Tuber melanosporum: GSTUM_00005528001
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Entry
GSTUM_00005528001 CDS
T01282
Name
(RefSeq) hypothetical protein
KO
K07466
replication factor A1
Organism
tml
Tuber melanosporum
Pathway
tml03030
DNA replication
tml03420
Nucleotide excision repair
tml03430
Mismatch repair
tml03440
Homologous recombination
tml03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
tml00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
GSTUM_00005528001
03420 Nucleotide excision repair
GSTUM_00005528001
03430 Mismatch repair
GSTUM_00005528001
03440 Homologous recombination
GSTUM_00005528001
03460 Fanconi anemia pathway
GSTUM_00005528001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tml03000
]
GSTUM_00005528001
03032 DNA replication proteins [BR:
tml03032
]
GSTUM_00005528001
03400 DNA repair and recombination proteins [BR:
tml03400
]
GSTUM_00005528001
Transcription factors [BR:
tml03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
GSTUM_00005528001
DNA replication proteins [BR:
tml03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
GSTUM_00005528001
DNA repair and recombination proteins [BR:
tml03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
GSTUM_00005528001
MMR (mismatch excision repair)
GSTUM_00005528001
DSBR (double strand breaks repair)
HR (homologous recombination)
GSTUM_00005528001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
tRNA_anti-codon
DUF223
CDC24_OB3
RADX
Ssb-like_OB
Motif
Other DBs
NCBI-GeneID:
9182946
NCBI-ProteinID:
XP_002837718
INRA:
GSTUM_00005528001
UniProt:
D5GBQ9
LinkDB
All DBs
AA seq
614 aa
AA seq
DB search
MANNPCTPGALQRVFEADIPTPDSFPNPILQVLQIKSLAAQPGAPERYRVVFSDTQNFIQ
SMLATQATAHVLDGSIEKGCFVQLTNYQANKVKDKKILIVIGLEVLTQYGKQEKIGEPVS
LEASQRPQAPDRARAAQNEKASATSFYGNRPAPAPAEQRGVPARQAQPTTTARSSAPSAT
RPNIYPIESLSPYQNRWTIRARVTYKSPIKLWQNSNRDGRLFNVTLLDESGEVRATGFND
QVDSFYEVLQEGQVYYISNCKVNFAKKQFSNINNDYELAFERNTEIEKCNDVDDGIPMAR
FNFVQFSELESIQNDGIIDVIGVIKEVGEVASIQSKNTQKSYTKRDVTLVDKSGYSVHIT
TWGKSAEDWETQLDEIVAFKGVKVSEYGGRSLSMLHSSTMTVNPDIDESHALRGWYDGQG
RGETFQSHHTGSSAVRTNDPYKTLSQIRDENLGMGEDPDIFTTKATIVYIKNENFSYPAC
LTPKCNKKVVEIAEGQWKCEKCDITHPNCQHRYIMTISCSDAFGLAWFSCFDDVGIMIMG
MTADELVELNNQSGGPAFADAFLQANCKAYVFRCRAKMDVSQGQQRVRYQVLNAAPVNFA
LEAHKLIGQIKLYS
NT seq
1845 nt
NT seq
+upstream
nt +downstream
nt
atggcgaacaatccctgcacccccggtgctctgcaaagggtcttcgaggcggatattccc
acacccgatagcttcccgaatcctattctccaagtgcttcaaataaaatctcttgccgct
caacctggcgccccggaacgataccgggttgtgttctcagatactcaaaatttcatccag
tcgatgcttgctacacaggcaaccgctcatgtcttggatggatcaattgagaaaggctgc
tttgtccagctgacaaactatcaggcaaataaggtcaaggataagaagatccttatcgtt
atcggactggaggtcctcacccagtacggaaagcaggagaaaattggggagcctgtttct
ttagaagcatctcaacgcccacaggcacccgatcgagctagagcggcccagaatgaaaag
gcttctgctacatcgttttacggaaatagacccgcgcctgctccagctgaacagagaggt
gttccggctagacaagcacaacccaccaccactgcacgttcttcggctccaagcgctacg
cgtccgaatatctatccgatcgagagtctctcgccttaccagaacagatggacgatcaga
gctagagtcacatacaagtctccgattaagctctggcaaaattcgaatcgtgacgggagg
ctatttaatgtcactcttttagacgagagtggcgaggttcgtgccactggatttaacgat
caagtggattcgttctatgaagtactccaggaggggcaggtttattatatttcgaactgc
aaagtcaattttgcgaagaagcagttctctaatatcaataacgattacgaattggcattc
gagcgtaacactgagattgagaagtgtaatgatgtagatgatggcattcccatggcgcgt
ttcaattttgttcaattttctgaattggagagtatccaaaacgacggcatcattgatgtt
ataggtgtcattaaggaggttggtgaggtcgcatcaattcagtcaaagaacacccaaaag
tcatacacgaagcgggatgtcactttggtcgacaagtccggatattctgtccacatcact
acctggggtaaatctgctgaggattgggagacacaactggatgagattgtggcattcaag
ggtgttaaggttagcgagtatggtggtcggagtctaagcatgctacatagctctaccatg
actgtcaatcctgacattgacgaatctcacgcgcttcgcggttggtatgacggacaggga
cgcggagagacgtttcaaagtcaccataccggctcatcagctgtccgcaccaatgaccct
tataagactttgtcacagatccgcgatgaaaacctcggtatgggagaagatcctgatatc
ttcactaccaaagcgacaatcgtttatatcaaaaacgaaaatttttcgtaccctgcttgc
ctaaccccaaaatgcaacaagaaggttgtcgaaattgctgaagggcaatggaagtgtgag
aaatgtgacattacccaccccaattgtcagcataggtatatcatgacgatttcctgtagt
gatgcctttggcttggcttggtttagttgcttcgatgatgttggaatcatgatcatggga
atgaccgcggatgagcttgttgaactcaataatcagtccggtggacctgccttcgctgat
gcgtttttgcaagcgaactgcaaagcgtacgtctttagatgtcgtgcgaagatggatgtc
tctcagggtcagcagagggtcagatatcaggttttgaatgcggcccccgttaatttcgcg
ctggaggcacacaagttgattggccagattaagctctattcttaa
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