KEGG   Tuber melanosporum: GSTUM_00005146001
Entry
GSTUM_00005146001 CDS       T01282                                 
Name
(RefSeq) hypothetical protein
  KO
K12882  nuclear cap-binding protein subunit 1
Organism
tml  Tuber melanosporum
Pathway
tml03013  Nucleocytoplasmic transport
tml03015  mRNA surveillance pathway
tml03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:tml00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    GSTUM_00005146001
  09122 Translation
   03013 Nucleocytoplasmic transport
    GSTUM_00005146001
   03015 mRNA surveillance pathway
    GSTUM_00005146001
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tml03019]
    GSTUM_00005146001
   03041 Spliceosome [BR:tml03041]
    GSTUM_00005146001
Messenger RNA biogenesis [BR:tml03019]
 Eukaryotic type
  mRNA processing factors
   5' end processing
    Cap binding complex
     GSTUM_00005146001
Spliceosome [BR:tml03041]
 Common components
  Common spliceosomal components
   Cap binding complex
    GSTUM_00005146001
SSDB
Motif
Pfam: MIF4G_like MIF4G_like_2 MIF4G
Other DBs
NCBI-GeneID: 9185695
NCBI-ProteinID: XP_002837222
INRA: GSTUM_00005146001
UniProt: D5GA59
LinkDB
AA seq 813 aa
MGDYYRGREEGRGGGRGGGPRRSQKRRHRDDDDDDKEYRRSRPYEREDPASRLRRDTISI
AESPLTKIEETINLIANTFASNCDSEELRNTFLNTLLSLVVEQPFKIPFLTAAVLVINSR
NAEAGKLILDEFGKAAQAYLTEGFLTSAKLVLRFLAGLQGMVEGEGLYFVLGGIVDQAAG
YLAAEEVGLALDLVWITLITVPYILASSRSDNSLASELLKKTSSITEVKHRMQSLLSPFT
GGYAPYDARAQGTHNARILQLNLEACLGSEPSRPFHGVGCLPRPYESFLQELEGATKHPM
PEITLPSDYPVDKSAIMPHVYFSVFADPNVETVPPPLELASTLFRDAIVDTIDTLDCNRL
VVSRFLIEIDCYFSPNAFIKRAVPFDRVIETAGPEGSTWKPEDVAVDAIFSQLYKLPGPN
HKLVYYHSILTELCKLAPAAVAPSLGRAIRFMYKNLESMDTELIYRFVDWFSHHLSNFGF
TWKWAEWNENLTLPDVHPKKAFILGALEKEIRLSFATRIKGTIPAPYKELISEAKEKEQP
HFKYDSEDEPFCKEAKEVLHAVADKKEDAEVDAILAKIVELAKESGVADPLFVARDAYVT
AICHIGAKSLSHVLSCIERCKEKLLAIGNESPDARRQIVGSVLSYWEDQPGIGANVVDKL
LNYSIVTPLSVVEWVLHDAGNKALSHTHAWEMVSTTINKVNTRVRQMVAARRVMSINDYT
EEQLAVYAQTLNAAEIEQGVLLNAVTDALTAMSDSSDEMNGGIDVESKAWMQWWAKGWLR
AFSRKFGVAEGTVVEQPVGGPSARLDPEDMDTM
NT seq 2442 nt   +upstreamnt  +downstreamnt
atgggcgattactaccgtggaagagaagaaggtcgtggaggaggtagaggggggggtccg
agacgctctcagaagagacgtcacagagacgatgacgatgatgataaagaatatcgacgc
tcacgtccgtatgagagggaggatccagcctctagattgcgaagggacaccatttcaatc
gcagaatctcctctgaccaaaattgaggaaaccatcaacctaattgcaaatactttcgcc
tcaaattgcgatagtgaggagctccgcaatactttcctcaataccttgctctctctggtt
gttgagcaacctttcaaaattcctttccttacggctgctgttcttgtcatcaattcacgg
aatgccgaagctgggaagttgatcctcgatgaatttgggaaggctgcacaggcatatctt
actgaaggattcctcactagtgcaaagcttgtcttgcgcttcctcgccgggcttcaggga
atggtggaaggcgagggattatactttgtgttgggcggtatagtcgatcaggctgccggt
tatcttgctgcggaagaagtgggactggccctggacctggtgtggattacattaataact
gttccctacattctcgcctcatcaagatccgacaatagcttagccagcgagcttttgaaa
aagacaagctctatcactgaggttaagcacaggatgcaatcgctgctaagtccgtttaca
ggaggatatgccccctacgatgcgagggcccaaggaacccataatgcccggatacttcaa
ttgaatttggaagcatgcttggggagtgagccaagtaggcccttccatggtgtaggctgc
ttgccaaggccatatgaatcttttctccaggaactggagggagccaccaaacatcccatg
cccgaaatcacgttaccatccgactatccagtcgacaaaagtgccatcatgccccatgtc
tacttctctgtatttgcggacccaaatgttgagactgttcccccacccctagaacttgct
tcaacgctgttccgcgatgcgattgttgacacaatcgatacgctagactgtaatcgtctt
gtggtatcccggtttttaattgaaattgattgctacttctcacctaatgcttttataaaa
cgggctgttcctttcgacagagttattgagacggcaggccccgaggggtccacatggaaa
ccggaggacgtagctgtggatgccatctttagccaactctacaagctccccgggccgaat
cacaagttggtttattatcactctatccttacggagctttgcaagcttgcgcctgcagct
gtggcaccctctttgggtagagcaattagattcatgtataagaaccttgaatccatggat
actgaactaatctatcgattcgtcgattggttctcccatcatcttagcaactttggattc
acctggaaatgggccgagtggaatgagaatttaactttacccgatgtccaccccaagaaa
gcattcatccttggagcacttgaaaaagaaattcgacttagttttgctacacgaattaag
ggcacaattccagctccatataaggagcttatctcggaagctaaggaaaaagaacaacca
cactttaagtatgattctgaagacgagccattctgcaaagaagccaaagaagtcctccac
gcagtagcagacaagaaggaggacgcagaagttgatgccattcttgccaaaattgtcgaa
ctagccaaggagagcggtgttgcagaccccctatttgtcgcacgtgatgcatatgttacc
gcaatctgccatattggtgcaaagtcgctatcccacgtattgagttgtatcgagcggtgc
aaggaaaagctcctagccataggaaacgaatccccggatgccagacgtcagatcgtcggc
tcggtactaagctattgggaagaccaaccaggtattggcgcaaatgtggtcgacaagctc
ctaaattactccattgtaactcccttatcagttgtcgagtgggttctccacgacgctggg
aataaggctctatcacatacccatgcctgggaaatggtttcgactacaataaacaaggtc
aatactagagtccgacagatggtcgcagcaaggcgggtgatgtctatcaatgactacaca
gaggagcagctagcggtctacgcccagaccctgaatgctgcagaaatcgagcagggggtg
ctccttaatgctgttacggacgctctgacggccatgtccgacagctcggatgagatgaat
ggtggcatagacgtcgagagcaaggcttggatgcagtggtgggccaagggctggttgcga
gcgttcagtaggaagtttggcgtcgcggaagggactgtagtagaacagccggttggcgga
ccctctgccaggcttgatccagaggatatggatactatgtga

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