KEGG   Tuber melanosporum: GSTUM_00005346001
Entry
GSTUM_00005346001 CDS       T01282                                 
Name
(RefSeq) hypothetical protein
  KO
K14310  nuclear pore complex protein Nup205
Organism
tml  Tuber melanosporum
Pathway
tml03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:tml00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    GSTUM_00005346001
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tml03019]
    GSTUM_00005346001
   03036 Chromosome and associated proteins [BR:tml03036]
    GSTUM_00005346001
Messenger RNA biogenesis [BR:tml03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     GSTUM_00005346001
Chromosome and associated proteins [BR:tml03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    GSTUM_00005346001
SSDB
Motif
Pfam: Nup192 NYD-SP28_assoc
Other DBs
NCBI-GeneID: 9187835
NCBI-ProteinID: XP_002837476
INRA: GSTUM_00005346001
UniProt: D5GAX4
LinkDB
AA seq 1596 aa
MDEVEAARLLLRGQKESQVLDRNAFQSAVFLFHTRRQNILESLRLILSYALNDEIDPEIR
RAAKQAANLLASPKAPAAASGSGSFAEKCISTMASVRASVQQLREKERHEQTLRLVPTPG
FKEDLEVQVRFLMNQHEALASIVFYLVKLKRAAVSDFKNLLGVVKSFEKHDIFAFHHILP
LYSFCTVLCDPDSPINFQQTVELHKYMLNEYKSAPWPLRFVQASVQIWWLSEFNGLCNDP
SSAEPPDSATLDYFTHVFGPSKAALEGGAFEFMLAVSADVSAEWYLNSAKEDLHRFLQTR
VAPLEDNKLLSVSFKSLMISQFEIFIECFISNMADLLKQMKTQEEEDVLLTQRTCGYDLE
RFYMMIHYTYLGRRNAGMAFWVDPESNLHGFIVWASTSHMPFMVATFSYMLASLALGVTA
AEHTHRFLQDEITPGSKKNRRTQYLSWEQLFKEFQKYIEQLRIRHKALVPTNSYRTPAIP
AETVAEPPPESSMMLDGYLRLIAQVAQESLASRHWLLHESPNFRIMVALFDLLALQASVQ
LWDSVFSAITAFLTEKTENLNSQVWIAIDNWALGTPAPPSNALQLGSISGKPFAQAGASE
KLDAIVTAVHPAEGFARLMATLVSPPVEDSLLKDSLPFPETLGSSTRLSGIDPYIDFIAG
TIFTNTSLQNLPPDLPLVPEKIDDPTERLTRAQYRIFRPALQSSCLEFIETCLISFNEDL
LNIASSNVAVDVAIGASSLETYAKLHPFARVMEHLLTEKCFNVLYEIIKIGVDDLASAGA
PMPVLRTILMTINILDLAMRMQSTYFEVVRPLVKRDESGMRKMNTISTGFPSIEEAILHH
LDIVVCLGLYVGSAYQDVTLAALSLLEKLSVAPKLVSIMGSSLGQQARKNRLLGAIEQSP
ESNRILFNFIQQWEADVDSEETDMRYPQKFAILKLLDSSLASQPNDFTLAHMLLGFGWDE
KEGISLSVSSGGIGSGVSLLHSLLTDVDARESDEAGLAYDGGLCRLKNDIFSVLKRLWKS
PATSTEILYVLRANKLLFSQMLSEQIVQRQTIWDGIPFESDEFFTRGAAASFCNFISRRT
SLFNYIALEIRQLSTQGASTGVSKYLSTLLGKTVLDGQSMTNLHILDLLDFLELDAPEPI
PTPKITWFNDVNLSAFYQDDPFGNPSYHLPTIDQILLLRRNELGALGVIDNSNDDSVTLE
MKALLDYLFAENQLRLFKGANLECLKAWSTLIAVMLEDCEYEPSAKTLFLLTALQSILPK
LESYCSGDIVYAQELSSLAHTLTTHLTFDSKTFGKGRASDMANDRMYQLFRISLRCIQSP
MATANLREDFYNIAYRYLKGMSDLSTQTNGLTRHNTQTIKASGDRLLEVLCNDAYAGEGQ
CKIVALLLLETLVGLAADEGSSYVVDTLMRQNFIVVIIDSLKRIGHDLRNIASKGDFPSF
FHFFILNGKLIVTDIDYLMRSFKATTGFLVRVSQTRSGSGYVINAGLFQALRESRLFAVD
PDLGVALQKYYDLLQDAMRVVTCVILSKGPQNQTAIKLGRQFITENRSVIMTVFKRHAGI
