Tuber melanosporum: GSTUM_00005241001
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Entry
GSTUM_00005241001 CDS
T01282
Name
(RefSeq) hypothetical protein
KO
K14856
protein SDA1
Organism
tml
Tuber melanosporum
Brite
KEGG Orthology (KO) [BR:
tml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tml03009
]
GSTUM_00005241001
Ribosome biogenesis [BR:
tml03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
GSTUM_00005241001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SDA1_HEAT
SDA1_dom
SDA1_C
Exotox-A_cataly
Motif
Other DBs
NCBI-GeneID:
9185766
NCBI-ProteinID:
XP_002837293
INRA:
GSTUM_00005241001
UniProt:
D5GAD0
LinkDB
All DBs
AA seq
761 aa
AA seq
DB search
MHCYPAFPVLSFNRQASEKFSGLNSSSPLYILLYTTIHTELHHHHNSAAMAKRKRAGLVK
LTNLPMLQNLIRRDPPSYHEEFILQYRHYESQRDIFMSQPEGNSGETFADLVGFMSQVTS
CYPDLTENFPNDLAGLLSKHHNVLHHELREKLVQSLVLLRNKDVIPSATLLQTLFPILTT
TTSKALRAQIYSTVTSDLRSSNAKIKNHKLNKAVQTVLFGLVEAGKDDAGSTAGLWAVKL
TRELWKRRVWGDARAVEIMKEASLCANSKVMGGGIRFFLGVDQEMDEQEDSDDEGVDIGR
AKHQVGINKKTNKKKRQLEKAYALLKKKEKNRNKPHPLDFSALHLLHDPQGFAEALFSKH
LSRNNKLTMEQKLLVLQLTSRLVGLHKLSVLGLYSYLLKFLTPRQRDVTQFLVCCAQASH
DLVPPDVLEPIVKKIADEFVSEGVAAEVATAGLNGIREICARAPLAMNATLLQDLTEYKG
SKDKGVMMAARGLIGLYREVAPEMLKKKDRGKAATMDMKNREDLRFGIEKEGVIEGLDLL
EQWKAEQKRLKMAAKDDDDTNRAGWEIEDDSEDNETGWINVTSDNEIEISDSEDEEEEEN
YKPKKKTKVDDEEKEVLPGETDMEEKKLSTLATTKILTPADFAKLAELKTAAGLERLMGK
KITNEDAVEVDAIKGPQRRGKSDKEARLAAVMEGREGREKFGSNKGKRDKAHSTTNKEKA
RKKNFMMMKSKAKGKQKRSLVEKQRALRAHVEKQKKSKRKG
NT seq
2286 nt
NT seq
+upstream
nt +downstream
nt
atgcattgttacccggctttcccagtgctgtcattcaaccgccaggcttcggaaaaattc
tctggactcaattcttcgtctccactatacatcctgctatacaccacaattcacaccgaa
cttcaccaccaccacaattccgctgcgatggccaaacgaaagagagccggccttgtgaag
ctcacaaatcttcctatgctccaaaacctcatccgccgcgacccgccctcctaccatgaa
gaatttatcctacaataccgacactacgagtcgcagcgcgatatcttcatgtcccagccg
gaggggaattccggcgagaccttcgcagatctagtcgggtttatgtcgcaggtgaccagc
tgctacccagaccttacagagaacttcccgaacgacttggccggactactgtcaaagcac
cacaacgtcctccaccacgaacttcgggagaaactcgtccagagtctggtgttgctcagg
aataaagacgttatcccttcggctacgcttttgcagactcttttcccgattttaacgact
acgacgagcaaagcactccgcgcacagatctactctaccgttactagtgatttgcgcagt
tcgaatgcgaagatcaagaatcacaaattgaataaggcagtgcagacggtgttgttcggg
cttgtggaggcgggtaaggacgatgctgggtctacggcgggtctgtgggcggtgaagtta
acgagagaattgtggaagagaagagtatggggtgatgcaagggctgtggagatcatgaag
gaagcgagtctctgcgccaattcgaaggttatgggcggtgggattcgtttctttctgggt
gtggatcaggagatggatgagcaggaggatagtgatgacgaaggggtagatattggaagg
gcgaagcatcaggtcgggatcaacaagaagacgaataagaagaaaaggcaattagagaag
gcgtacgctctactgaagaagaaagagaagaacaggaataagccgcatccgctggacttt
tccgctctacatttactccatgacccccagggtttcgcggaggctctgttctcaaaacat
ctttctcgtaacaataaactcacgatggaacagaagctgcttgtcctccagttgacatcc
cgcttggttggtttacataagctcagtgtgttggggttatactcctatctactaaagttt
cttaccccccgtcagcgggatgttacacaatttcttgtctgttgtgcccaagcttctcac
gaccttgttccgccagatgtattggaacccatagtcaagaagatcgcagacgagttcgtc
tcggagggtgttgcggctgaggttgctacagcaggccttaacggaattcgtgagatctgt
gcacgagctccgctggctatgaatgccacacttctccaggatcttacggagtacaagggc
tctaaagacaagggtgtcatgatggcagcgcgaggtctgatcggattatatagagaagtc
gcacctgaaatgttaaagaaaaaagacagaggcaaggcagcaaccatggatatgaagaac
agggaggatctacgcttcggaatagaaaaggagggagtaatcgaaggcttggacctcctg
gaacaatggaaagcggagcaaaaacgactcaaaatggcagcaaaagatgatgacgacaca
aaccgggcagggtgggaaattgaagatgatagtgaggataatgagacggggtggatcaac
gtaacgagcgacaacgaaatcgaaattagtgactcggaagacgaggaggaggaggagaac
tacaagccgaaaaagaaaaccaaagtcgatgatgaagagaaagaagtcttaccgggggaa
acagatatggaagagaaaaaattatcaacgctagcgactaccaaaattctcacaccggca
gactttgcaaagctagcagaattaaagacggcagcagggttggaaagactcatgggcaaa
aaaatcacaaacgaagatgccgtcgaggtagacgctatcaagggcccgcaaaggcgcggg
aaatcggataaagaggcccggctcgcggcggtcatggaaggccgtgaagggcgggagaag
ttcggctccaataaggggaaacgggacaaggcgcacagcactacgaataaggaaaaggcc
cggaaaaagaactttatgatgatgaagagcaaggcgaagggtaagcagaagaggagtttg
gtggaaaagcaacgggcactcagggcgcatgtggagaagcagaagaaatcgaagcggaag
ggatag
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