Tuber melanosporum: GSTUM_00005362001
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Entry
GSTUM_00005362001 CDS
T01282
Name
(RefSeq) hypothetical protein
KO
K03253
translation initiation factor 3 subunit B
Organism
tml
Tuber melanosporum
Brite
KEGG Orthology (KO) [BR:
tml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tml03019
]
GSTUM_00005362001
03012 Translation factors [BR:
tml03012
]
GSTUM_00005362001
Messenger RNA biogenesis [BR:
tml03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
GSTUM_00005362001
Translation factors [BR:
tml03012
]
Eukaryotic type
Initiation factors
eIF-3
GSTUM_00005362001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
eIF2A
WD40_WDHD1_1st
RRM_1
Beta-prop_WDR35_TULP_N
WD40_Prp19
WD40_MABP1-WDR62_1st
Motif
Other DBs
NCBI-GeneID:
9187847
NCBI-ProteinID:
XP_002837488
INRA:
GSTUM_00005362001
UniProt:
D5GAY6
LinkDB
All DBs
AA seq
718 aa
AA seq
DB search
MAPRREDEHEDDEEIDFTDLRERYEVQLDEGLDTFVVVDGCPKVPADSRPKLIKLDTNTT
EGYAFVEYNTPDQALLACKQLNGMALDRKHTVSINKLTDIEHFGREGRIKEEYVEPEIEP
FAEQEHLRSWLSDINSRDQFIMYRSENVGVFWNKKKDVPEPVIDRAGWTESFVQWSPQGT
FLTSVHGQGVQLWGGASWKRIMRFAHPIVNLVDFSPNEKYLVTWSNKPISIPENPPPNFP
LGPDEDGKSFIIWDIKTGNLLRSFTSVEVTGDRDAELFEKSRKKVSWPVFKWSSDDKYVA
RVVPEQSIQVFETPSMLLLGKKAIKIEGVVDFEWSPSIPTAEKGKKEPEQLLCYWTPEMN
NQTARVGLMSIPSKEIIRTRNLVNVSDCKLHWQSEGKYLCVKVDRHTKTKKSMYTSLEFF
RVKEKNIPVEIVELKQVVINFAWEPKGDRFVFITVDEAIQGAQVAPKTSVHFYAPEKIKN
GVGEFCLVKTVEKKNSNAIYWSPKGRFALIATVHSQQSFDLEFWDFDFEGEKQKQDKASK
NKDLAANLMLMGTSEHYGLTDVEWDPTGRYVATSASMWKHAMENGYHLWDFKGYLLREEH
IDKFKQFLWRPRPPTMLSKEEQKQIRKNLREYSKQFDEEDQFEADVANKEVLEARKRQLD
EWRAWRARIEKEVRWERVDLGLPEDPEEALREAAGEEEDKVVEEIIEEVISEHEEEIA
NT seq
2157 nt
NT seq
+upstream
nt +downstream
nt
atggcaccccgccgtgaagatgagcatgaggacgacgaagagattgatttcactgatctc
agagagcggtacgaggttcagctcgatgaaggacttgataccttcgttgttgtcgatgga
tgcccgaaggttccggctgatagtagaccgaaactgatcaagttggacacgaacacgacc
gaaggatacgccttcgttgaatacaatacccccgaccaggccttgttagcttgcaagcag
ctcaatggaatggccctcgatagaaagcataccgtttctatcaacaaacttactgatatc
gaacactttgggcgagaagggcgtatcaaggaggagtatgttgaacctgagattgagcct
ttcgccgaacaagaacacctacgctcctggctcagtgatatcaactcccgcgaccagttt
atcatgtaccgcagtgaaaacgttggagtcttctggaataagaagaaggatgtaccggag
cctgtaattgatcgtgcaggatggacagagtcatttgttcaatggtcaccacagggcacc
ttcctaacatctgttcacggtcagggtgtgcagctatggggcggcgcaagctggaagaga
atcatgcgcttcgcccacccaatagtcaacttggtagacttctcgccgaacgaaaaatac
ctagttacgtggtctaacaagcctatctccatccccgagaatccacccccaaatttccct
ctaggacctgacgaagatggaaagagctttattatctgggatatcaagaccggtaacctc
ttgcgatccttcacctctgttgaggtgactggtgaccgtgatgccgaattgttcgagaaa
tcccgtaagaaagtttcgtggccggtgtttaaatggtcctcggacgacaagtacgttgct
cgggttgtgcctgagcagtccattcaggttttcgaaactccaagcatgctattgcttgga
aagaaagccatcaagatcgagggtgttgtcgatttcgagtggtcgccatctattcccact
gccgagaaaggcaaaaaggaaccagagcagttgctttgctactggactcctgagatgaac
aatcaaactgcacgtgttggtctaatgagcattccttcaaaggaaatcatccgaacacga
aatcttgtcaatgtgtcagactgcaagctccattggcagtcagaggggaaatacctttgc
gtcaaggttgaccgacacacaaaaaccaagaaatccatgtacacctccctggagttcttc
cgtgtcaaagaaaagaacattcctgtcgagattgtcgaactaaaacaagttgtcatcaac
ttcgcctgggagcctaagggtgatagatttgtcttcattaccgtcgacgaggctattcag
ggagctcaggttgcacccaagacctcggtccacttctatgcaccggagaaaatcaagaat
ggtgtcggcgaattttgtttagtcaagacggttgaaaagaagaactcaaacgccatctac
tggtcaccaaagggtcgcttcgccctcattgccactgttcactctcagcagagctttgat
ctcgagttttgggatttcgactttgagggcgagaagcagaaacaggacaaggctagtaag
aataaggatcttgctgccaacctcatgcttatgggtacatccgagcactatggtctgact
gatgttgaatgggaccctactggccgatacgtcgccactagtgcgagcatgtggaaacac
gcgatggaaaatggctatcacctctgggacttcaagggctatcttctccgcgaagaacac
attgacaaattcaagcagtttttatggcgtccccgccctcctaccatgctctccaaggaa
gagcagaagcaaatccgcaaaaatctccgtgagtacagcaaacaatttgacgaagaggat
caattcgaagcggatgtcgcaaacaaggaagttcttgaagctcgcaagagacagctcgat
gaatggcgtgcctggagagcaagaattgagaaggaggtcagatgggagcgtgtcgacctc
ggccttcccgaggacccagaggaagccctcagggaagctgccggcgaggaggaggacaag
gttgtcgaggagattatcgaggaggtcatctctgagcacgaggaggagattgcgtaa
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integrated database retrieval system