GGQRLDDIGDLGELVTLFVLLISVTAFVEGEERSLC
NT seq 4791 nt   +upstreamnt  +downstreamnt
atggacgaagttgaggctgcgcgcctgctactacgtggacagaaggaatcacaagttctt
gatcggaatgcttttcaaagcgccgtcttcctcttccacacccgccgacagaacatcctc
gagtctctacggttaatcctttcctacgcccttaacgatgagatcgatccagagatccgg
agggctgcaaagcaagctgcaaacctgttagcttctccaaaggctcccgcggctgctagt
ggttccgggtcgtttgctgagaaatgtatttccaccatggcttcagttcgggcttctgtc
cagcaattacgagagaaagaacggcatgagcagacgctacgattagtcccaactcctggg
tttaaggaggatttggaggtccaggttcggtttttaatgaaccagcacgaagcactggca
tccattgttttttacttggtcaaattgaagagggcagccgtctcagatttcaagaacctc
ttgggtgttgtcaaatccttcgagaagcacgatatatttgcattccaccatatcctaccg
ctatactctttctgtaccgtcctttgcgatccggactcgcctattaactttcagcagaca
gtagagttgcacaagtatatgcttaacgaatataagagtgcgccatggcccctcagattt
gttcaggcttcggttcagatatggtggctgagtgagttcaacggcctatgtaacgatcca
tcgtcggcagagccgcctgattccgctacattggactattttacacatgtgtttggcccg
tcgaaggctgctttagagggtggtgctttcgaatttatgctcgcggtatctgcggatgtc
agcgcagaatggtatctcaattccgcgaaggaggatcttcacaggttcttacaaacacga
gtggccccgctggaagacaacaaattgctttcagtatcattcaagtccctcatgatcagt
cagttcgaaatcttcatcgaatgcttcatctcgaatatggcagacttgttgaagcagatg
aaaacgcaagaagaggaggatgtgctattgacgcaaaggacatgcggttacgatttggag
cggttttacatgatgatacattacacatatcttggtcgacggaatgccggaatggcgttc
tgggttgacccagagagtaatttgcatgggttcattgtctgggcttcaaccagccatatg
ccattcatggttgctacattcagttatatgttggcatcactcgctcttggggtgactgcc
gccgagcacacgcatcgtttcctccaggacgagattactcctggttctaagaagaaccgg
agaacccaatacctctcctgggagcagctctttaaggaattccagaaatacatcgagcag
cttaggatacggcataaagctttggtgcctaccaattcttacagaactcccgccatacct
gccgaaactgtcgcggaacccccgcccgagtcaagtatgatgttagatgggtacctaaga
ttaatagctcaggttgcccaagaatcgctagcttctcgacattggctacttcatgagagc
cctaatttccggatcatggtcgcgttgttcgatcttttggctttacaggcttcggttcaa
ttgtgggactctgtgttctcagccatcaccgcatttctaacggagaagactgagaacctg
aattcccaagtgtggattgccatcgataattgggcactcggtacacctgctccaccatca
aatgccctacaactcggttccatatcagggaagccattcgctcaggctggagcttcggag
aaactggatgccattgtgacagcggtacacccagctgagggatttgcccgactgatggca
acattagtctccccacccgtggaggattctcttcttaaggattccctcccattcccggag
accctcggcagctccacacgtctttccgggattgacccgtatatcgacttcattgccgga
accattttcaccaacacgagtctccaaaacctccccccagatcttcctctcgtccccgag
aagatcgatgacccgacagagagactcacccgtgctcaatacaggattttccggccagct
ctgcaatctagctgccttgagttcattgaaacctgcctcataagctttaatgaggattta
ttgaacatcgctagttctaatgttgccgtcgatgttgctattggagcatcctctttggaa
acatatgctaagttgcacccattcgcacgggtcatggagcatcttctgacggagaaatgt
ttcaacgtgctttacgagattataaaaattggagtcgatgatctcgcgtctgcgggtgcg
cccatgccagtcttacgaactattttgatgacaatcaacatccttgatcttgctatgagg
