Tuber melanosporum: GSTUM_00005342001
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Entry
GSTUM_00005342001 CDS
T01282
Name
(RefSeq) hypothetical protein
KO
K12847
U4/U6.U5 tri-snRNP-associated protein 2
Organism
tml
Tuber melanosporum
Pathway
tml03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tml00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
GSTUM_00005342001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tml03041
]
GSTUM_00005342001
Spliceosome [BR:
tml03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP specific factors
GSTUM_00005342001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
zf-UBP
UVR
Motif
Other DBs
NCBI-GeneID:
9187832
NCBI-ProteinID:
XP_002837473
INRA:
GSTUM_00005342001
UniProt:
D5GAX1
LinkDB
All DBs
AA seq
550 aa
AA seq
DB search
MSKRPAEETVGALEAQRQSTGPQTPKRARLEEVIDQEFVEKGSSRNGMILEASRPRAPAP
TTDMDEDGDYEDDVAVGQLGVGKAQEGPSEGFSDLYLDTINRLLIKVDFEKLCSVSLSNI
NVYACLVCGKYFQGRGRSSHAYTHSLDQDHHVFINIASLKVYVLPESYEVQNKTLEDIKY
VVNPTYTKVDVTKLDKEPLVRWDLGGKKYIPGFVGLNNIKQNDYMNVVVHALAHVAPLKN
YFMLEDLSSRPELAQRFSILVRKIWNPRAFKSHVSPHELLQEISLRSSKRFTLTIQSDPV
DFLSWFINNLHLSLGGSKTKPGTSIIQKVFQGRLKVESQTITARADASDRLRFEEAAEIK
MDIVRFMMLTLDLPPKPIFKDEQDKNIIPQVPLTTILSKYDGLHSQELLGQRKRYRLLSP
LPPFLIFHIKRFSKNKFVEERNPTIVTFPTRSLDMSPYVEPSEGGSSTEPIWYDLVANIT
HESVTTTSGKKEGDIRSVYKVQLVNKASGEWFQIQDLFVEEVARELLFTSESYVQIWQLR
KEPKGKGTEI
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaaagaccggcagaagaaacagtgggggctctggaggctcaacggcaaagtacg
ggcccgcaaactccaaagcgtgcgcgccttgaggaggttattgaccaagagtttgtggag
aaaggctcgtcgaggaatggtatgatcttggaagcttcgcggccgagggcaccggccccc
accaccgatatggacgaagatggggattacgaggacgatgtggcggttggtcagctcggg
gtcgggaaagcgcaagagggaccttcagaggggttctcggacctgtatttggacactatt
aatcggttactaattaaagtagactttgaaaagctgtgctcagtatctctctccaacatc
aacgtctatgcttgtttagtttgcgggaaatattttcaaggtcgcggtcgttcgtcacac
gcctatacacattccttggaccaggaccatcacgttttcatcaatattgccagtttgaaa
gtatatgttttacccgagagctacgaggtccagaataagacgttagaggacatcaagtat
gttgtaaacccaacatataccaaggtggacgtaacgaagctcgacaaggaaccattggtg
cggtgggatctaggagggaagaagtatattcccggttttgtgggtttgaataacatcaaa
cagaatgattacatgaacgttgtagtgcatgctcttgcacatgtagctcctcttaagaac
tatttcatgctagaggatttatcgtcaaggcccgaactagcccaacgattctccatcttg
gtcagaaagatctggaacccccgcgctttcaaatcccatgtttccccccacgagcttctt
caggaaatttctctccgttcttccaaaagattcaccctaaccatccaatctgacccagtg
gactttctctcttggttcataaataatcttcacctttcactcggtggctcgaaaacgaag
cccgggactagtattatacaaaaggttttccaaggaaggctaaaagtcgaatcacagacc
attactgctagagcggatgcctccgatcgattacgatttgaggaggcggctgagattaag
atggatattgtaaggtttatgatgctaacattggatctaccgccaaagccgatcttcaag
gatgagcaggacaagaatatcattcctcaggtccccttaacaaccatcctgtcaaagtac
gacggcctacactcccaggagctcctcggacagcgtaaacgctaccgcctcctctccccc
ctccccccattcttaatattccacatcaaacgttttagcaagaataaatttgtagaagag
cgcaatcctactatcgtcacattccccacaagatcactagacatgtcaccctacgtcgaa
ccttcagagggcggttcctcgacagagccaatctggtacgatctagtcgccaacatcaca
catgagagtgtcaccacaacatcagggaagaaagagggcgatatcaggagtgtctataag
gtgcagttggtgaataaggctagcggagagtggttccagattcaagacttgtttgtagaa
gaggttgctagagagctgttgtttacgagtgagtcgtatgttcagatttggcagctaagg
aaggagccgaaggggaaggggacggaaatttag
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