Tuber melanosporum: GSTUM_00005757001
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Entry
GSTUM_00005757001 CDS
T01282
Name
(RefSeq) hypothetical protein
KO
K11360
transcriptional activator SPT8
Organism
tml
Tuber melanosporum
Brite
KEGG Orthology (KO) [BR:
tml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tml03021
]
GSTUM_00005757001
03036 Chromosome and associated proteins [BR:
tml03036
]
GSTUM_00005757001
Transcription machinery [BR:
tml03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
GSTUM_00005757001
Chromosome and associated proteins [BR:
tml03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
GSTUM_00005757001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_SPT8
WD40
Beta-prop_EML_2
WD40_WDHD1_1st
WD40_CDC20-Fz
WD40_Prp19
WDR55
Beta-prop_TEP1_2nd
WD40_RFWD3
EIF3I
Beta-prop_HPS5
Beta-prop_DCAF4
Beta-prop_EML
Beta-prop_WDR75_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_SCAP
NBCH_WD40
Beta-prop_CAF1B_HIR1
Beta-prop_RIG_2nd
WD40_2
Gamma_PGA_hydro
Motif
Other DBs
NCBI-GeneID:
9181324
NCBI-ProteinID:
XP_002837864
INRA:
GSTUM_00005757001
UniProt:
D5GC12
LinkDB
All DBs
AA seq
564 aa
AA seq
DB search
MEDPELEYDDSDDARYDDEDTEWDSGEDCQEDGYEDGTENEGRGGEGDGDGDGMCSPRLT
PTQPQPEAIPTERPDSQPHTRSGSTGQPPLRPLPILRPEAKNATTYEITPYVAAPQSTSI
NAFCATPCMRWVFTGGSDGYIRRFDWFGSINGKVPLTVAQRHQFTDSATRAGVLLSYWGN
EEPIELSPVYSLAVQNQSLWLLSGLKSGGINLQSVRHDEGKIITTLRKHNSAVSVLTLAS
DEKSVLSGGWDGAIYDWDLNTGQSRREFPSSSGQISSIAFRPISTESQEIRNTPLINGVS
RAGDKGLSNGTCTREEDEMSRAITNGVCSDPPPPENFREDQRTNNGDTIMTNGVTRIHTD
ETSGTRNGSANGSLGTSNDFLPPASTDWPPSSTDKNVFLASSMDGTLRIWDIRKPNPIAV
STPSTGVPPWCMDSCWSRDGNFIYAGRRNGTVEEFSAHKGIGETTRIMKFPLGSGPVSAL
APLPNGRHLICASFDNLRLYDLSEDASRHSTLPFYIIPGHHGGVISSLYVDATGQYLISN
AGNRGWGGTTTEALLGYEIVSVLS
NT seq
1695 nt
NT seq
+upstream
nt +downstream
nt
atggaagacccggaactggaatacgacgactcggacgacgcaagatatgatgatgaggac
acggagtgggacagtggggaggactgtcaagaagacggctatgaggatgggaccgagaat
gaaggcagaggtggtgaaggtgacggtgacggcgatggtatgtgctctcccagactgact
cccactcaacctcaacccgaagccataccaactgagcgaccagattcacagccacacacc
cgctccgggtctacaggccagcccccgcttcgcccactacccattctcagacccgaagcg
aagaatgcaaccacctacgagatcacaccctatgtcgcagctcctcagtctacgagcata
aatgccttttgcgctacgccttgtatgcgttgggtgtttaccggcggtagtgatggctat
attaggcgattcgactggtttgggagcattaatggcaaagtgcccttgacagttgcacag
cgtcaccaattcactgacagtgcaacaagagctggagttctgttgtcttattggggaaac
gaggaaccaatagaattaagcccagtctacagtctggctgttcaaaatcagagcctatgg
ctgctcagtggacttaagagtggcggcataaacctccaatcggttcgacacgacgaagga
aaaattataaccacactccggaaacacaactcggctgtcagcgtgcttacacttgccagc
gatgagaagtctgttctttctggaggttgggacggagcaatctacgactgggatctaaat
actggtcaatcccgccgagaatttccctcttcctcaggccagatatcaagtatagccttc
cggccaatatccaccgaatctcaagagatcaggaacactcctttgatcaacggtgtatct
cgagctggagacaagggtttatccaatggtacctgcacgagggaagaggatgagatgagt
agagctattacaaacggggtctgcagtgatccgccccccccagagaattttagggaggac
caaagaaccaacaatggtgatacgatcatgaccaacggtgtcactagaatacacaccgat
gagacatccggaaccagaaatggttccgctaacggcagtcttgggacttctaatgacttc
cttccacccgcatcgactgactggccaccatcctcgaccgacaagaatgtgttcctagca
tcttccatggatggcacccttcgtatatgggacatcagaaagcccaaccctatagcagtc
agcactccctccacaggagttccaccttggtgcatggactcttgctggagcagggacggg
aactttatctatgcgggacgacgaaacggcacagttgaagaattcagcgcccataaaggg
atcggggaaacaacgaggataatgaagttcccattgggaagtggtccagtatctgcactg
gcccctttgccgaacggaaggcatttaatttgcgcatcattcgacaacctacgattatac
gaccttagtgaggatgcatcgaggcactcgactctaccgttctatattatcccgggtcac
cacggaggtgttatttcatcattatatgtcgatgctaccggccaatacctaatatcgaat
gccggaaaccgagggtgggggggtacaacaacagaagcccttctaggttatgagattgtg
agcgtattatcctaa
DBGET
integrated database retrieval system