Tuber melanosporum: GSTUM_00005721001
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Entry
GSTUM_00005721001 CDS
T01282
Name
(RefSeq) hypothetical protein
KO
K13026
ATP-dependent RNA helicase DHX57 [EC:
5.6.2.6
]
Organism
tml
Tuber melanosporum
Brite
KEGG Orthology (KO) [BR:
tml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
tml03012
]
GSTUM_00005721001
Enzymes [BR:
tml01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
GSTUM_00005721001
Translation factors [BR:
tml03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
GSTUM_00005721001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DSRM_DHX29
OB_NTP_bind
RWD
DEAD
HA2_C
UBA_DHX29
HA2_N
UBA_7
nSTAND3
ATPase
AAA_22
AAA_29
Zot
Ribonuc_red_lgN
PhoH
AAA_23
Motif
Other DBs
NCBI-GeneID:
9181307
NCBI-ProteinID:
XP_002837847
INRA:
GSTUM_00005721001
UniProt:
D5GBZ5
LinkDB
All DBs
AA seq
1303 aa
AA seq
DB search
MPPKKKSSRSSVAESPEASPPPPSPAGSSAKKSKAKPGTNKASRTTVGSKGKAPVVTSSE
AGSSASASKGGESRTLTVQQLIGGLSWTGKLPQTLFYEHCIKAGWNKPDYYVKDATKGFV
SSVTVTYSNPKSSHTESMRYTPPFEMPDGTPINLQMASALEARHFAATYALHRVSSMKNI
HMMLPPTHKSYWAIFDEIKRMEFAKNHAWMYVADPFLDKREWLAAEAAKAKALAEVKKEK
PAEVVDEKMKGWYRVPVVDMGISQRREVEGLVRKYHVWNPVGVSMTRDLMSKVVSELVRL
DFKRAHVEEACDWVKDKEEALEWLLIHVPEDDLPVRFLPGNYATGVTFSSGDLPMEYAAK
RMAPHPQLSLALLTLFQDYLSLRAAEALMQLLVYGCQKTPQGTREESLISFSDTDLWTEE
IGTLAAIWGPERFTQITPTHFKVLLSNPPIQGSKLPKKIFLEIRKPTSATWELEYPQTIP
TFTLSTEDDGDDKLSAQVKLSIIKQTAKHASTLLGEQMIFTAVDWLESNIARIVQSPGRL
CDVTSGVTGSNEDDVPPPNKASRQTFRHRNSRNSGAIDWTPGKEASMRLLATKKAKYSLP
DMQNMLQVRMRLPAWDLKEEIIGAVNDCQVTIISGETGSGKSTQAVQFILDDMIDQHLGH
ITNIICTQPRRISALGLADRVSDERCSRVGQEVGYAIRGESKQNPATTRITFVTTGVLLR
RLQMGDTLDEVTHIFVDEVHERSLDTDFLLILLKRKLAARKDLRVVLMSATLDAKIFSDY
FGGEGKVRRVEIKGRTFPVEDYYLDQMLGSHDGGILIFLPGNPITFSHSILLLTDAGTME
IQRCIEAIKTLPCGIERFHALPLHASLTPNDQRKVFPQPPSGKRKVIAATNKLHTIPPVV
SSNFSKHGPPAQHASNLYTRNAENKMAERPEPELKRVPLEQTCLAVKAMEDDVRGFLAGA
LTPPDTMAVEGAMRLLERMGAIADDDLTALGRHLVLIPADLRCSKLMVYGAIFGCLDVSV
TIASILTTRSPFINTPATRDACQLARASFAHGQGDLLADCHAHQEWTRLRQTTSVRDVKR
WCEENHLSHHTLLDISSNRAQYISSLKEIGFLPLSSSFSDFASLNQNQEYAVLHRALIAA
AFNPQIARIALPEQRFAGSASGALAVDPEARTIKYYTHSSGRAFVHPSSTLFGATGFTGD
ARFLSYFSKMETNNKVYLKDVTPTNAYSLLLFGGALEVDTTGRGITVDGWLKLRGWGRIG
ILVARLRAMLDQVLQDKIDDPGLELAGNEVVACVARLVGSNGV
NT seq
3912 nt
NT seq
+upstream
nt +downstream
nt
atgcccccgaagaaaaagagttccagatcatccgtggccgagagtccggaggcatcacca
cccccaccatcccccgcgggttcctcagcgaagaagtcgaaagcgaaaccggggacaaac
aaggctagcaggacgaccgttggatctaaggggaaagctcccgttgttactagtagtgag
gctgggagctccgcctctgcctctaagggaggtgaaagtaggacattaacggtgcagcaa
ttaatcggggggttatcctggaccgggaagttaccacagacactgttttatgagcactgt
ataaaggcaggatggaataagccggactattatgttaaggacgccacgaaaggtttcgta
tcgtcagtaacagtgacatacagcaatcccaaatccagtcacacagagtcaatgcgctat
acaccgcccttcgagatgcccgacggcactccaataaacctacagatggcctctgcactc
gaggccaggcacttcgccgctacttatgccctccaccgcgtttcctccatgaagaatatc
cacatgatgctcccgccgacacacaagagctactgggctatattcgacgagatcaagagg
atggaattcgcaaagaatcatgcgtggatgtacgttgctgacccattcctcgacaaacga
gagtggttggcggcggaagctgccaaggcgaaggccctggcggaggttaaaaaggagaag
cctgccgaggtggtcgatgagaagatgaaggggtggtatcgagttcctgttgtggacatg
gggattagtcaaaggagggaagtagaagggttggtccggaagtatcatgtttggaatccg
