Tuber melanosporum: GSTUM_00005346001
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Entry
GSTUM_00005346001 CDS
T01282
Name
(RefSeq) hypothetical protein
KO
K14310
nuclear pore complex protein Nup205
Organism
tml
Tuber melanosporum
Pathway
tml03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
tml00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
GSTUM_00005346001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tml03019
]
GSTUM_00005346001
03036 Chromosome and associated proteins [BR:
tml03036
]
GSTUM_00005346001
Messenger RNA biogenesis [BR:
tml03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
GSTUM_00005346001
Chromosome and associated proteins [BR:
tml03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
GSTUM_00005346001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup192
NYD-SP28_assoc
Motif
Other DBs
NCBI-GeneID:
9187835
NCBI-ProteinID:
XP_002837476
INRA:
GSTUM_00005346001
UniProt:
D5GAX4
LinkDB
All DBs
AA seq
1596 aa
AA seq
DB search
MDEVEAARLLLRGQKESQVLDRNAFQSAVFLFHTRRQNILESLRLILSYALNDEIDPEIR
RAAKQAANLLASPKAPAAASGSGSFAEKCISTMASVRASVQQLREKERHEQTLRLVPTPG
FKEDLEVQVRFLMNQHEALASIVFYLVKLKRAAVSDFKNLLGVVKSFEKHDIFAFHHILP
LYSFCTVLCDPDSPINFQQTVELHKYMLNEYKSAPWPLRFVQASVQIWWLSEFNGLCNDP
SSAEPPDSATLDYFTHVFGPSKAALEGGAFEFMLAVSADVSAEWYLNSAKEDLHRFLQTR
VAPLEDNKLLSVSFKSLMISQFEIFIECFISNMADLLKQMKTQEEEDVLLTQRTCGYDLE
RFYMMIHYTYLGRRNAGMAFWVDPESNLHGFIVWASTSHMPFMVATFSYMLASLALGVTA
AEHTHRFLQDEITPGSKKNRRTQYLSWEQLFKEFQKYIEQLRIRHKALVPTNSYRTPAIP
AETVAEPPPESSMMLDGYLRLIAQVAQESLASRHWLLHESPNFRIMVALFDLLALQASVQ
LWDSVFSAITAFLTEKTENLNSQVWIAIDNWALGTPAPPSNALQLGSISGKPFAQAGASE
KLDAIVTAVHPAEGFARLMATLVSPPVEDSLLKDSLPFPETLGSSTRLSGIDPYIDFIAG
TIFTNTSLQNLPPDLPLVPEKIDDPTERLTRAQYRIFRPALQSSCLEFIETCLISFNEDL
LNIASSNVAVDVAIGASSLETYAKLHPFARVMEHLLTEKCFNVLYEIIKIGVDDLASAGA
PMPVLRTILMTINILDLAMRMQSTYFEVVRPLVKRDESGMRKMNTISTGFPSIEEAILHH
LDIVVCLGLYVGSAYQDVTLAALSLLEKLSVAPKLVSIMGSSLGQQARKNRLLGAIEQSP
ESNRILFNFIQQWEADVDSEETDMRYPQKFAILKLLDSSLASQPNDFTLAHMLLGFGWDE
KEGISLSVSSGGIGSGVSLLHSLLTDVDARESDEAGLAYDGGLCRLKNDIFSVLKRLWKS
PATSTEILYVLRANKLLFSQMLSEQIVQRQTIWDGIPFESDEFFTRGAAASFCNFISRRT
SLFNYIALEIRQLSTQGASTGVSKYLSTLLGKTVLDGQSMTNLHILDLLDFLELDAPEPI
PTPKITWFNDVNLSAFYQDDPFGNPSYHLPTIDQILLLRRNELGALGVIDNSNDDSVTLE
MKALLDYLFAENQLRLFKGANLECLKAWSTLIAVMLEDCEYEPSAKTLFLLTALQSILPK
LESYCSGDIVYAQELSSLAHTLTTHLTFDSKTFGKGRASDMANDRMYQLFRISLRCIQSP
MATANLREDFYNIAYRYLKGMSDLSTQTNGLTRHNTQTIKASGDRLLEVLCNDAYAGEGQ
CKIVALLLLETLVGLAADEGSSYVVDTLMRQNFIVVIIDSLKRIGHDLRNIASKGDFPSF
FHFFILNGKLIVTDIDYLMRSFKATTGFLVRVSQTRSGSGYVINAGLFQALRESRLFAVD