atgcaatcgacctatttcgaagtcgttcgtcctctggtcaaacgggatgaaagtgggatg
agaaaaatgaatactatctcgactgggtttccttctatcgaagaagcaatcctgcatcac
ttagatattgttgtctgccttggcttgtatgttggaagcgcatatcaagacgtaactttg
gctgctctaagtcttttggagaagctttccgtagcaccgaagctagtatcaatcatgggc
tcttcattggggcaacaggcacgcaaaaaccgcctccttggtgccattgaacagagtcct
gaatcgaatcgaatattattcaacttcatccaacaatgggaagcagatgtggacagcgaa
gagacggatatgcgatacccgcagaaattcgccattttgaagctgttggatagtagtttg
gcgtcgcaaccgaatgactttactcttgcgcatatgcttcttggatttggttgggatgag
aaagagggcattagtcttagtgtgtcctcgggtggaatcggatctggcgtctcactcttg
cacagccttctcacagatgtagatgcacgcgagtctgatgaagcaggtctggcatatgat
gggggtctttgccgcttgaagaatgacatattttcggttctcaaaagactctggaaatca
ccggccacctccactgagattctatatgttcttcgtgccaacaagttgctattttctcag
atgctttcagaacagattgtccagagacaaacaatttgggatgggatcccatttgaatcg
gacgagttcttcacgaggggcgctgctgcgagcttctgcaatttcattagcagacgcact
tctttgttcaattatattgctctcgaaattcggcaactgtcgacgcaaggggcatcgacg
ggagtctcaaagtatctctcaacattgttgggaaagacggtactggatggccaatccatg
acgaatcttcatattctagatctcctagatttcctagaacttgatgcgccagaacctatc
ccaacgcctaagattacttggttcaacgacgttaatctctccgcgttctaccaggacgac
ccattcggcaacccatcataccacctaccaactattgaccagattctgctactaagacgg
aatgagctaggtgccctaggagtcatcgataactcgaacgatgattccgtgacccttgaa
atgaaggcattgctagactatctctttgcggagaatcaactacgactattcaagggagcc
aatctagaatgcttaaaagcctggagcacactcatcgcagtaatgctagaggattgcgaa
tatgaaccttcggcaaagactctattcttgctcacagctctccaatccattctgccgaag
ctcgagtcatactgcagcggtgatattgtctacgcccaggagctcagctctcttgcgcat
acgcttaccactcaccttaccttcgacagtaaaacattcgggaaaggacgggcttccgac
atggcgaatgacaggatgtatcaactattcaggatctccctacgatgcattcagtcccct
atggccacggcaaacctccgcgaggacttctacaacatcgcttatagatacttgaaggga
atgtccgacctgtctacccaaaccaatggtctgactcgccacaatacacagacgatcaag
gcctccggggacagacttctcgaggtgctctgcaatgacgcttacgccggagaaggacaa
tgtaagattgtcgcattactgctcctagaaactctagtcggacttgcagcggatgaggga
tcaagctatgttgtcgacaccttgatgaggcaaaactttattgttgtcatcatagactcg
ttaaagcggattggacacgatttacggaatatagctagcaaaggtgatttcccatccttt
tttcatttttttatcctgaacgggaaactaatagtcacagatatcgactacctaatgcgc
tccttcaaagcaacaaccggcttcctcgtgcgcgtctcccaaacgcgtagcggctcgggc
tacgtcataaacgccggcctcttccaagctcttcgagaaagtcgtctattcgccgtcgac
ccagaccttggcgtcgccctccaaaaatactacgacctcctacaagatgcgatgcgcgtc
gtaacatgcgtcatcctgtccaagggcccgcagaaccaaacagctatcaagctggggcgt
caattcatcacggagaaccgcagcgtcatcatgaccgtgttcaagcggcatgcggggatc
gggggccagcgcttggatgacattggcgacttgggggaattggttacgctttttgtgctg
ttgatttcggtgactgcgttcgtggagggggaggagaggagtttgtgttag

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