gttggggtcagcatgaccagggatttgatgtcgaaggtcgtttcggagcttgttaggtta
gatttcaagagggcgcatgttgaagaggcttgcgattgggtgaaggacaaggaggaagct
ttagagtggttgttaattcatgttccggaggatgaccttccggtcaggtttttgccgggg
aattatgctaccggtgtgacgttttcttctggggatctgcccatggagtacgctgctaaa
cgcatggctcctcatccacaattgtcattggcgttgctaactctgttccaggattatctg
tcactgcgtgcagcagaagctttgatgcaacttctagtttacggctgccaaaagactccc
caaggcactagggaagagtcgttgatttctttctcagataccgacctctggacagaggaa
atcggcactctggcggcaatctggggccccgagaggttcacccagattacgcccactcac
ttcaaagtgctgctttccaatccccctatacagggctcgaaattgcccaaaaagatattt
ctagagatccggaagccgacctcggcgacttgggaactagaatacccgcagacgatcccg
acattcacactttccaccgaggatgatggggacgataaattgtcggcgcaggtcaagctc
agtatcatcaagcagacagcaaagcatgcaagcactcttcttggagagcagatgatattt
acagcggtagactggctagagagcaatatcgctagaattgtccagtccccgggtagactt
tgcgatgtcactagtggtgttactggcagcaacgaagatgatgttccacccccgaacaaa
gccagcaggcaaaccttccgacatcgcaactcaagaaactctggggccattgattggact
cccggtaaagaagctagtatgcgattactcgcgaccaaaaaggccaaatactctttgccc
gatatgcaaaacatgctgcaagtacgcatgcgcctaccggcatgggatctaaaggaagaa
ataattggcgccgtgaatgattgccaggtcacgattattagcggtgagactggaagtggg
aagagtacacaggctgtccaattcatcctagacgacatgatcgaccagcatctaggacat
atcacgaatatcatatgtacccaaccccgccgtatttctgctctaggcttagcggaccga
gtcagcgatgagcgctgctcccgagtgggtcaggaagtcgggtacgcaatccgcggcgaa
tctaagcagaatcccgcaacgaccaggatcacgttcgtcaccacaggtgttctcctccgg
agactccaaatgggcgataccctcgatgaagtaacccacatattcgtcgacgaggtgcac
gagcgtagcctcgatacagacttcttgctaatcctattaaaaaggaagttggctgctcgg
aaggatctcagagtagtgctcatgagcgctactcttgatgcgaagattttctcagactat
tttggcggggagggtaaggtccgtagggtcgagattaagggtcgaacgttccccgttgag
gattactatctcgaccagatgcttggatctcatgacggagggattctaatattcctacca
ggtaatccaatcacattctctcactcgatattattgctcacggatgcagggactatggag
atccaacgatgcatcgaagctatcaagaccttgccatgtgggatagagcgctttcacgca
ctgcctcttcacgcctccctcactcccaacgaccagcgtaaggtcttcccccaaccgccc
agtggcaagcgcaaggtcatcgcagcaaccaacaaacttcatacgatccctccagtggtg
tcgtcaaacttctcgaaacatgggcctcccgcgcagcatgcaagcaacctctacacccgc
aacgcggaaaacaaaatggctgagcggcccgagccagaattaaagcgcgttccgcttgag
cagacctgtctcgcggtgaaagcgatggaagacgacgtccgcggtttcctagcgggggca
ctaacacccccggataccatggcagtagaaggcgcgatgagacttctcgagcgcatgggt
gcgatagcagacgatgatctgactgccctgggaaggcacttggttctcatcccggcggac
ctccgttgctccaagctgatggtgtacggcgccatattcggctgcttggacgtttccgtg
acgatcgctagcatactcaccacccgaagcccatttataaatacccccgcgacccgtgat
gcctgccaactcgcgcgcgcatccttcgcccacgggcaaggggaccttttagcggactgt
cacgcccaccaggaatggacgcgcctccgccaaacaacctcagtcagggacgtcaagcgt
tggtgcgaagagaaccatctaagccaccatacacttctcgacatatcctcgaatcgagca
cagtacatttcctccctgaaggaaatcgggttcctcccactctcatcttcattcagcgat
ttcgcaagtctaaatcaaaaccaagaatacgctgtcctccacagagcgctcatcgccgcg
gccttcaacccgcagattgcgaggattgcattaccggagcagagattcgcggggtccgct
agcggcgcgttagctgtagacccggaggcgaggacaatcaagtactatacgcactcctcc
ggccgcgcctttgtccatccttcttccacgctcttcggcgcaaccggtttcaccggcgac
gctaggttcttgagctacttttcgaaaatggaaactaacaataaagtctatctcaaagac
gttacaccgacaaacgcatactccctcctcctctttggcggtgcactagaagtcgatact
acggggcgcggtatcacggtcgatggatggctcaagttgcgagggtggggaaggatcggg
attctggtcgctaggctgcgcgccatgcttgaccaggtgttgcaggacaagattgacgac
ccgggcttggagctcgctgggaacgaagttgtggcttgtgtggcgaggttggtcgggagt
aatggggtgtga
DBGET
integrated database retrieval system
