA seq
DB search
MTFLILTETSAGYALFKAKDKKLLKKDDLAKEMSTPEGAASLVRLKQFSKFDSAAAALEE
VSCIVENKVSPMLSSLLNSVKDEKKASLVVADPKLGNAINKLPGLSFQIISDSSTNDLYR
AIREHLTALIPGLTPNDVSTMSLGLSHSLSRHKLKFSPDKVDTMIVQAIALLDDLDKELN
IYAMRVKEWYGWHFPEMGKIINDNLAYAKVIKAMGMRTSAATTDLAEILPEEIETALKAA
AEVSMGTEITAEDLNNITLLADQVISFTEYRQQLSSYLSARMTAIAPNLTALVGELVGAR
LIAHAGSLMNLAKSPASTVQILGAEKALFRALKTKHDTPKYGLIYHASLIGQSTGKNKGK
IARMLATKTALGLRVDALADDKDGSATLGLEMRAMIENRVRKLEGKPAVPRGNANTTSIV
SLRAPGKWEIKEAKKYNPDADTAMEDTLPAAQAVAEAAVRAIGQDIAMGDDDEESSEDGE
EAEKTEKGKNSLVPVIPTSKDDKEGESNGDDEDEEAKRKAEKKARKEAKKSKSSSKKRRK
SEGSWGAAASNTDHMSAHSLHASVLILPNPQLSSPEHLAYVPRVKKNITFAIDISANIRT
LHTGVASQGDDISGLLYVPMVNETTTCHGLSSVPTNVTHKDDLPDAIYDLIAFAPWMSRD
CSTRFLKAAQVDASVVKGFIFYLDDKAAKIPEVKDPYWHGVPFDNFEFPIYAIPGRDGIP
LLDKIAEYSGNMSEVWEAQNLTSYYDPKDFARVYMEVDTGHRNPLPGLWLFLLIVLGVLL
GIVGLTSLSMHMLQYRHLQGLRRRVANGQVDLEALGIKRLSVPRRILEKFPIRIYVPEPT
SPTIPASTYSLPVSPRPTRSISNPPRTPPPVRYFAPPDPPLPPSPTPARRRQSRDRRNDP
VHDTTLQRGYSQSQCSICLDDFIPYSTAVRELPCLHVFHPDCIDPFLETQSSLCPLCKVS
ALPRGYVPPQLTNATVRRERNLRRMRARVDAGGGVLSWWARLRFRISSSRHEEEERDLRN
TARMAVARNNPVTEISEYSRGSSRLPADSPGESHVDDEEVGENNRSRWRKAMKTLFPGFG
NT seq
3243 nt
NT seq
+upstream
nt +downstream
nt
atgaccttcctaattctcactgagactagtgctggctacgcccttttcaaagcgaaggac
aagaaacttctcaagaaagatgacctggctaaagagatgagcacccccgagggcgctgct
agtttagtgaggttgaaacaattttcaaaattcgatagtgcggcagctgctctggaggag
gtatcatgcattgtggagaataaggtgtctcctatgctctctagtctattaaactcggtc
aaggatgaaaaaaaggcatctctcgttgttgctgatccaaaattgggaaatgccatcaac
aaacttcctggattgtcgtttcaaattatctcggattcctctaccaatgacctatatcga
gcaatacgcgagcaccttacggcattgattccaggcttgactcctaacgatgtttctact
atgtcattaggtctatcacattccctgtcgcggcacaagctcaagttcagtcctgacaag
gtcgataccatgatcgtgcaagcaatcgcacttctcgatgaccttgacaaggagcttaac
atttacgcaatgcgcgtcaaggagtggtatgggtggcatttccctgagatggggaaaatt
atcaacgataaccttgcctatgccaaggttatcaaggctatgggcatgagaacctctgcc
gctacaacagatcttgcggaaatccttccggaggagatcgaaactgccctcaaggcagca
gcagaagtttcaatggggaccgaaatcacagctgaggatctcaacaatatcacactactc
gcagaccaggttatttcctttacagagtacaggcaacagctttcctcttacctctccgct
cgcatgaccgccattgctcccaacctcacggccctcgttggtgaacttgtcggcgcccgt
cttattgcccatgcgggttctctcatgaaccttgccaagtctcctgcttcaactgtccag
attctcggtgctgaaaaggctcttttcagggctctcaagactaaacacgatactcccaag
tacggattgatttaccacgcatccctcattgggcaatcaaccggaaagaacaagggaaaa