PDLGVALQKYYDLLQDAMRVVTCVILSKGPQNQTAIKLGRQFITENRSVIMTVFKRHAGI
GGQRLDDIGDLGELVTLFVLLISVTAFVEGEERSLC
NT seq
4791 nt
NT seq
+upstream
nt +downstream
nt
atggacgaagttgaggctgcgcgcctgctactacgtggacagaaggaatcacaagttctt
gatcggaatgcttttcaaagcgccgtcttcctcttccacacccgccgacagaacatcctc
gagtctctacggttaatcctttcctacgcccttaacgatgagatcgatccagagatccgg
agggctgcaaagcaagctgcaaacctgttagcttctccaaaggctcccgcggctgctagt
ggttccgggtcgtttgctgagaaatgtatttccaccatggcttcagttcgggcttctgtc
cagcaattacgagagaaagaacggcatgagcagacgctacgattagtcccaactcctggg
tttaaggaggatttggaggtccaggttcggtttttaatgaaccagcacgaagcactggca
tccattgttttttacttggtcaaattgaagagggcagccgtctcagatttcaagaacctc
ttgggtgttgtcaaatccttcgagaagcacgatatatttgcattccaccatatcctaccg
ctatactctttctgtaccgtcctttgcgatccggactcgcctattaactttcagcagaca
gtagagttgcacaagtatatgcttaacgaatataagagtgcgccatggcccctcagattt
gttcaggcttcggttcagatatggtggctgagtgagttcaacggcctatgtaacgatcca
tcgtcggcagagccgcctgattccgctacattggactattttacacatgtgtttggcccg
tcgaaggctgctttagagggtggtgctttcgaatttatgctcgcggtatctgcggatgtc
agcgcagaatggtatctcaattccgcgaaggaggatcttcacaggttcttacaaacacga
gtggccccgctggaagacaacaaattgctttcagtatcattcaagtccctcatgatcagt
cagttcgaaatcttcatcgaatgcttcatctcgaatatggcagacttgttgaagcagatg
aaaacgcaagaagaggaggatgtgctattgacgcaaaggacatgcggttacgatttggag
cggttttacatgatgatacattacacatatcttggtcgacggaatgccggaatggcgttc
tgggttgacccagagagtaatttgcatgggttcattgtctgggcttcaaccagccatatg
ccattcatggttgctacattcagttatatgttggcatcactcgctcttggggtgactgcc
gccgagcacacgcatcgtttcctccaggacgagattactcctggttctaagaagaaccgg
agaacccaatacctctcctgggagcagctctttaaggaattccagaaatacatcgagcag
cttaggatacggcataaagctttggtgcctaccaattcttacagaactcccgccatacct
gccgaaactgtcgcggaacccccgcccgagtcaagtatgatgttagatgggtacctaaga
ttaatagctcaggttgcccaagaatcgctagcttctcgacattggctacttcatgagagc
cctaatttccggatcatggtcgcgttgttcgatcttttggctttacaggcttcggttcaa
ttgtgggactctgtgttctcagccatcaccgcatttctaacggagaagactgagaacctg
aattcccaagtgtggattgccatcgataattgggcactcggtacacctgctccaccatca
aatgccctacaactcggttccatatcagggaagccattcgctcaggctggagcttcggag
aaactggatgccattgtgacagcggtacacccagctgagggatttgcccgactgatggca
acattagtctccccacccgtggaggattctcttcttaaggattccctcccattcccggag
accctcggcagctccacacgtctttccgggattgacccgtatatcgacttcattgccgga
accattttcaccaacacgagtctccaaaacctccccccagatcttcctctcgtccccgag
aagatcgatgacccgacagagagactcacccgtgctcaatacaggattttccggccagct
ctgcaatctagctgccttgagttcattgaaacctgcctcataagctttaatgaggattta
ttgaacatcgctagttctaatgttgccgtcgatgttgctattggagcatcctctttggaa
acatatgctaagttgcacccattcgcacgggtcatggagcatcttctgacggagaaatgt
ttcaacgtgctttacgagattataaaaattggagtcgatgatctcgcgtctgcgggtgcg
