KEGG   Tuber melanosporum: GSTUM_00005649001
Entry
GSTUM_00005649001 CDS       T01282                                 
Name
(RefSeq) hypothetical protein
  KO
K14004  protein transport protein SEC13
Organism
tml  Tuber melanosporum
Pathway
tml03013  Nucleocytoplasmic transport
tml04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:tml00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    GSTUM_00005649001
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    GSTUM_00005649001
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tml03019]
    GSTUM_00005649001
   04131 Membrane trafficking [BR:tml04131]
    GSTUM_00005649001
Messenger RNA biogenesis [BR:tml03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     GSTUM_00005649001
Membrane trafficking [BR:tml04131]
 Protein recycling
  Rab GTPases and associated proteins
   Rab11 associated proteins
    GSTUM_00005649001
 Endoplasmic reticulum (ER) - Golgi transport
  Forward pathways
   Coat protein complex II (COP-II)
    GSTUM_00005649001
 Autophagy
  Other autophagy associated proteins
   SEACAT/GATOR2 complex
    GSTUM_00005649001
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_CAF1B_HIR1 Beta-prop_EML_2 Beta-prop_TEP1_2nd WDR55 WD40_MABP1-WDR62_2nd Beta-prop_WDR35_TULP_N Beta-prop_RIG_2nd Beta-prop_IFT122_1st Beta-prop_TEP1_C ANAPC4_WD40 Beta-prop_EIPR1 Beta-prop_WDR90_POC16_2nd EIF3I Beta-prop_HPS5 Ge1_WD40 Beta-prop_EML
Other DBs
NCBI-GeneID: 9185425
NCBI-ProteinID: XP_002837799
INRA: GSTUM_00005649001
UniProt: D5GBI4
LinkDB
AA seq 390 aa
MEGHPTYDNMKRNSLQAIHLLLAYPNPGVTTSFLGSTSPELRQPHTTANTKPCGKLLSFS
LFSFFPLNYQSDNNQYIYLTMTQLSNLHDDMIHDCALDYYGKRLATCSSDKTIKIFEVDR
DNHRLLETLRGHDGPVWQISWAHPKFGTILASASYDGKVIIWQERSGSWSKLFEHANHHA
SVNSVQWAPHEAGAVLACASSDAKVSVLEFKDNGTWDTKLFAAHVIGCNAVSWAPATQPA
SLVQTTSSSASTSTATPAAQQQQHLTQRRFATGGSDNLVKIWSYSPEVGTYVEESVLEGH
QDWVRDVAWAPSILPKSYIASASQDKSVIIWTQQDGEAWTKKVLQMDTVLWRVSWSLSGN
VLAVSGGDNKVSLWKETLKEEWDKVSSVEE
NT seq 1173 nt   +upstreamnt  +downstreamnt
atggaagggcatcccacctatgataatatgaaaagaaactccctgcaagcgattcacctc
cttcttgcttaccctaatcctggagtgacaaccagctttcttggttcaacgtcgcctgaa
ctcagacagccacacacaactgcgaacacaaagccttgtgggaagcttttgtctttttct
cttttttcctttttccctttaaattatcaatcagacaataatcaatacatctatctcaca
atgactcaattatctaatcttcacgatgacatgatccatgactgcgctctggactactat
ggtaaacgtcttgctacctgctcctccgacaaaaccatcaaaatctttgaagtagaccgt
gataaccatcgtctccttgagaccctccgcggccacgacggaccagtctggcaaatctcc
tgggcccaccccaagttcggcacgatcctcgctagtgcctcctacgacgggaaagtcata
atctggcaagagcgctcaggatcgtggtcgaagctattcgagcacgcgaatcatcatgcc
tccgtgaactccgtccaatgggccccgcacgaagctggcgcagtcctcgcctgcgcctcc
tctgacgccaaagtctctgtgctagagttcaaggacaatggaacctgggacaccaagctc
ttcgctgcccacgtaatcggctgcaatgctgtatcctgggcgccagcaacccaacccgcc
agcctcgtccaaaccacatcttcctccgcctcgacctccactgccacccccgccgctcaa
cagcagcagcacctcacgcaacgcagattcgcaaccggtggttcagacaacctggtcaag
atctggtcctatagtcccgaggtcggcacctacgttgaggagtccgttcttgaggggcac
caggattgggtccgtgacgtggcatgggcaccctcaatcttgccaaagtcgtacatcgcc
agtgcgtcgcaggataagtccgtcatcatctggactcaacaggacggcgaggcgtggact
aaaaaggtgctgcagatggacacggtgctttggagggttagctggagcctttccgggaat
gtgcttgccgttagcggcggggataataaggtcagtctttggaaggaaactttgaaggag
gagtgggataaggttagtagtgttgaagagtag

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