Tuber melanosporum: GSTUM_00005373001
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Entry
GSTUM_00005373001 CDS
T01282
Name
(RefSeq) hypothetical protein
KO
K14376
poly(A) polymerase [EC:
2.7.7.19
]
Organism
tml
Tuber melanosporum
Pathway
tml03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
tml00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
GSTUM_00005373001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tml03019
]
GSTUM_00005373001
Enzymes [BR:
tml01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
GSTUM_00005373001
Messenger RNA biogenesis [BR:
tml03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Poly(A) addition factors
GSTUM_00005373001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAP_NTPase
PAP_central
PAP_RNA-bind
NTP_transf_2
MTPAP-like_central
UQCC3
Motif
Other DBs
NCBI-GeneID:
9187856
NCBI-ProteinID:
XP_002837497
INRA:
GSTUM_00005373001
UniProt:
D5GAZ5
LinkDB
All DBs
AA seq
587 aa
AA seq
DB search
MTEPARQQYGVTPPISVATPTDKEVERNQALIEELKKQGSFEGAEESQKRVLVLNTLQNL
TEGFVKKVCANKGMPEHIIKNSGGKIFTYGSYRLGVYAPGSDIDTLLVTPAHITRHDFFA
TLPAMLQELVPPPEDLSMVPDAFVPIIKFKLQSISIDLIFARLANVNSVPKDMALSDKEL
LRGCDEVNLRCLNGTRVTDEILTLVPKPGVFRMALRGIKLWAQRRAIYANVMGFPGGVAW
AMLVARICQLYPMAVSAVVISKFFKILAHWTWPQPVLLKGIEDGPLSVRVWNPKIYPSDR
GHLMPIITPAYPSMCATHNITKSTKSIIIREMKHAAEIMDGIMVGNLSWDKLFERHSFFT
NGYRYYLSVVAAAKDKDTLLGWSGLVESKLRHLVMKLEILETIKLAHPFNKGFDNVHFCE
TEEEAIRIANGEIKAIDNQVGVKTVVTDLKAEQNGDVEKKEDESKFKVYTTTYYVGLEIN
TEISKHIDISWASQEFFETCKTWPSYNEDEHTIHINLARNFELPDNVFQPGETKPVKKTK
KKIIKRKAGTANGGSATKKRSADEASINDDTKRARQTSVHQQQPAQA
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atgactgaaccagcgcgccaacagtatggtgttacaccaccgatatccgttgcgacacct
accgacaaggaagttgagcgcaatcaagctcttatcgaagagttgaaaaagcaggggagc
tttgagggagcagaagagagtcagaagcgtgtcctggttttgaatactctacagaatctt
accgagggctttgtgaaaaaagtttgtgccaacaagggcatgcccgaacatatcattaaa
aattcaggggggaagatcttcacttatgggagctaccgtctgggtgtatacgcgccaggt
tctgatatcgatactctccttgttactccggcgcatattacccggcatgacttctttgca
accctccctgctatgcttcaggaattggttcccccgccggaagatctttcaatggttcct
gatgccttcgtcccgattataaagttcaaattacaatctatctccattgatttaatcttt
gcgagacttgccaacgtaaactcggttccgaaggatatggcactcagtgacaaggagctg
ctaagagggtgtgacgaagttaatcttcgttgtttaaatggcacccgggttactgatgaa
atattaactcttgttcccaaacctggtgtctttaggatggcattgagggggataaagctc
tgggcacaacggcgcgctatttatgccaacgttatgggattccccggtggtgtggcgtgg
gctatgcttgttgctaggatctgccaactttaccctatggccgttagcgcagttgtcata
agcaagttcttcaagattttggctcattggacttggcctcaaccagtccttttgaaaggt
attgaagatggtccattgagtgttcgggtctggaaccctaagatatatccttctgatcgt
ggacacctaatgcccatcattaccccagcgtatccaagtatgtgcgctactcacaacata
accaaatctaccaaatcaatcattattcgagaaatgaaacatgctgctgaaataatggac
ggtattatggtcggcaacttgagctgggataagctttttgagcgccattcattctttaca
aatggctatcggtactacttgagtgtagtcgctgctgctaaagacaaagatacgttactt
ggatggtctggccttgtggagtctaagcttcgtcacttagtcatgaagctcgagatactt
gaaaccatcaaacttgcacaccctttcaacaaaggatttgataacgttcacttttgtgag
actgaggaggaagctatccgcattgctaacggtgaaataaaagctattgataaccaagtg
ggtgtgaagacagtagtcacagatctcaaagcagagcagaatggagatgttgagaagaaa
gaagacgaatccaagtttaaagtttacaccacaacttattatgttgggttggagattaac
accgaaatttcgaagcacatcgacatatcctgggcgagccaggagttcttcgaaacttgt
aaaacctggccgtcctataacgaggatgaacacactattcatatcaatctcgcgcgcaat
tttgaacttccggataatgttttccaacctggtgagactaagccagtaaaaaaaaccaaa
aagaagatcatcaagaggaaggctggcaccgcaaatggcggatcggccacaaaaaagaga
tcagcggatgaggcttcgatcaacgatgacactaaacgtgcaaggcagacttcggtccac
cagcaacaacctgcacaggcgtag
DBGET
integrated database retrieval system