cccatgccagtcttacgaactattttgatgacaatcaacatccttgatcttgctatgagg
atgcaatcgacctatttcgaagtcgttcgtcctctggtcaaacgggatgaaagtgggatg
agaaaaatgaatactatctcgactgggtttccttctatcgaagaagcaatcctgcatcac
ttagatattgttgtctgccttggcttgtatgttggaagcgcatatcaagacgtaactttg
gctgctctaagtcttttggagaagctttccgtagcaccgaagctagtatcaatcatgggc
tcttcattggggcaacaggcacgcaaaaaccgcctccttggtgccattgaacagagtcct
gaatcgaatcgaatattattcaacttcatccaacaatgggaagcagatgtggacagcgaa
gagacggatatgcgatacccgcagaaattcgccattttgaagctgttggatagtagtttg
gcgtcgcaaccgaatgactttactcttgcgcatatgcttcttggatttggttgggatgag
aaagagggcattagtcttagtgtgtcctcgggtggaatcggatctggcgtctcactcttg
cacagccttctcacagatgtagatgcacgcgagtctgatgaagcaggtctggcatatgat
gggggtctttgccgcttgaagaatgacatattttcggttctcaaaagactctggaaatca
ccggccacctccactgagattctatatgttcttcgtgccaacaagttgctattttctcag
atgctttcagaacagattgtccagagacaaacaatttgggatgggatcccatttgaatcg
gacgagttcttcacgaggggcgctgctgcgagcttctgcaatttcattagcagacgcact
tctttgttcaattatattgctctcgaaattcggcaactgtcgacgcaaggggcatcgacg
ggagtctcaaagtatctctcaacattgttgggaaagacggtactggatggccaatccatg
acgaatcttcatattctagatctcctagatttcctagaacttgatgcgccagaacctatc
ccaacgcctaagattacttggttcaacgacgttaatctctccgcgttctaccaggacgac
ccattcggcaacccatcataccacctaccaactattgaccagattctgctactaagacgg
aatgagctaggtgccctaggagtcatcgataactcgaacgatgattccgtgacccttgaa
atgaaggcattgctagactatctctttgcggagaatcaactacgactattcaagggagcc
aatctagaatgcttaaaagcctggagcacactcatcgcagtaatgctagaggattgcgaa
tatgaaccttcggcaaagactctattcttgctcacagctctccaatccattctgccgaag
ctcgagtcatactgcagcggtgatattgtctacgcccaggagctcagctctcttgcgcat
acgcttaccactcaccttaccttcgacagtaaaacattcgggaaaggacgggcttccgac
atggcgaatgacaggatgtatcaactattcaggatctccctacgatgcattcagtcccct
atggccacggcaaacctccgcgaggacttctacaacatcgcttatagatacttgaaggga
atgtccgacctgtctacccaaaccaatggtctgactcgccacaatacacagacgatcaag
gcctccggggacagacttctcgaggtgctctgcaatgacgcttacgccggagaaggacaa
tgtaagattgtcgcattactgctcctagaaactctagtcggacttgcagcggatgaggga
tcaagctatgttgtcgacaccttgatgaggcaaaactttattgttgtcatcatagactcg
ttaaagcggattggacacgatttacggaatatagctagcaaaggtgatttcccatccttt
tttcatttttttatcctgaacgggaaactaatagtcacagatatcgactacctaatgcgc
tccttcaaagcaacaaccggcttcctcgtgcgcgtctcccaaacgcgtagcggctcgggc
tacgtcataaacgccggcctcttccaagctcttcgagaaagtcgtctattcgccgtcgac
ccagaccttggcgtcgccctccaaaaatactacgacctcctacaagatgcgatgcgcgtc
gtaacatgcgtcatcctgtccaagggcccgcagaaccaaacagctatcaagctggggcgt
caattcatcacggagaaccgcagcgtcatcatgaccgtgttcaagcggcatgcggggatc
gggggccagcgcttggatgacattggcgacttgggggaattggttacgctttttgtgctg
ttgatttcggtgactgcgttcgtggagggggaggagaggagtttgtgttag
DBGET
integrated database retrieval system