attgctcgcatgcttgctaccaagacggccctcggtttgagagttgacgctctagccgac
gataaggatggatcggcgactttaggcttggagatgagagccatgattgagaacagagtt
cgaaaactcgagggcaagccggctgttcctcgtggcaacgccaacacaacatccatcgtc
agtttgagagcacctgggaagtgggagataaaggaggctaaaaagtacaaccccgatgcg
gacactgccatggaggatacactgccggccgctcaagcggtagccgaggccgctgtaagg
gctatcggccaagatattgccatgggcgacgacgacgaagaatcatccgaggatggtgag
gaggcggagaagaccgagaagggaaagaacagtctcgtacctgttattcccacatccaag
gatgacaaagaaggggaaagtaatggggacgacgaagatgaggaagcaaagaggaaggct
gagaagaaagccaggaaagaagctaaaaagtccaagtcgtccagcaagaagagacgaaag
agtgaaggctcgtggggggcagccgctagcaatacagaccatatgtctgcacatagtctc
cacgcgtctgtgcttatcctccctaatccccaattatcgagcccggaacaccttgcttat
gtaccccgagtgaagaaaaacattactttcgctatcgatatctctgccaacatccgaacc
cttcacacgggcgtcgcttcgcagggtgatgacatctccggcttgctctatgtgcctatg
gtaaatgagaccacgacatgccatggcctctcttctgtccctaccaacgttacacacaag
gatgaccttccggatgccatctacgatttgattgcttttgcgccttggatgtcgagagac
tgtagtactagatttttgaaggccgcccaggtggacgcaagtgttgttaaaggatttata
ttttatctcgatgataaagctgcgaagattcccgaggtgaaggatccttattggcatggt
gttccattcgataatttcgagttcccaatctatgccatccctgggagagatggcataccc
ctgttggacaagattgccgaatattccgggaatatgtcggaggtttgggaggcccaaaat
ctaacgtcctactatgatccaaaggattttgccagggtttatatggaggtagatacaggc
catcggaacccgttaccaggactctggttgttcctactgatagttctcggcgtgcttctt
ggcattgtgggattaacgtctcttagcatgcatatgcttcaataccgacatctgcaggga
cttcgccgtcgagttgcaaacggacaggtcgacctcgaagcattaggcataaagcgactc
tctgtcccacgacgaattctggaaaagttcccaattcgaatatatgttcctgaaccaaca
tctcctactattcccgcatccacctattccttgccggtatcccctcgacctacccgatct
atttctaatcctccaagaactcccccacccgttagatattttgcccctcccgatccacct
ttaccaccttcacctacgcctgcgagacgacgtcaaagccgggaccgacgtaatgaccct
gtgcatgatacaactctccaacgtggttattctcaatcacaatgctccatctgcttagac
gactttattccgtattccacagctgtccgtgaattaccttgtcttcatgtcttccatcct
gattgcatcgacccatttctcgaaacccaatcttctctatgcccattgtgcaaggtttca
gcgttacccagaggctatgtcccgcctcagctgaccaatgccacggtgcgacgagagcgg
aaccttcggcggatgcgggctcgagtggatgccggtggcggcgttttgtcttggtgggcc
agacttaggttccgcataagttcaagtaggcatgaggaggaagagcgtgatctccgaaat
actgcgagaatggcggtagcgcgaaacaatccggtgacggaaataagcgaatacagtaga
ggatcaagccgattgcccgcggatagcccgggggagtcccacgtggatgacgaggaagtg
ggggagaataatcgttccaggtggagaaaagctatgaagacattgtttcctggctttggg
tag
DBGET
integrated database retrieval system