KEGG   Tuber melanosporum: GSTUM_00005757001
Entry
GSTUM_00005757001 CDS       T01282                                 
Name
(RefSeq) hypothetical protein
  KO
K11360  transcriptional activator SPT8
Organism
tml  Tuber melanosporum
Brite
KEGG Orthology (KO) [BR:tml00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:tml03021]
    GSTUM_00005757001
   03036 Chromosome and associated proteins [BR:tml03036]
    GSTUM_00005757001
Transcription machinery [BR:tml03021]
 Eukaryotic type
  RNA polymerase II system
   Coactivators
    SAGA/TFTC/STAGA complex
     GSTUM_00005757001
Chromosome and associated proteins [BR:tml03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    SAGA complex
     GSTUM_00005757001
SSDB
Motif
Pfam: Beta-prop_SPT8 WD40 Beta-prop_EML_2 WD40_WDHD1_1st WD40_CDC20-Fz WD40_Prp19 WDR55 Beta-prop_TEP1_2nd WD40_RFWD3 EIF3I Beta-prop_HPS5 Beta-prop_DCAF4 Beta-prop_EML Beta-prop_WDR75_1st Beta-prop_WDR90_POC16_2nd Beta-prop_SCAP NBCH_WD40 Beta-prop_CAF1B_HIR1 Beta-prop_RIG_2nd WD40_2 Gamma_PGA_hydro
Other DBs
NCBI-GeneID: 9181324
NCBI-ProteinID: XP_002837864
INRA: GSTUM_00005757001
UniProt: D5GC12
LinkDB
AA seq 564 aa
MEDPELEYDDSDDARYDDEDTEWDSGEDCQEDGYEDGTENEGRGGEGDGDGDGMCSPRLT
PTQPQPEAIPTERPDSQPHTRSGSTGQPPLRPLPILRPEAKNATTYEITPYVAAPQSTSI
NAFCATPCMRWVFTGGSDGYIRRFDWFGSINGKVPLTVAQRHQFTDSATRAGVLLSYWGN
EEPIELSPVYSLAVQNQSLWLLSGLKSGGINLQSVRHDEGKIITTLRKHNSAVSVLTLAS
DEKSVLSGGWDGAIYDWDLNTGQSRREFPSSSGQISSIAFRPISTESQEIRNTPLINGVS
RAGDKGLSNGTCTREEDEMSRAITNGVCSDPPPPENFREDQRTNNGDTIMTNGVTRIHTD
ETSGTRNGSANGSLGTSNDFLPPASTDWPPSSTDKNVFLASSMDGTLRIWDIRKPNPIAV
STPSTGVPPWCMDSCWSRDGNFIYAGRRNGTVEEFSAHKGIGETTRIMKFPLGSGPVSAL
APLPNGRHLICASFDNLRLYDLSEDASRHSTLPFYIIPGHHGGVISSLYVDATGQYLISN
AGNRGWGGTTTEALLGYEIVSVLS
NT seq 1695 nt   +upstreamnt  +downstreamnt
atggaagacccggaactggaatacgacgactcggacgacgcaagatatgatgatgaggac
acggagtgggacagtggggaggactgtcaagaagacggctatgaggatgggaccgagaat
gaaggcagaggtggtgaaggtgacggtgacggcgatggtatgtgctctcccagactgact
cccactcaacctcaacccgaagccataccaactgagcgaccagattcacagccacacacc
cgctccgggtctacaggccagcccccgcttcgcccactacccattctcagacccgaagcg
aagaatgcaaccacctacgagatcacaccctatgtcgcagctcctcagtctacgagcata
aatgccttttgcgctacgccttgtatgcgttgggtgtttaccggcggtagtgatggctat
attaggcgattcgactggtttgggagcattaatggcaaagtgcccttgacagttgcacag
cgtcaccaattcactgacagtgcaacaagagctggagttctgttgtcttattggggaaac
gaggaaccaatagaattaagcccagtctacagtctggctgttcaaaatcagagcctatgg
ctgctcagtggacttaagagtggcggcataaacctccaatcggttcgacacgacgaagga
aaaattataaccacactccggaaacacaactcggctgtcagcgtgcttacacttgccagc
gatgagaagtctgttctttctggaggttgggacggagcaatctacgactgggatctaaat
actggtcaatcccgccgagaatttccctcttcctcaggccagatatcaagtatagccttc
cggccaatatccaccgaatctcaagagatcaggaacactcctttgatcaacggtgtatct
cgagctggagacaagggtttatccaatggtacctgcacgagggaagaggatgagatgagt
agagctattacaaacggggtctgcagtgatccgccccccccagagaattttagggaggac
caaagaaccaacaatggtgatacgatcatgaccaacggtgtcactagaatacacaccgat
gagacatccggaaccagaaatggttccgctaacggcagtcttgggacttctaatgacttc
cttccacccgcatcgactgactggccaccatcctcgaccgacaagaatgtgttcctagca
tcttccatggatggcacccttcgtatatgggacatcagaaagcccaaccctatagcagtc
agcactccctccacaggagttccaccttggtgcatggactcttgctggagcagggacggg
aactttatctatgcgggacgacgaaacggcacagttgaagaattcagcgcccataaaggg
atcggggaaacaacgaggataatgaagttcccattgggaagtggtccagtatctgcactg
gcccctttgccgaacggaaggcatttaatttgcgcatcattcgacaacctacgattatac
gaccttagtgaggatgcatcgaggcactcgactctaccgttctatattatcccgggtcac
cacggaggtgttatttcatcattatatgtcgatgctaccggccaatacctaatatcgaat
gccggaaaccgagggtgggggggtacaacaacagaagcccttctaggttatgagattgtg
agcgtattatcctaa

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