Tuber melanosporum: GSTUM_00005195001
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Entry
GSTUM_00005195001 CDS
T01282
Name
(RefSeq) hypothetical protein
KO
K07739
elongator complex protein 3 (tRNA carboxymethyluridine synthase) [EC:
2.3.1.311
]
Organism
tml
Tuber melanosporum
Brite
KEGG Orthology (KO) [BR:
tml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tml03016
]
GSTUM_00005195001
Enzymes [BR:
tml01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.311 tRNA carboxymethyluridine synthase
GSTUM_00005195001
Transfer RNA biogenesis [BR:
tml03016
]
Eukaryotic type
tRNA modification factors
Elongator complex
GSTUM_00005195001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Radical_SAM_C
Radical_SAM
Acetyltransf_1
Acetyltransf_10
Acetyltransf_7
Motif
Other DBs
NCBI-GeneID:
9185733
NCBI-ProteinID:
XP_002837260
INRA:
GSTUM_00005195001
UniProt:
D5GA97
LinkDB
All DBs
AA seq
571 aa
AA seq
DB search
MPATMVALSTRPSKPNKKGVVLPSERERYIQACADIAHRLIQLHEENGGGKDVNLNALRG
QISKKHKLKTIPPLTAIIAAIPEHYKKYIVPKLIAKPIRTSSGIAIVAVMCKPHRCPHIA
YTGNICVYCPGGPDSDFEYSTQSYTGYEPTSMRAIRARYDPFEQARGRVDQLRQLGHSVD
KVEFIIMGGTFMSLPESYRDGFIASLHNALSGYTTENVDEAVRLAEQSETKCVGITIETR
PDYCLDQHLSSMLRYGCTRLEVGVQSLYEDVARDTNRGHTVKAVCETFKLAKDSGYKVVS
HMMPDLPNVGMERDLDQFREYFENPDFRTDGLKIYPTLVIRGTGLYELWRTGRYKNYTPN
ALIDLVARILALVPPWTRIYRVQRDIPMPLVTSGVENGNLRELALSRMKDFGTTCRDVRT
REVGIQEVKNKVRPDQVELIRRDYTANGGWETFLSYEDPKQDILIGLLRLRKCSDRTFRP
ELIGQPTSLVRELHVYGSAVPVHSRNPKKYQHQGYGTLLMEEAERIAREEHGSRKISVIS
GVGVRKYYAKLGYHLDGPYMSKMLDEHKDEN
NT seq
1716 nt
NT seq
+upstream
nt +downstream
nt
atgccggctaccatggtggctctgtccacccgaccttcaaaaccgaacaagaaaggcgtg
gtcctcccctccgaacgtgagcgttatatccaggcatgcgccgacattgcccatcgcttg
attcaacttcacgaagagaatggaggagggaaagatgtgaaccttaatgctctaagaggc
cagatttcgaaaaagcataaactgaagacaatcccaccgctcacagctatcattgctgct
attcccgaacactataaaaaatacattgttcccaaactcatagcaaagccaattcgtaca
agttccggaatagctatcgtggcagtcatgtgcaaacctcacagatgtcctcatattgcc
tatacaggaaatatttgtgtttattgccccggaggtccagactcagatttcgagtacagt
acgcaatcatataccggttatgaaccaacctccatgagggcaattcgtgcacgctacgat
ccttttgaacaagctagagggcgtgtggatcagctgcgacaacttgggcatagtgtagac
aaggtcgagtttattattatgggaggcacctttatgtctctcccggaaagctacagggac
gggtttattgcaagtttgcacaacgcgctttcaggatatactacggaaaacgtggatgag
gctgtccgcctagcagaacaatccgagaccaaatgtgtggggattacaatcgaaacaaga
ccagattattgcctcgatcagcacttgagctctatgctacgttatggctgcacacggctc
gaggttggggtccagagtctttacgaggacgtcgcccgagatacaaaccgtggccatacg
gtgaaagctgtatgtgagaccttcaaactggcgaaggattcgggttacaaggttgtgtcg
catatgatgccagatttacccaatgtaggcatggagagagatctggatcaatttagagag
tatttcgagaacccggatttccgaacagacggcctcaagatctatccaactcttgtcatt
cgaggcacaggtctatacgagctctggagaacaggacgatacaagaactacacccccaat
gctctcatcgacctagtcgctcgtatcctagccctcgttcctccatggacccgtatctac
cgagtccagcgcgacatcccgatgccccttgtaacttctggcgtggagaacggtaacctc
cgcgagttggccttgagcaggatgaaagacttcggaacaacctgccgtgacgtgcgtacc
cgtgaagttgggattcaggaggtgaagaacaaggtacggccagatcaagtggagctcatc
agacgagactatacggcgaacggcggatgggagacattcttgagctatgaggatccgaag
caggatatattgatcggactgttacgactacggaagtgctctgatcgaaccttcaggccc
gagctcattggtcagcctacgagcttggttagagagttgcatgtttacgggtctgcggtg
ccagtgcacagtcggaatccgaagaagtatcagcatcaggggtatggcactttactcatg
gaagaggcggaaaggattgccagagaggagcatgggagtagaaagattagtgtgatttcc
ggcgtcggggtacgaaagtactatgctaaacttggatatcacttggacggtccgtacatg
tcgaagatgctggatgagcataaggacgagaattag
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integrated database retrieval system
